AutismKB 2.0

Annotation Detail for IGDCC3


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Basic Information Top
Gene Symbol:IGDCC3 ( HsT18880,PUNC )
Gene Full Name: immunoglobulin superfamily, DCC subclass, member 3
Band: 15q22.31
Quick LinksEntrez ID:9543; OMIM: 604184; Uniprot ID:IGDC3_HUMAN; ENSEMBL ID: ENSG00000174498; HGNC ID: 9700
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
93N-linked (GlcNAc...) (Potential).
246N-linked (GlcNAc...) (Potential).
381N-linked (GlcNAc...) (Potential).
382N-linked (GlcNAc...) (Potential).
580N-linked (GlcNAc...) (Potential).
604N-linked (GlcNAc...) (Potential).
634N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004884
  • Location:chr15 63407841-63457378
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 63398263 63398554 291 9433
CTCF CD4SISSRdata 63398263 63398554 291 9433
CTCF G2GSE9613 63398004 63398504 500 9588
CTCF G2GSE9613 63401457 63401627 170 6300
Myc K562GSE19551 63398115 63398522 407 9523
STAT1 IFNSISSRdata 63398190 63398679 489 9407
TFAP2C MCF7GSE21234 63402455 63403044 589 5092
hScc1 BcellGSE12603 63398004 63398504 500 9588
hScc1 CdLSGSE12603 63397967 63398504 537 9606
p130 QuiescentGSE19898 63389467 63389695 228 18261
p130 QuiescentGSE19898 63398294 63398481 187 9454
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 63414150 63414537 387 0
CTCF G2GSE9613 63415325 63415515 190 0
CTCF G2GSE9613 63423107 63423263 156 0
CTCF G2GSE9613 63435296 63435466 170 0
CTCF G2GSE9613 63440874 63441527 653 0
CTCF G2GSE9613 63444603 63444879 276 0
CTCF G2GSE9613 63456348 63457348 1000 0
ER E2-MCF7GSE14664 63456575 63456613 38 0
H3K27me3 colorectalcancer 63455324 63456386 1062 0
H3ac HepG2E 63447994 63448943 949 0
H3ac HepG2E 63453558 63453745 187 0
H3ac HepG2E 63455538 63456871 1333 0
NRSF JurkatGSE13047 63410228 63411071 843 0
NRSF-mono JurkatQuESTdata 63410319 63411253 934 0
NRSF-poly JurkatQuESTdata 63410282 63411112 830 0
Oct1 HelaGSE14283 63453240 63453274 34 0
Oct1 HelaGSE14283 63456567 63456618 51 0
RARA MCF7GSE15244 63444603 63445154 551 0
RNAII Tamoxifen-MCF7GSE14664 63456567 63456626 59 0
TFAP2C MCF7GSE21234 63424054 63424492 438 0
TFAP2C MCF7GSE21234 63439189 63439684 495 0
TFAP2C MCF7GSE21234 63444471 63445080 609 0
hScc1 BcellGSE12603 63434695 63435428 733 0
hScc1 BcellGSE12603 63440902 63441439 537 0
hScc1 BcellGSE12603 63444747 63445052 305 0
hScc1 BcellGSE12603 63456348 63457695 1347 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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