AutismKB 2.0

Annotation Detail for IFT140


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Basic Information Top
Gene Symbol:IFT140 ( DKFZp564L232,FLJ10306,FLJ30571,KIAA0590,WDTC2,c305C8.4,c380F5.1,gs114 )
Gene Full Name: intraflagellar transport 140 homolog (Chlamydomonas)
Band: 16p13.3
Quick LinksEntrez ID:9742; OMIM: NA; Uniprot ID:IF140_HUMAN; ENSEMBL ID: ENSG00000187535; HGNC ID: 29077
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
360Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
17Phosphoserine(CDC2)HMM predict
36O-linkedHMM predict
37O-linkedHMM predict
38O-linkedHMM predict
39O-linkedHMM predict
40O-linkedHMM predict
112Phosphoserine(CDC2)HMM predict
189Phosphoserine(CDC2)HMM predict
193Phosphoserine(IKK)HMM predict
274Phosphoserine(PKG)HMM predict
314Phosphoserine(MAPK)HMM predict
360Phosphoserine(CDC2)HMM predict
373Phosphothreonine(CDK)HMM predict
373Phosphothreonine(MAPK)HMM predict
380N-linkedHMM predict
410Phosphoserine(PKB)HMM predict
495Phosphotyrosine(Abl)HMM predict
495Phosphotyrosine(INSR)HMM predict
495Phosphotyrosine(SRC)HMM predict
495Phosphotyrosine(Syk)HMM predict
578O-linkedHMM predict
579Phosphoserine(CK1)HMM predict
624Phosphothreonine(PKA)HMM predict
624Phosphothreonine(PKC)HMM predict
646Phosphotyrosine(INSR)HMM predict
669Phosphothreonine(MAPK)HMM predict
672Phosphoserine(IKK)HMM predict
672Phosphoserine(ATM)HMM predict
676Phosphoserine(IKK)HMM predict
685MethylarginineHMM predict
719Phosphoserine(IKK)HMM predict
922Phosphoserine(PKG)HMM predict
944Phosphoserine(CK1)HMM predict
967Phosphoserine(ATM)HMM predict
1005N-linkedHMM predict
1009N-linkedHMM predict
1022Phosphoserine(ATM)HMM predict
1062Phosphoserine(CK2)HMM predict
1063Phosphoserine(ATM)HMM predict
1121Phosphoserine(CK1)HMM predict
1297Phosphotyrosine(Syk)HMM predict
1297SulfotyrosineHMM predict
1300Phosphotyrosine(Syk)HMM predict
1392Phosphotyrosine(EGFR)HMM predict
1392Phosphotyrosine(Syk)HMM predict
1416Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014714
  • Location:chr16 1500431-1597300
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
PHF8 Hs68plusFBSGSE20725 1600013 1601073 1060 3243
TFAP2C MCF7GSE21234 1599940 1600480 540 2910
hScc1 BcellGSE12603 1600262 1600913 651 3287
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 1516139 1516312 173 0
CTCF CD4SISSRdata 1516139 1516312 173 0
CTCF G2GSE9613 1501592 1502012 420 0
CTCF G2GSE9613 1508720 1508970 250 0
CTCF G2GSE9613 1509325 1510222 897 0
CTCF G2GSE9613 1515813 1516511 698 0
CTCF G2GSE9613 1516977 1517502 525 0
CTCF G2GSE9613 1518577 1518696 119 0
CTCF G2GSE9613 1546148 1546389 241 0
CTCF G2GSE9613 1552799 1553013 214 0
CTCF G2GSE9613 1554383 1554703 320 0
CTCF G2GSE9613 1582427 1583106 679 0
FoxA1 MCF7MACSdata 1571058 1571239 181 0
KLF4 hESGSE17917 1502013 1502391 378 0
KLF4 hESGSE17917 1571628 1571802 174 0
NRSF pAbJurkat 1576319 1576572 253 0
TFAP2C MCF7GSE21234 1562621 1563191 570 0
TFAP2C MCF7GSE21234 1563272 1563872 600 0
hScc1 BcellGSE12603 1516337 1517302 965 0
hScc1 BcellGSE12603 1518577 1518852 275 0
hScc1 BcellGSE12603 1554272 1554431 159 0
hScc1 BcellGSE12603 1580436 1580724 288 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
9452 mRNA KIAA0683 chr16 1483422 1500454 23 mRNA WDTC2 chr16 1500431 1597301Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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