AutismKB 2.0

Annotation Detail for CROCC


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Basic Information Top
Gene Symbol:CROCC ( KIAA0445,ROLT )
Gene Full Name: ciliary rootlet coiled-coil, rootletin
Band: 1p36.13
Quick LinksEntrez ID:9696; OMIM: NA; Uniprot ID:CROCC_HUMAN; ENSEMBL ID: ENSG00000058453; HGNC ID: 21299
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
1619Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
21Phosphothreonine(PKC)HMM predict
58N-linkedHMM predict
60Phosphoserine(PKG)HMM predict
60Phosphoserine(CAMK2)HMM predict
60Phosphoserine(ATM)HMM predict
64Phosphoserine(IKK)HMM predict
231Phosphoserine(PKB)HMM predict
288Phosphotyrosine(INSR)HMM predict
331Phosphothreonine(PKC)HMM predict
452Phosphothreonine(PKC)HMM predict
462Phosphoserine(CK2)HMM predict
464Phosphoserine(CK1)HMM predict
466Phosphoserine(CK1)HMM predict
481N-linkedHMM predict
492Phosphothreonine(CDC2)HMM predict
492Phosphothreonine(MAPK)HMM predict
494Phosphoserine(CDC2)HMM predict
494Phosphoserine(PKA)HMM predict
494Phosphoserine(CDK)HMM predict
500Phosphoserine(CDC2)HMM predict
500Phosphoserine(PKB)HMM predict
500Phosphoserine(CDK)HMM predict
506Phosphoserine(CDC2)HMM predict
512O-linkedHMM predict
512Phosphoserine(CDC2)HMM predict
516O-linkedHMM predict
516Phosphoserine(ATM)HMM predict
557Phosphoserine(CK2)HMM predict
559Phosphoserine(CK2)HMM predict
561Phosphoserine(CK1)HMM predict
676Phosphoserine(PKG)HMM predict
711Phosphothreonine(CK2)HMM predict
739Phosphoserine(CK1)HMM predict
745N-linkedHMM predict
824Phosphothreonine(PKC)HMM predict
844Phosphoserine(CAMK2)HMM predict
844PhosphoserineHMM predict
844Phosphoserine(PKG)HMM predict
1039Phosphoserine(CK1)HMM predict
1065Phosphoserine(CK1)HMM predict
1204Phosphoserine(PKG)HMM predict
1324Phosphothreonine(PKA)HMM predict
1406Phosphoserine(PKG)HMM predict
1451Phosphoserine(CDC2)HMM predict
1451O-linkedHMM predict
1451Phosphoserine(CDK)HMM predict
1460Phosphoserine(CDC2)HMM predict
1460O-linkedHMM predict
1460PhosphoserineHMM predict
1476Phosphoserine(CDC2)HMM predict
1486O-linkedHMM predict
1486Phosphoserine(ATM)HMM predict
1490Phosphoserine(ATM)HMM predict
1490Phosphoserine(CDC2)HMM predict
1490Phosphoserine(CDK)HMM predict
1490O-linkedHMM predict
1495O-linkedHMM predict
1496Phosphoserine(CDC2)HMM predict
1496Phosphoserine(CDK)HMM predict
1496Phosphoserine(MAPK)HMM predict
1496O-linkedHMM predict
1499Phosphoserine(MAPK)HMM predict
1563Phosphoserine(CK2)HMM predict
1598Phosphothreonine(PKA)HMM predict
1598Phosphothreonine(PKC)HMM predict
1604Phosphothreonine(PKC)HMM predict
1612Phosphothreonine(CK2)HMM predict
1619Phosphoserine(ATM)HMM predict
1629N-linkedHMM predict
1688Phosphoserine(CK1)HMM predict
1741Phosphoserine(IKK)HMM predict
1743N-linkedHMM predict
1749N-linkedHMM predict
1784Phosphoserine(PKG)HMM predict
1786Phosphoserine(IKK)HMM predict
1786Phosphoserine(CK1)HMM predict
1832Phosphothreonine(PKC)HMM predict
1900Phosphoserine(PKG)HMM predict
1939Phosphoserine(IKK)HMM predict
1968Phosphothreonine(PKC)HMM predict
2004Phosphoserine(PKG)HMM predict
2005Phosphoserine(PKB)HMM predict
2009Phosphoserine(MAPK)HMM predict
2009Phosphoserine(ATM)HMM predict
2012Phosphoserine(ATM)HMM predict
2015ProlineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014675
  • Location:chr1 17121031-17172046
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 17111099 17111949 850 9508
CTCF G2GSE9613 17113046 17113400 354 7809
CTCF G2GSE9613 17114739 17114953 214 6186
GABP k562GSE8489 17103587 17104360 773 17058
H3ac HepG2E 17101491 17102216 725 19178
H3ac HepG2E 17103587 17104360 773 17058
H3ac HepG2E 17104941 17105273 332 15925
H3ac HepG2E 17111285 17112208 923 9285
H3ac HepG2E 17112551 17112772 221 8370
H3ac HepG2E 17113873 17114132 259 7029
H3ac HepG2E 17116433 17116692 259 4469
Myc K562GSE19551 17103409 17105024 1615 16815
PHF8 HeLaGSE20725 17112492 17114163 1671 7704
PHF8 Hs68plusFBSGSE20725 17112462 17114060 1598 7771
Pol2 GM12878GSE19551 17103321 17104923 1602 16910
RARA MCF7GSE15244 17103587 17104360 773 17058
Rb QuiescentGSE19898 17112591 17113178 587 8147
Rb SenescentGSE19898 17112844 17113141 297 8039
TAF HelaGSE8489 17103587 17103896 309 17290
TAF k562GSE8489 17103587 17103854 267 17311
TAFII hESGSE17917 17103744 17104215 471 17052
hScc1 BcellGSE12603 17112982 17113546 564 7768
p130 QuiescentGSE19898 17112603 17113022 419 8219
p130 shRbQuiescentGSE19898 17112654 17113018 364 8196
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 17150703 17151035 332 0
CTCF CD4GSE12889 17159810 17160152 342 0
CTCF CD4SISSRdata 17150703 17151035 332 0
CTCF CD4SISSRdata 17159810 17160152 342 0
CTCF HelaGSE12889 17162550 17162798 248 0
CTCF JurkatGSE12889 17150832 17150986 154 0
CTCF G2GSE9613 17123283 17124199 916 0
CTCF G2GSE9613 17126151 17126750 599 0
CTCF G2GSE9613 17127360 17127557 197 0
CTCF G2GSE9613 17129274 17129731 457 0
CTCF G2GSE9613 17131539 17131892 353 0
CTCF G2GSE9613 17135661 17135992 331 0
CTCF G2GSE9613 17143092 17143312 220 0
CTCF G2GSE9613 17144407 17144571 164 0
CTCF G2GSE9613 17145961 17146106 145 0
CTCF G2GSE9613 17146601 17146868 267 0
CTCF G2GSE9613 17147343 17147802 459 0
CTCF G2GSE9613 17152444 17153404 960 0
CTCF G2GSE9613 17154266 17154606 340 0
CTCF G2GSE9613 17159608 17160333 725 0
CTCF G2GSE9613 17162536 17162776 240 0
CTCF G2GSE9613 17165440 17165835 395 0
CTCF G2GSE9613 17166376 17166747 371 0
CTCF G2GSE9613 17167962 17168378 416 0
CTCF G2GSE9613 17170372 17170786 414 0
Fos K562GSE19551 17150746 17151059 313 0
H3ac HepG2E 17128215 17128917 702 0
Myc K562GSE19551 17129709 17129944 235 0
Myc K562GSE19551 17150645 17151041 396 0
Myc K562GSE19551 17159646 17160115 469 0
Oct1 H2O2-HelaGSE14283 17122805 17122832 27 0
Oct1 H2O2-HelaGSE14283 17126792 17126835 43 0
Oct1 HelaGSE14283 17126793 17126834 41 0
P300 T30-glioblastomaGSE21026 17166116 17166957 841 0
PHF8 HeLaGSE20725 17159723 17160362 639 0
PHF8 Hs68minusFBSGSE20725 17159693 17160446 753 0
TFAP2C MCF7GSE21234 17147227 17148379 1152 0
TFAP2C MCF7GSE21234 17150500 17151167 667 0
hScc1 BcellGSE12603 17126261 17126750 489 0
hScc1 BcellGSE12603 17128726 17129552 826 0
hScc1 BcellGSE12603 17138020 17138358 338 0
hScc1 BcellGSE12603 17143018 17143437 419 0
hScc1 BcellGSE12603 17144407 17144810 403 0
hScc1 BcellGSE12603 17151735 17152100 365 0
hScc1 BcellGSE12603 17152836 17153370 534 0
hScc1 BcellGSE12603 17159643 17160417 774 0
hScc1 BcellGSE12603 17165585 17165835 250 0
hScc1 BcellGSE12603 17167245 17167483 238 0
hScc1 BcellGSE12603 17170336 17170643 307 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
285 mRNA CROCC chr1 16967537 17015338 362 mRNA chr1 16977724 16978086 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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