Annotation Detail for EDEM1
Basic Information Top
| Gene Symbol: | EDEM1 ( EDEM,FLJ51559,FLJ51560,KIAA0212 ) |
|---|---|
| Gene Full Name: | ER degradation enhancer, mannosidase alpha-like 1 |
| Band: | 3p26.1 |
| Quick Links | Entrez ID:9695; OMIM: 607673; Uniprot ID:EDEM1_HUMAN; ENSEMBL ID: ENSG00000134109; HGNC ID: 18967 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 181 | N-linked (GlcNAc...) (Potential). | |
| 198 | N-linked (GlcNAc...) (Potential). | |
| 299 | N-linked (GlcNAc...) (Potential). | |
| 342 | N-linked (GlcNAc...) (Potential). | |
| 624 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 181 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 198 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 299 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 342 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 624 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 48 | Phosphoserine(CDC2) | HMM predict |
| 54 | Phosphoserine(MAPK) | HMM predict |
| 54 | O-linked | HMM predict |
| 54 | Phosphoserine(CDC2) | HMM predict |
| 56 | O-linked | HMM predict |
| 62 | Methylarginine | HMM predict |
| 82 | Phosphoserine | HMM predict |
| 114 | Phosphotyrosine(INSR) | HMM predict |
| 114 | Phosphotyrosine(Syk) | HMM predict |
| 198 | N-linked | HMM predict |
| 299 | N-linked | HMM predict |
| 342 | N-linked | HMM predict |
| 420 | Phosphotyrosine(INSR) | HMM predict |
| 654 | Valine | HMM predict |
- RefSeq ID: NM_014674
- Location:chr3 5204432-5236641
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 5203467 | 5204019 | 552 | 690 |
| TAF | k562 | GSE8489 | 5203467 | 5203943 | 476 | 728 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 5243489 | 5243692 | 203 | 6949 |
| CTCF | CD4 | SISSRdata | 5243489 | 5243692 | 203 | 6949 |
| CTCF | G2 | GSE9613 | 5243132 | 5243360 | 228 | 6605 |
| CTCF | G2 | GSE9613 | 5248311 | 5248497 | 186 | 11763 |
| CTCF | G2 | GSE9613 | 5254538 | 5254862 | 324 | 18059 |
| ER | E2-MCF7 | GSE14664 | 5248180 | 5248220 | 40 | 11559 |
| FOXA1 | MCF7 | GSE15244 | 5249416 | 5249680 | 264 | 12907 |
| FOXA1 | MCF7 | GSE15244 | 5252556 | 5252882 | 326 | 16078 |
| RARA | MCF7 | GSE15244 | 5249308 | 5249680 | 372 | 12853 |
| hScc1 | CdLS | GSE12603 | 5243132 | 5243608 | 476 | 6729 |
| hScc1 | G2 | GSE9613 | 5243132 | 5243608 | 476 | 6729 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | Jurkat | GSE17954 | 5212045 | 5215274 | 3229 | 0 |
| CTCF | G2 | GSE9613 | 5204934 | 5205318 | 384 | 0 |
| CTCF | G2 | GSE9613 | 5230426 | 5230834 | 408 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 5208060 | 5208143 | 83 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 5208294 | 5208350 | 56 | 0 |
| FOXA1 | MCF7 | GSE15244 | 5205283 | 5206205 | 922 | 0 |
| FOXA1 | MCF7 | GSE15244 | 5211185 | 5211714 | 529 | 0 |
| FOXA1 | MCF7 | GSE15244 | 5227428 | 5230221 | 2793 | 0 |
| Fos | K562 | GSE19551 | 5211218 | 5211977 | 759 | 0 |
| H3K4me3 | colorectal | cancer | 5205664 | 5206164 | 500 | 0 |
| H3ac | HepG2 | E | 5206645 | 5207381 | 736 | 0 |
| NRSF | mAb | Jurkat | 5205917 | 5206205 | 288 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 5204168 | 5205576 | 1408 | 0 |
| RARA | MCF7 | GSE15244 | 5205392 | 5206205 | 813 | 0 |
| RARA | MCF7 | GSE15244 | 5211185 | 5211749 | 564 | 0 |
| RARA | MCF7 | GSE15244 | 5213302 | 5213539 | 237 | 0 |
| hScc1 | Bcell | GSE12603 | 5204721 | 5205626 | 905 | 0 |
Validated miRNA targets