AutismKB 2.0

Annotation Detail for TBX4


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Basic Information Top
Gene Symbol:TBX4 ( SPS )
Gene Full Name: T-box 4
Band: 17q23.2
Quick LinksEntrez ID:9496; OMIM: 601719; Uniprot ID:TBX4_HUMAN; ENSEMBL ID: ENSG00000121075; HGNC ID: 11603
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
8Phosphoserine(CK2)HMM predict
46O-linkedHMM predict
46Phosphoserine(IKK)HMM predict
113Phosphotyrosine(Jak)HMM predict
228O-linkedHMM predict
252Phosphoserine(CK2)HMM predict
281Phosphoserine(MAPK)HMM predict
281Phosphoserine(CDK)HMM predict
287O-linkedHMM predict
353Phosphoserine(PKG)HMM predict
360Phosphoserine(ATM)HMM predict
373Phosphotyrosine(Abl)HMM predict
397Phosphoserine(ATM)HMM predict
424Phosphoserine(CDC2)HMM predict
433O-linkedHMM predict
457Phosphothreonine(PKA)HMM predict
459O-linkedHMM predict
463Phosphoserine(ATM)HMM predict
480Phosphoserine(ATM)HMM predict
528Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_018488
  • Location:chr17 56888588-56916444
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 56883774 56883988 214 4708
CTCF G2GSE9613 56886546 56887103 557 1764
CTCF G2GSE9613 56887592 56887873 281 856
Fos K562GSE19551 56875743 56876090 347 12672
Oct1 H2O2-HelaGSE14283 56871895 56871932 37 16675
Oct1 HelaGSE14283 56871895 56871932 37 16675
Oct1 HelaGSE14283 56881517 56881551 34 7055
RARA MCF7GSE15244 56871451 56872606 1155 16560
RARA MCF7GSE15244 56874608 56875266 658 13652
RARA MCF7GSE15244 56879055 56879962 907 9080
RARA MCF7GSE15244 56881595 56883431 1836 6076
RARG MCF7GSE15244 56871853 56872752 899 16286
RARG MCF7GSE15244 56873054 56873618 564 15253
RARG MCF7GSE15244 56874537 56875302 765 13669
RARG MCF7GSE15244 56876140 56877235 1095 11901
RARG MCF7GSE15244 56879193 56879962 769 9011
RARG MCF7GSE15244 56881595 56883360 1765 6111
hScc1 BcellGSE12603 56884427 56884747 320 4002
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 56929956 56929988 32 13528
RARA MCF7GSE15244 56922175 56923083 908 6185
RARA MCF7GSE15244 56927748 56928889 1141 11874
RARG MCF7GSE15244 56917446 56918729 1283 1643
RARG MCF7GSE15244 56919388 56920214 826 3357
RARG MCF7GSE15244 56921815 56923118 1303 6022
RARG MCF7GSE15244 56927024 56928663 1639 11399
RARG MCF7GSE15244 56930604 56931029 425 14372
RARG MCF7GSE15244 56934021 56934270 249 17701
p130 shRbSenescentGSE19898 56922661 56922894 233 6333
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 56888477 56888877 400 0
ER E2-MCF7GSE14664 56892685 56892737 52 0
RARA MCF7GSE15244 56899613 56901824 2211 0
RARA MCF7GSE15244 56902140 56902813 673 0
RARA MCF7GSE15244 56906202 56907716 1514 0
RARA MCF7GSE15244 56908228 56908628 400 0
RARG MCF7GSE15244 56892292 56893367 1075 0
RARG MCF7GSE15244 56896700 56897593 893 0
RARG MCF7GSE15244 56897896 56898580 684 0
RARG MCF7GSE15244 56899689 56902599 2910 0
RARG MCF7GSE15244 56902960 56903380 420 0
RARG MCF7GSE15244 56906092 56908628 2536 0
RARG MCF7GSE15244 56912907 56913256 349 0
RARG MCF7GSE15244 56914837 56916373 1536 0
Rb QuiescentGSE19898 56899945 56900133 188 0
USF2 HepG2E 56892864 56893440 576 0
hScc1 BcellGSE12603 56908774 56909138 364 0
p130 SenescentGSE19898 56906659 56906846 187 0
p63 keratinocytesGSE17611 56906424 56907653 1229 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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