AutismKB 2.0

Annotation Detail for CD38


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Basic Information Top
Gene Symbol:CD38 ( T10 )
Gene Full Name: CD38 molecule
Band: 4p15.32
Quick LinksEntrez ID:952; OMIM: 107270; Uniprot ID:CD38_HUMAN; ENSEMBL ID: ENSG00000004468; HGNC ID: 1667
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
100N-linked (GlcNAc...).
164N-linked (GlcNAc...) (Potential).
209N-linked (GlcNAc...).
219N-linked (GlcNAc...).
Location(AA) Modifications Resource
100N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
164N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
209N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
219N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
15S-palmitoylHMM predict
16S-palmitoylHMM predict
51Phosphoserine(IKK)HMM predict
56Phosphothreonine(PKC)HMM predict
100N-linkedHMM predict
106PhosphotyrosineHMM predict
106Phosphotyrosine(Syk)HMM predict
106SulfotyrosineHMM predict
164N-linkedHMM predict
169N-linkedHMM predict
209N-linkedHMM predict
219N-linkedHMM predict
290AsparagineHMM predict
295Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001775
  • Location:chr4 15389028-15459803
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 15369829 15370036 207 19096
CTCF G2GSE9613 15383436 15383653 217 5484
Oct1 HelaGSE14283 15385369 15385411 42 3639
VDR GM10855-stimGSE22484 15381344 15383319 1975 6697
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 15472852 15473106 254 13176
NFkBII GM12878GSE19485 15479012 15480503 1491 19954
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 15389081 15389748 667 0
CTCF G2GSE9613 15416413 15416753 340 0
CTCF G2GSE9613 15417110 15417465 355 0
CTCF G2GSE9613 15458932 15459079 147 0
TAF HelaGSE8489 15427226 15427648 422 0
hScc1 BcellGSE12603 15388974 15390238 1264 0
hScc1 BcellGSE12603 15416336 15416753 417 0
hScc1 G2GSE9613 15416413 15417465 1052 0
p63 keratinocytesGSE17611 15458337 15459579 1242 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-129* hsa-mir-129-1 7 18189265
hsa-miR-129-3p hsa-mir-129-2 11 18189265
hsa-miR-129-5p hsa-mir-129-1 7 18189265
hsa-miR-129-5p hsa-mir-129-2 11 18189265
hsa-miR-182 hsa-mir-182 7 20227111
hsa-miR-182* hsa-mir-182 7 20227111
hsa-miR-23b hsa-mir-23b 9 18549635
hsa-miR-23b* hsa-mir-23b 9 18549635
hsa-miR-520h hsa-mir-520h 19 18189265
hsa-miR-584 hsa-mir-584 5 20227111
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
19453 mRNA CD38 chr4 15456199 15526975 340 mRNA chr4 15455455 15456944Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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