AutismKB 2.0

Annotation Detail for ATG13


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:ATG13 ( FLJ20698,KIAA0652 )
Gene Full Name: ATG13 autophagy related 13 homolog (S. cerevisiae)
Band: 11p11.2
Quick LinksEntrez ID:9776; OMIM: NA; Uniprot ID:ATG13_HUMAN; ENSEMBL ID: ENSG00000175224; HGNC ID: 29091
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
1N-acetylmethionine.
361Phosphoserine (By similarity).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014741
  • Location:chr11 46595702-46652642
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 46594712 46596377 1665 158
H3ac HepG2E 46593682 46597469 3787 127
PHF8 293TGSE20725 46594968 46596282 1314 78
PHF8 Hs68minusFBSGSE20725 46594874 46596447 1573 42
p130 SenescentGSE19898 46595038 46596197 1159 85
p130 shRbQuiescentGSE19898 46595072 46596085 1013 124
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
STAT1 IFNSISSRdata 46652940 46653990 1050 823
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 46595888 46596153 265 0
CTCF CD4SISSRdata 46595888 46596153 265 0
FOXA1 MCF7GSE15244 46595491 46596541 1050 0
Fos K562GSE19551 46620978 46621479 501 0
H3K4me3 colorectalcancer 46595632 46595924 292 0
H3K4me3 colorectalcancer 46596190 46596504 314 0
Oct1 H2O2-HelaGSE14283 46638467 46638512 45 0
Oct1 HelaGSE14283 46638467 46638511 44 0
RARA MCF7GSE15244 46595565 46595959 394 0
RARG MCF7GSE15244 46595632 46596541 909 0
RARG MCF7GSE15244 46646639 46647361 722 0
Rb QuiescentGSE19898 46595597 46595926 329 0
TAF HelaGSE8489 46596247 46596577 330 0
TAF HelaGSE8489 46608518 46608669 151 0
TAF HelaGSE8489 46640456 46640738 282 0
hScc1 BcellGSE12603 46595780 46596399 619 0
hScc1 CdLSGSE12603 46595676 46596361 685 0
p130 shRbSenescentGSE19898 46595402 46596155 753 0
p63 keratinocytesGSE17611 46609791 46610494 703 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
4383 mRNA KIAA0652 chr11 46595702 46652643 314 EST chr11 46594235 46596035Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved