Annotation Detail for CD69

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Basic Information Top

Gene Symbol:	CD69 ( CLEC2C )
Gene Full Name:	CD69 molecule
Band:	12p13.31
Quick Links	Entrez ID:969; OMIM: 107273; Uniprot ID:CD69_HUMAN; ENSEMBL ID: ENSG00000110848; HGNC ID: 1694
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:1 results
Predicted PTM Sites by profile HMM from dbPTM:4 results

Location(AA)	Modification
166	N-linked (GlcNAc...) (Potential).

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_001781
Location:chr12 9796352-9804763
strand:-

Upstream the gene:3 results
Downstream the gene:10 results
Inside the gene:1 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Myc	K562	GSE19551	9808557	9809026	469	4028
NFkBII	GM12878	GSE19485	9807571	9810147	2576	4096
Nanog	hES	GSE18292	9820525	9820966	441	15982

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	9787067	9787268	201	9185
CTCF	CD4	SISSRdata	9787067	9787268	201	9185
CTCF	G2	GSE9613	9792364	9792899	535	3721
CTCF	G2	GSE9613	9794694	9795522	828	1245
hScc1	Bcell	GSE12603	9792661	9792899	238	3573
hScc1	Bcell	GSE12603	9794651	9795018	367	1518
hScc1	CdLS	GSE12603	9792364	9792899	535	3721
hScc1	CdLS	GSE12603	9794412	9795522	1110	1386
hScc1	G2	GSE9613	9792364	9792899	535	3721
hScc1	G2	GSE9613	9794651	9795522	871	1266

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Pol2	GM12878	GSE19551	9804361	9805054	693	0

Validated miRNA targets

miR Walk:17 results
Tarbase V5.0:0 results

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7a	hsa-let-7a-1	9	21149603
hsa-let-7a	hsa-let-7a-2	11	21149603
hsa-let-7a	hsa-let-7a-3	22	21149603
hsa-let-7f	hsa-let-7f-1	9	21149603
hsa-let-7f	hsa-let-7f-2	X	21149603
hsa-miR-155	hsa-mir-155	21	21149603
hsa-miR-155*	hsa-mir-155	21	21149603
hsa-miR-16	hsa-mir-16-1	13	21149603
hsa-miR-16	hsa-mir-16-2	3	21149603
hsa-miR-181a	hsa-mir-181a-2	9	17344418
hsa-miR-181a	hsa-mir-181a-1	1	17344418
hsa-miR-23a	hsa-mir-23a	19	21149603
hsa-miR-23a*	hsa-mir-23a	19	21149603
hsa-miR-23b	hsa-mir-23b	9	21149603
hsa-miR-23b*	hsa-mir-23b	9	21149603
hsa-miR-27a	hsa-mir-27a	19	21149603
hsa-miR-27a*	hsa-mir-27a	19	21149603

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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