AutismKB 2.0

Annotation Detail for CHD1L


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Basic Information Top
Gene Symbol:CHD1L ( ALC1,CHDL,FLJ22530 )
Gene Full Name: chromodomain helicase DNA binding protein 1-like
Band: 1q21.1
Quick LinksEntrez ID:9557; OMIM: 613039; Uniprot ID:CHD1L_HUMAN; ENSEMBL ID: ENSG00000131778; HGNC ID: 1916
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
177DEAH box.
636Phosphoserine.
891Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004284
  • Location:chr1 145180957-145234064
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 145177467 145177501 34 3474
H3ac HepG2E 145177947 145178332 385 2818
H3ac HepG2E 145179887 145180713 826 658
RNAII Tamoxifen-MCF7GSE14664 145177465 145177512 47 3469
TAF k562GSE8489 145177983 145178332 349 2800
TFAP2C MCF7GSE21234 145175336 145176223 887 5178
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 145231132 145231592 460 0
CTCF CD4GSE12889 145212111 145212273 162 0
CTCF CD4SISSRdata 145212111 145212273 162 0
CTCF G2GSE9613 145180483 145181603 1120 0
CTCF G2GSE9613 145223552 145223764 212 0
H3K4me2 HCT116GSE10453 145182111 145182646 535 0
H3ac HepG2E 145181416 145183815 2399 0
Myc hESGSE17917 145180799 145181223 424 0
Oct1 HelaGSE14283 145207186 145207217 31 0
Oct1 HelaGSE14283 145221755 145221792 37 0
P300 T30-glioblastomaGSE21026 145231005 145231526 521 0
PHF8 293TGSE20725 145180270 145182287 2017 0
PHF8 HeLaGSE20725 145180627 145181872 1245 0
Rb QuiescentGSE19898 145232150 145232276 126 0
TAF k562GSE8489 145181527 145183815 2288 0
hScc1 BcellGSE12603 145180483 145181741 1258 0
hScc1 CdLSGSE12603 145180523 145181563 1040 0
hScc1 CdLSGSE12603 145212055 145212331 276 0
p130 SenescentGSE19898 145230923 145231120 197 0
p130 SenescentGSE19898 145231279 145231679 400 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
1453 mRNA CHD1L chr1 143939149 143992257 82 mRNA chr1 143955355 144214515Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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