AutismKB 2.0

Annotation Detail for SCARB1


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Basic Information Top
Gene Symbol:SCARB1 ( CD36L1,CLA-1,CLA1,MGC138242,SR-BI,SRB1 )
Gene Full Name: scavenger receptor class B, member 1
Band: 12q24.31
Quick LinksEntrez ID:949; OMIM: 601040; Uniprot ID:SCRB1_HUMAN; ENSEMBL ID: ENSG00000073060; HGNC ID: 1664
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
102N-linked (GlcNAc...).
108N-linked (GlcNAc...) (Potential).
173N-linked (GlcNAc...) (Potential).
212N-linked (GlcNAc...) (Potential).
227N-linked (GlcNAc...) (Potential).
255N-linked (GlcNAc...) (Potential).
310N-linked (GlcNAc...) (Potential).
330N-linked (GlcNAc...).
383N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
102N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
108N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
173N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
212N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
227N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
255N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
310N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
330N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
383N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
108N-linkedHMM predict
129Phosphoserine(CK2)HMM predict
133Phosphotyrosine(Syk)HMM predict
133Phosphotyrosine(SRC)HMM predict
133Phosphotyrosine(INSR)HMM predict
173N-linkedHMM predict
212N-linkedHMM predict
213N-linkedHMM predict
227N-linkedHMM predict
255N-linkedHMM predict
267Phosphothreonine(CDC2)HMM predict
267Phosphothreonine(CDK)HMM predict
298Phosphothreonine(PKC)HMM predict
310N-linkedHMM predict
323S-palmitoylHMM predict
330N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005505
  • Location:chr12 123828128-123914286
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 123916072 123916316 244 1908
CTCF G2GSE9613 123925571 123925916 345 11457
CTCF G2GSE9613 123929357 123929566 209 15175
CTCF G2GSE9613 123930405 123930713 308 16273
FOXA1 MCF7GSE15244 123916206 123916490 284 2062
FoxA1 MCF7MACSdata 123916282 123916471 189 2090
H3ac HepG2E 123925999 123926221 222 11824
H3ac HepG2E 123931452 123932165 713 17522
PHF8 HeLaGSE20725 123913834 123915079 1245 170
TFAP2C MCF7GSE21234 123916055 123916858 803 2170
TFAP2C MCF7GSE21234 123933894 123934570 676 19946
hScc1 BcellGSE12603 123919079 123919318 239 4912
hScc1 G2GSE9613 123913843 123914789 946 30
p130 shRbQuiescentGSE19898 123914540 123914933 393 450
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 123817570 123817904 334 10392
CTCF CD4GSE12889 123822418 123822609 191 5615
CTCF CD4SISSRdata 123817570 123817904 334 10392
CTCF CD4SISSRdata 123822418 123822609 191 5615
CTCF JurkatGSE12889 123822338 123822685 347 5617
CTCF G2GSE9613 123808633 123809113 480 19256
CTCF G2GSE9613 123809784 123810725 941 17874
CTCF G2GSE9613 123811078 123811517 439 16831
CTCF G2GSE9613 123812430 123812716 286 15556
CTCF G2GSE9613 123814722 123815523 801 13006
CTCF G2GSE9613 123817186 123818295 1109 10388
CTCF G2GSE9613 123822163 123823440 1277 5327
CTCF G2GSE9613 123827920 123828185 265 76
FOXA1 MCF7GSE15244 123814862 123815174 312 13111
FOXA1 MCF7GSE15244 123822163 123822380 217 5857
NFkBII GM12878GSE19485 123824088 123826433 2345 2868
NRSF pAbJurkat 123811294 123811517 223 16723
P300 T30-glioblastomaGSE21026 123825981 123826668 687 1804
RARA MCF7GSE15244 123814800 123815377 577 13040
RARA MCF7GSE15244 123822163 123822380 217 5857
RARG MCF7GSE15244 123814758 123815416 658 13042
RARG MCF7GSE15244 123822163 123822331 168 5882
hScc1 BcellGSE12603 123814722 123815487 765 13024
hScc1 BcellGSE12603 123817186 123817998 812 10537
hScc1 BcellGSE12603 123822163 123823119 956 5488
hScc1 CdLSGSE12603 123814722 123815174 452 13181
hScc1 CdLSGSE12603 123817186 123818069 883 10501
hScc1 CdLSGSE12603 123822163 123822855 692 5620
hScc1 G2GSE9613 123811078 123811517 439 16831
hScc1 G2GSE9613 123814722 123815416 694 13060
hScc1 G2GSE9613 123817186 123818295 1109 10388
hScc1 G2GSE9613 123822163 123823482 1319 5306
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 123888612 123889370 758 0
CTCF G2GSE9613 123828582 123829337 755 0
CTCF G2GSE9613 123829759 123829938 179 0
CTCF G2GSE9613 123831189 123831545 356 0
CTCF G2GSE9613 123831819 123832072 253 0
CTCF G2GSE9613 123834730 123835092 362 0
CTCF G2GSE9613 123835660 123836062 402 0
CTCF G2GSE9613 123837725 123837967 242 0
CTCF G2GSE9613 123842751 123842924 173 0
CTCF G2GSE9613 123845484 123845688 204 0
CTCF G2GSE9613 123850048 123850449 401 0
CTCF G2GSE9613 123851190 123851399 209 0
CTCF G2GSE9613 123855052 123855423 371 0
CTCF G2GSE9613 123860169 123861047 878 0
CTCF G2GSE9613 123862363 123862715 352 0
CTCF G2GSE9613 123863111 123863345 234 0
CTCF G2GSE9613 123864357 123865248 891 0
CTCF G2GSE9613 123865491 123865814 323 0
CTCF G2GSE9613 123867254 123867472 218 0
CTCF G2GSE9613 123869660 123870273 613 0
CTCF G2GSE9613 123870885 123871208 323 0
CTCF G2GSE9613 123884117 123884421 304 0
CTCF G2GSE9613 123886577 123886903 326 0
CTCF G2GSE9613 123893082 123893950 868 0
CTCF G2GSE9613 123904198 123905014 816 0
CTCF G2GSE9613 123905258 123905686 428 0
CTCF G2GSE9613 123906308 123906775 467 0
CTCF G2GSE9613 123907871 123908890 1019 0
CTCF G2GSE9613 123910809 123910968 159 0
CTCF G2GSE9613 123913244 123914912 1668 0
ER MCF7GSE19013 123888630 123889202 572 0
ER MCF7GSE19013 123897483 123898096 613 0
FOXA1 DLD1GSE12801 123846914 123847244 330 0
FOXA1 DLD1GSE12801 123878205 123878710 505 0
FOXA1 MCF7GSE15244 123878178 123878807 629 0
FOXA1 MCF7GSE15244 123888676 123888880 204 0
FOXA1 MCF7GSE15244 123890198 123890481 283 0
Fos K562GSE19551 123854423 123855002 579 0
Fos K562GSE19551 123901388 123901855 467 0
H3ac HepG2E 123879210 123880039 829 0
H3ac HepG2E 123890198 123890481 283 0
H3ac HepG2E 123912029 123913808 1779 0
HIF1 HypoHepG2 123888676 123889203 527 0
NRSF pAbJurkat 123856612 123856898 286 0
NRSF pAbJurkat 123864872 123865647 775 0
NRSF pAbJurkat 123881930 123882172 242 0
NRSF pAbJurkat 123892007 123892291 284 0
Nanog hESGSE18292 123873776 123874056 280 0
P300 T30-glioblastomaGSE21026 123888438 123889546 1108 0
RARA MCF7GSE15244 123878245 123880356 2111 0
RARA MCF7GSE15244 123888676 123889203 527 0
RARG MCF7GSE15244 123847839 123848099 260 0
RARG MCF7GSE15244 123878143 123880388 2245 0
RARG MCF7GSE15244 123888676 123889203 527 0
TFAP2C MCF7GSE21234 123878060 123878603 543 0
TFAP2C MCF7GSE21234 123878898 123879511 613 0
TFAP2C MCF7GSE21234 123888460 123889407 947 0
TFAP2C MCF7GSE21234 123902552 123903142 590 0
USF1 HepG2E 123901194 123902057 863 0
USF2 HepG2E 123901194 123902082 888 0
hScc1 BcellGSE12603 123831712 123832072 360 0
hScc1 BcellGSE12603 123835704 123836062 358 0
hScc1 BcellGSE12603 123845484 123845647 163 0
hScc1 BcellGSE12603 123855020 123855314 294 0
hScc1 BcellGSE12603 123858587 123858995 408 0
hScc1 BcellGSE12603 123878106 123878393 287 0
hScc1 BcellGSE12603 123890198 123890481 283 0
hScc1 BcellGSE12603 123905516 123905758 242 0
hScc1 BcellGSE12603 123906453 123906985 532 0
hScc1 BcellGSE12603 123913244 123914983 1739 0
hScc1 CdLSGSE12603 123865530 123865814 284 0
hScc1 CdLSGSE12603 123913808 123914566 758 0
hScc1 G2GSE9613 123856612 123856793 181 0
hScc1 G2GSE9613 123862436 123862715 279 0
p130 shRbQuiescentGSE19898 123837010 123837351 341 0
p63 keratinocytesGSE17611 123852670 123853496 826 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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