Annotation Detail for CD72

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	CD72 ( CD72b,LYB2 )
Gene Full Name:	CD72 molecule
Band:	9p13.3
Quick Links	Entrez ID:971; OMIM: 107272; Uniprot ID:CD72_HUMAN; ENSEMBL ID: ENSG00000137101; HGNC ID: 1696
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:1 results
Predicted PTM Sites by profile HMM from dbPTM:11 results

Location(AA)	Modification
136	N-linked (GlcNAc...) (Potential).

Location(AA)	Modification	Resource
39	Phosphotyrosine(Syk)	HMM predict
53	Phosphoserine(IKK)	HMM predict
79	Phosphoserine(MAPK)	HMM predict
88	S-palmitoyl	HMM predict
136	N-linked	HMM predict
137	Phosphoserine(CK1)	HMM predict
167	Phosphoserine(ATM)	HMM predict
198	Phosphothreonine(PKA)	HMM predict
348	Phosphotyrosine(Jak)	HMM predict
357	Phenylalanine	HMM predict
358	Phenylalanine	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_001782
Location:chr9 35599975-35608407
strand:-

Upstream the gene:1 results
Downstream the gene:0 results
Inside the gene:5 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CBP	Jurkat	GSE17954	35608155	35610593	2438	967

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	35601226	35601551	325	0
CTCF	CD4	GSE12889	35606905	35607173	268	0
CTCF	CD4	SISSRdata	35601226	35601551	325	0
CTCF	CD4	SISSRdata	35606905	35607173	268	0
hScc1	Bcell	GSE12603	35606910	35607411	501	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
26376	mRNA	TESK1	chr9	35595366	35600029	54	mRNA	CD72	chr9	35599975	35608408	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved