Annotation Detail for TBPL1
Basic Information Top
| Gene Symbol: | TBPL1 ( MGC:8389,MGC:9620,STUD,TLF,TLP,TRF2 ) |
|---|---|
| Gene Full Name: | TBP-like 1 |
| Band: | 6q23.2 |
| Quick Links | Entrez ID:9519; OMIM: 605521; Uniprot ID:TBPL1_HUMAN; ENSEMBL ID: ENSG00000028839; HGNC ID: 11589 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 24 | S-palmitoyl | HMM predict |
| 59 | O-linked | HMM predict |
| 73 | Phosphoserine(CK2) | HMM predict |
| 158 | O-linked | HMM predict |
| 175 | Phosphotyrosine(EGFR) | HMM predict |
- RefSeq ID: NM_004865
- Location:chr6 134315993-134350319
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 134315432 | 134316348 | 916 | 104 |
| H3K4me3 | colorectal | cancer | 134314559 | 134314877 | 318 | 1276 |
| PHF8 | 293T | GSE20725 | 134314614 | 134316644 | 2030 | 365 |
| p130 | Quiescent | GSE19898 | 134315638 | 134316294 | 656 | 28 |
| p130 | Senescent | GSE19898 | 134315764 | 134316156 | 392 | 34 |
| p130 | shRbQuiescent | GSE19898 | 134315714 | 134316249 | 535 | 12 |
| p130 | shRbSenescent | GSE19898 | 134315761 | 134316189 | 428 | 19 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | E2-MCF7 | GSE14664 | 134347800 | 134347837 | 37 | 0 |
| H3K4me2 | HCT116 | GSE10453 | 134316793 | 134317533 | 740 | 0 |
| H3K4me3 | colorectal | cancer | 134316386 | 134317399 | 1013 | 0 |
| H3ac | HepG2 | E | 134316465 | 134318048 | 1583 | 0 |
| Oct1 | Hela | GSE14283 | 134318741 | 134318779 | 38 | 0 |
| Oct1 | Hela | GSE14283 | 134345235 | 134345267 | 32 | 0 |
| Oct1 | Hela | GSE14283 | 134345327 | 134345363 | 36 | 0 |
| RUNX | Jurkat | GSE17954 | 134338291 | 134338356 | 65 | 0 |
| Rb | Growing | GSE19898 | 134315806 | 134316181 | 375 | 0 |
| Rb | Growing | GSE19898 | 134324992 | 134325170 | 178 | 0 |
| Rb | Senescent | GSE19898 | 134315996 | 134316317 | 321 | 0 |
| Rb | shRbQuiescent | GSE19898 | 134315885 | 134316213 | 328 | 0 |
| TAF | k562 | GSE8489 | 134316515 | 134321849 | 5334 | 0 |
| TAF | k562 | GSE8489 | 134324635 | 134325230 | 595 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23198 | mRNA | TBPL1 | chr6 | 134315993 | 134350322 | 359 | mRNA | SLC2A12 | chr6 | 134349963 | 134415466 | Sense/Antisense (SA) pairs |