Annotation Detail for H2AFY
Basic Information Top
| Gene Symbol: | H2AFY ( H2A.y,H2A/y,H2AF12M,H2AFJ,MACROH2A1.1,mH2A1,macroH2A1.2 ) |
|---|---|
| Gene Full Name: | H2A histone family, member Y |
| Band: | 5q31.1 |
| Quick Links | Entrez ID:9555; OMIM: 610054; Uniprot ID:H2AY_HUMAN; ENSEMBL ID: ENSG00000113648; HGNC ID: 4740 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 18 | N6-methyllysine. | |
| 123 | N6,N6-dimethyllysine (Probable). | |
| 129 | Phosphothreonine. | |
| 170 | Phosphoserine. | |
| 173 | Phosphoserine. | |
| 174 | Phosphothreonine. | |
| 178 | Phosphothreonine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 18 | N6-methyllysine. | Swiss-Prot 53.0 |
| 116 | Glycyl lysine isopeptide (Lys-Gly)(interchain with G-Cter in ubiquitin)(alternate). | Swiss-Prot 53.0 |
| 117 | Glycyl lysine isopeptide (Lys-Gly)(interchain with G-Cter in ubiquitin)(alternate). | Swiss-Prot 53.0 |
| 123 | N6,N6-dimethyllysine (Probable). | Swiss-Prot 53.0 |
| 128 | Phosphothreonine | Phospho.ELM 6.0 |
| 129 | Phosphothreonine. | Swiss-Prot 53.0 |
| 178 | Phosphothreonine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 48 | Phosphotyrosine(SRC) | HMM predict |
| 77 | Phosphothreonine(PKC) | HMM predict |
| 77 | Phosphothreonine(MAPK) | HMM predict |
| 77 | Phosphothreonine(PKA) | HMM predict |
| 120 | Phosphoserine(PKA) | HMM predict |
| 129 | Phosphothreonine | HMM predict |
| 138 | Phosphoserine(CDC2) | HMM predict |
| 140 | Phosphoserine | HMM predict |
| 140 | Phosphoserine(PKC) | HMM predict |
| 140 | Phosphoserine(ATM) | HMM predict |
| 158 | Phosphoserine(PKG) | HMM predict |
| 158 | Phosphoserine(PKC) | HMM predict |
| 173 | O-linked | HMM predict |
| 173 | Phosphoserine(CK1) | HMM predict |
| 174 | O-linked | HMM predict |
| 178 | O-linked | HMM predict |
| 217 | N-linked | HMM predict |
| 220 | N-linked | HMM predict |
| 341 | O-linked | HMM predict |
| 362 | Sulfotyrosine | HMM predict |
- RefSeq ID: NM_004893
- Location:chr5 134697969-134763475
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | Breast-Cancer | GSE22609 | 134773921 | 134774324 | 403 | 10647 |
| ER | Fulvestrant-MCF7 | GSE14664 | 134771227 | 134771263 | 36 | 7770 |
| FoxA1 | MCF7 | MACSdata | 134767359 | 134767654 | 295 | 4031 |
| Oct1 | Hela | GSE14283 | 134771222 | 134771259 | 37 | 7765 |
| TFAP2C | MCF7 | GSE21234 | 134767234 | 134767814 | 580 | 4049 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 134762491 | 134763254 | 763 | 0 |
| p130 | Senescent | GSE19898 | 134762941 | 134763417 | 476 | 0 |
| p130 | shRbQuiescent | GSE19898 | 134762962 | 134763582 | 620 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21488 | mRNA | H2AFY | chr5 | 134763040 | 134764880 | 139 | mRNA | H2AFY | chr5 | 134697969 | 134763476 | Sense/Antisense (SA) pairs |