AutismKB 2.0

Annotation Detail for RAB11FIP3


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Basic Information Top
Gene Symbol:RAB11FIP3 ( KIAA0665,Rab11-FIP3 )
Gene Full Name: RAB11 family interacting protein 3 (class II)
Band: 16p13.3
Quick LinksEntrez ID:9727; OMIM: 608738; Uniprot ID:RFIP3_HUMAN; ENSEMBL ID: ENSG00000090565; HGNC ID: 17224
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
8O-linkedHMM predict
8Phosphoserine(CDC2)HMM predict
8Phosphoserine(MAPK)HMM predict
12O-linkedHMM predict
52Phosphoserine(IKK)HMM predict
88O-linkedHMM predict
93MethylarginineHMM predict
97MethylarginineHMM predict
102Phosphoserine(CDC2)HMM predict
102Phosphoserine(MAPK)HMM predict
112O-linkedHMM predict
180Phosphoserine(CDK)HMM predict
180Phosphoserine(ATM)HMM predict
180Phosphoserine(IKK)HMM predict
180PhosphoserineHMM predict
180Phosphoserine(CDC2)HMM predict
185O-linkedHMM predict
188Phosphoserine(IKK)HMM predict
188Phosphoserine(CK1)HMM predict
188Phosphoserine(ATM)HMM predict
195O-linkedHMM predict
200Phosphoserine(ATM)HMM predict
245Phosphotyrosine(Syk)HMM predict
260Phosphotyrosine(EGFR)HMM predict
310Phosphotyrosine(INSR)HMM predict
317Phosphotyrosine(INSR)HMM predict
317Phosphotyrosine(SRC)HMM predict
318Phosphoserine(IKK)HMM predict
393SulfotyrosineHMM predict
393Phosphotyrosine(INSR)HMM predict
414Phosphoserine(ATM)HMM predict
420Phosphothreonine(MAPK)HMM predict
422Phosphoserine(CDK)HMM predict
422Phosphoserine(CDC2)HMM predict
428Phosphoserine(PKC)HMM predict
428PhosphoserineHMM predict
538PhosphoserineHMM predict
538Phosphoserine(CK1)HMM predict
556Phosphoserine(CK1)HMM predict
564S-palmitoylHMM predict
648Phosphoserine(PKB)HMM predict
648Phosphoserine(IKK)HMM predict
648Phosphoserine(PKA)HMM predict
661Phosphoserine(PKG)HMM predict
661Phosphoserine(CK2)HMM predict
714Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014700
  • Location:chr16 415668-512480
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 413700 415708 2008 965
CTCF G2GSE9613 415233 415735 502 185
PHF8 HeLaGSE20725 414566 416072 1506 350
hScc1 BcellGSE12603 415088 415735 647 257
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 513273 513628 355 970
CTCF G2GSE9613 514744 515460 716 2622
hScc1 BcellGSE12603 513457 513694 237 1095
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 477809 478026 217 0
CTCF CD4SISSRdata 477809 478026 217 0
CTCF G2GSE9613 416158 416552 394 0
CTCF G2GSE9613 456595 457399 804 0
CTCF G2GSE9613 477436 478053 617 0
CTCF G2GSE9613 490190 490374 184 0
CTCF G2GSE9613 495528 495985 457 0
CTCF G2GSE9613 499763 500397 634 0
CTCF G2GSE9613 500798 501856 1058 0
CTCF G2GSE9613 509139 509444 305 0
ER MCF7GSE19013 440387 442256 1869 0
H3ac HepG2E 457363 458263 900 0
H3ac HepG2E 491743 493281 1538 0
H3ac HepG2E 497653 497902 249 0
Myc K562GSE19551 446794 447252 458 0
Myc hESGSE17917 448111 448393 282 0
NRSF pAbJurkat 452638 453390 752 0
Oct4 ESGSE20650 484624 484972 348 0
TAF HelaGSE8489 497620 497902 282 0
TFAP2C MCF7GSE21234 440513 441124 611 0
TFAP2C MCF7GSE21234 454203 454641 438 0
TFAP2C MCF7GSE21234 461088 461892 804 0
USF1 HepG2E 491743 493030 1287 0
USF2 HepG2E 491743 492941 1198 0
hScc1 BcellGSE12603 416110 416587 477 0
hScc1 BcellGSE12603 472434 472898 464 0
hScc1 BcellGSE12603 500798 501856 1058 0
hScc1 BcellGSE12603 509269 509632 363 0
p130 QuiescentGSE19898 463730 463921 191 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9426 mRNA RAB11FIP3 chr16 415668 512481 302 EST chr16 512179 512554Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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