AutismKB 2.0

Annotation Detail for VPRBP


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Basic Information Top
Gene Symbol:VPRBP ( DCAF1,KIAA0800,MGC102804 )
Gene Full Name: Vpr (HIV-1) binding protein
Band: 3p21.2
Quick LinksEntrez ID:9730; OMIM: NA; Uniprot ID:VPRBP_HUMAN; ENSEMBL ID: ENSG00000145041; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
888Phosphothreonine.
895Phosphoserine.
898Phosphoserine.
902Phosphothreonine.
1000Phosphoserine.
1249DWD box 1 (By similarity).
1285DWD box 2 (By similarity).
Location(AA) Modifications Resource
Location(AA) Modification Resource
95Phosphothreonine(PKC)HMM predict
197PhosphoserineHMM predict
197Phosphoserine(CDC2)HMM predict
202Phosphoserine(PKG)HMM predict
202Phosphoserine(PKA)HMM predict
203Phosphoserine(PKG)HMM predict
254N-linkedHMM predict
256O-linkedHMM predict
290Phosphoserine(ATM)HMM predict
301N-linkedHMM predict
315N-linkedHMM predict
443N-linkedHMM predict
506Phosphoserine(CK2)HMM predict
516Phosphothreonine(PKC)HMM predict
617N-linkedHMM predict
619Phosphothreonine(PKC)HMM predict
655O-linkedHMM predict
656O-linkedHMM predict
706Phosphothreonine(CDC2)HMM predict
769Phosphoserine(CK1)HMM predict
770Phosphothreonine(PKC)HMM predict
885O-linkedHMM predict
891O-linkedHMM predict
895O-linkedHMM predict
895Phosphoserine(MAPK)HMM predict
898Phosphoserine(IKK)HMM predict
922O-linkedHMM predict
925O-linkedHMM predict
925O-linkedHMM predict
928O-linkedHMM predict
928O-linkedHMM predict
985Phosphoserine(ATM)HMM predict
987Phosphoserine(ATM)HMM predict
1000Phosphoserine(MAPK)HMM predict
1030O-linkedHMM predict
1049N-linkedHMM predict
1055N-linkedHMM predict
1059Phosphoserine(PKC)HMM predict
1059Phosphoserine(PKG)HMM predict
1131Phosphotyrosine(EGFR)HMM predict
1148Phosphoserine(IKK)HMM predict
1157Phosphoserine(IKK)HMM predict
1181SulfotyrosineHMM predict
1181Phosphotyrosine(Jak)HMM predict
1181Phosphotyrosine(EGFR)HMM predict
1231N-linkedHMM predict
1302N-linkedHMM predict
1328Phosphoserine(CDC2)HMM predict
1338N-linkedHMM predict
1476Phosphoserine(CK2)HMM predict
1476Phosphoserine(CK1)HMM predict
1491Phosphoserine(IKK)HMM predict
1492Phosphoserine(CK2)HMM predict
1495Phosphoserine(CK2)HMM predict
1495Phosphoserine(CK1)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014703
  • Location:chr3 51408337-51509040
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 51511101 51511439 338 2230
CTCF CD4SISSRdata 51511101 51511439 338 2230
CTCF JurkatGSE12889 51511146 51511486 340 2276
CTCF G2GSE9613 51511068 51511292 224 2140
CTCF G2GSE9613 51512158 51512621 463 3349
CTCF G2GSE9613 51517978 51518326 348 9112
H3ac HepG2E 51509262 51509552 290 367
H3ac HepG2E 51510423 51511236 813 1789
Nanog hESGSE18292 51509270 51509568 298 379
Oct1 H2O2-HelaGSE14283 51512715 51512742 27 3688
Rb SenescentGSE19898 51508894 51509434 540 124
Sox2 hESGSE18292 51509263 51509574 311 378
TFAP2C MCF7GSE21234 51519908 51520377 469 11102
hScc1 BcellGSE12603 51510786 51511292 506 1999
hScc1 BcellGSE12603 51511980 51512585 605 3242
hScc1 CdLSGSE12603 51510786 51511292 506 1999
hScc1 G2GSE9613 51511068 51511292 224 2140
p130 QuiescentGSE19898 51508975 51509490 515 192
p130 SenescentGSE19898 51508851 51509572 721 171
p130 shRbQuiescentGSE19898 51508916 51509797 881 316
p130 shRbSenescentGSE19898 51508875 51509291 416 43
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 51411747 51412115 368 0
CTCF G2GSE9613 51412647 51412914 267 0
CTCF G2GSE9613 51508303 51508963 660 0
ER E2-MCF7GSE14664 51447345 51447389 44 0
ER E2-MCF7GSE14664 51459143 51459175 32 0
ER Fulvestrant-MCF7GSE14664 51460533 51460574 41 0
ER Fulvestrant-MCF7GSE14664 51490042 51490077 35 0
ETS1 JurkatGSE17954 51508039 51509880 1841 0
Oct1 H2O2-HelaGSE14283 51426968 51426998 30 0
Oct1 H2O2-HelaGSE14283 51482832 51482861 29 0
Oct1 HelaGSE14283 51426965 51426998 33 0
Oct1 HelaGSE14283 51459136 51459175 39 0
Oct1 HelaGSE14283 51460533 51460574 41 0
Oct1 HelaGSE14283 51463871 51463909 38 0
P300 T30-glioblastomaGSE21026 51507851 51509711 1860 0
PHF8 293TGSE20725 51507981 51509868 1887 0
Rb GrowingGSE19898 51508218 51508371 153 0
Rb QuiescentGSE19898 51508208 51508351 143 0
Rb SenescentGSE19898 51508036 51508703 667 0
STAT1 IFNSISSRdata 51494206 51494710 504 0
TFAP2C MCF7GSE21234 51420345 51420700 355 0
hScc1 BcellGSE12603 51508683 51509067 384 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
18128 mRNA RBM15B chr3 51403770 51410374 1258 mRNA VprBP chr3 51408337 51509041Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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