AutismKB 2.0

Annotation Detail for SCARB2


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Basic Information Top
Gene Symbol:SCARB2 ( AMRF,CD36L2,HLGP85,LIMPII,SR-BII )
Gene Full Name: scavenger receptor class B, member 2
Band: 4q21.1
Quick LinksEntrez ID:950; OMIM: 602257; Uniprot ID:SCRB2_HUMAN; ENSEMBL ID: ENSG00000138760; HGNC ID: 1665
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
45N-linked (GlcNAc...).
68N-linked (GlcNAc...).
105N-linked (GlcNAc...).
206N-linked (GlcNAc...).
224N-linked (GlcNAc...) (Potential).
249N-linked (GlcNAc...).
304N-linked (GlcNAc...).
325N-linked (GlcNAc...).
412N-linked (GlcNAc...).
430N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
45N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
68N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
105N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
206N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
224N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
249N-linked (GlcNAc...).Swiss-Prot 53.0
304N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
325N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
412N-linked (GlcNAc...).Swiss-Prot 53.0
430N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
45N-linkedHMM predict
68N-linkedHMM predict
71N-linkedHMM predict
105N-linkedHMM predict
124Phosphoserine(ATM)HMM predict
124Phosphoserine(IKK)HMM predict
186Phosphoserine(CK1)HMM predict
206N-linkedHMM predict
209N-linkedHMM predict
222Phosphotyrosine(EGFR)HMM predict
222Phosphotyrosine(Syk)HMM predict
224N-linkedHMM predict
249N-linkedHMM predict
284Phosphotyrosine(Syk)HMM predict
284Phosphotyrosine(INSR)HMM predict
325N-linkedHMM predict
331N-linkedHMM predict
351Phosphoserine(PKG)HMM predict
412N-linkedHMM predict
427Phosphoserine(PKB)HMM predict
430N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005506
  • Location:chr4 77298917-77354058
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 77359225 77359971 746 5540
H3ac HepG2E 77354441 77354848 407 586
P300 T30-glioblastomaGSE21026 77359248 77360001 753 5566
Rb QuiescentGSE19898 77354520 77354664 144 534
TFAP2C MCF7GSE21234 77370320 77370826 506 16515
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 77294801 77294832 31 4101
Oct1 HelaGSE14283 77294801 77294833 32 4101
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 77319958 77320335 377 0
CTCF CD4SISSRdata 77319958 77320335 377 0
CTCF G2GSE9613 77319649 77320315 666 0
CTCF G2GSE9613 77326160 77326675 515 0
CTCF G2GSE9613 77353055 77354405 1350 0
FOXA1 MCF7GSE15244 77348423 77349003 580 0
FOXA1 eGFPGSE10845 77348423 77349003 580 0
FoxA1 MCF7MACSdata 77348627 77348862 235 0
H3K4me2 HCT116GSE10453 77351901 77352557 656 0
H3K4me3 colorectalcancer 77351901 77353191 1290 0
H3ac HepG2E 77349855 77350104 249 0
H3ac HepG2E 77351901 77353552 1651 0
Myc K562GSE19551 77320105 77320359 254 0
PHF8 HeLaGSE20725 77353165 77354741 1576 0
Rb SenescentGSE19898 77348578 77348890 312 0
TFAP2C MCF7GSE21234 77340888 77341520 632 0
USF1 HepG2E 77340801 77341357 556 0
hScc1 BcellGSE12603 77319747 77320359 612 0
hScc1 BcellGSE12603 77339821 77340330 509 0
hScc1 BcellGSE12603 77353552 77354548 996 0
hScc1 CdLSGSE12603 77319720 77320765 1045 0
p130 SenescentGSE19898 77334452 77334856 404 0
p130 SenescentGSE19898 77353261 77353514 253 0
p130 SenescentGSE19898 77353586 77353813 227 0
p130 shRbQuiescentGSE19898 77348532 77349236 704 0
p130 shRbQuiescentGSE19898 77353296 77353850 554 0
p130 shRbSenescentGSE19898 77334490 77334902 412 0
p130 shRbSenescentGSE19898 77353428 77353777 349 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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