Annotation Detail for RIMS3
Basic Information Top
| Gene Symbol: | RIMS3 ( KIAA0237,NIM3,RIM3 ) |
|---|---|
| Gene Full Name: | regulating synaptic membrane exocytosis 3 |
| Band: | 1p34.2 |
| Quick Links | Entrez ID:9783; OMIM: 611600; Uniprot ID:RIMS3_HUMAN; ENSEMBL ID: ENSG00000117016; HGNC ID: 21292 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 245 | Phosphotyrosine. | |
| 295 | Phosphoserine. | |
| 297 | Phosphoserine (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 245 | Phosphotyrosine. | Swiss-Prot 53.0 |
| 297 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 22 | Phosphoserine(CK1) | HMM predict |
| 40 | Phosphothreonine(PKC) | HMM predict |
| 47 | Phosphoserine(PKA) | HMM predict |
| 48 | Phosphoserine(PKG) | HMM predict |
| 100 | Phosphothreonine(PKA) | HMM predict |
| 111 | Phosphoserine(IKK) | HMM predict |
| 114 | Phosphoserine(IKK) | HMM predict |
| 115 | N-linked | HMM predict |
| 132 | Phosphoserine(ATM) | HMM predict |
| 187 | Phosphoserine(IKK) | HMM predict |
| 189 | Phosphoserine(IKK) | HMM predict |
| 211 | Phosphothreonine(PKC) | HMM predict |
| 285 | Phosphoserine(IKK) | HMM predict |
| 295 | Phosphoserine(CAMK2) | HMM predict |
| 295 | Phosphoserine(PKA) | HMM predict |
| 295 | Phosphoserine(PKG) | HMM predict |
| 297 | Phosphoserine(IKK) | HMM predict |
| 298 | Phosphoserine(CK1) | HMM predict |
| 301 | Phosphoserine(IKK) | HMM predict |
| 304 | Phosphoserine(CDC2) | HMM predict |
| 304 | Phosphoserine(CDK) | HMM predict |
| 307 | S-farnesyl | HMM predict |
- RefSeq ID: NM_014747
- Location:chr1 40858938-40903910
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 40907209 | 40907505 | 296 | 3447 |
| CTCF | CD4 | SISSRdata | 40907209 | 40907505 | 296 | 3447 |
| CTCF | Hela | GSE12889 | 40907229 | 40907571 | 342 | 3490 |
| CTCF | G2 | GSE9613 | 40907177 | 40907610 | 433 | 3483 |
| hScc1 | Bcell | GSE12603 | 40907108 | 40907610 | 502 | 3449 |
| hScc1 | CdLS | GSE12603 | 40906794 | 40907610 | 816 | 3292 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 40850561 | 40850831 | 270 | 8243 |
| CTCF | CD4 | SISSRdata | 40850561 | 40850831 | 270 | 8243 |
| CTCF | G2 | GSE9613 | 40850784 | 40851183 | 399 | 7955 |
| Myc | K562 | GSE19551 | 40850560 | 40850940 | 380 | 8189 |
| Oct1 | Hela | GSE14283 | 40839459 | 40839498 | 39 | 19460 |
| hScc1 | Bcell | GSE12603 | 40840365 | 40840611 | 246 | 18451 |
| hScc1 | Bcell | GSE12603 | 40850784 | 40851074 | 290 | 8010 |
| hScc1 | CdLS | GSE12603 | 40850784 | 40851109 | 325 | 7992 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | Jurkat | GSE17954 | 40900987 | 40902863 | 1876 | 0 |
| CTCF | CD4 | GSE12889 | 40868872 | 40869073 | 201 | 0 |
| CTCF | CD4 | SISSRdata | 40868872 | 40869073 | 201 | 0 |
| CTCF | Hela | GSE12889 | 40863400 | 40863619 | 219 | 0 |
| CTCF | Jurkat | GSE12889 | 40863433 | 40863609 | 176 | 0 |
| CTCF | G2 | GSE9613 | 40863153 | 40863825 | 672 | 0 |
| CTCF | G2 | GSE9613 | 40864222 | 40864496 | 274 | 0 |
| CTCF | G2 | GSE9613 | 40874038 | 40874222 | 184 | 0 |
| CTCF | G2 | GSE9613 | 40887849 | 40888783 | 934 | 0 |
| CTCF | G2 | GSE9613 | 40892183 | 40892841 | 658 | 0 |
| CTCF | G2 | GSE9613 | 40900100 | 40900395 | 295 | 0 |
| ER | E2-MCF7 | GSE14664 | 40899869 | 40899901 | 32 | 0 |
| NFkBII | GM12878 | GSE19485 | 40866177 | 40867492 | 1315 | 0 |
| NRSF | Jurkat | GSE13047 | 40876526 | 40877482 | 956 | 0 |
| NRSF | Jurkat | GSE13047 | 40891913 | 40892768 | 855 | 0 |
| NRSF | Jurkat | SISSRdata | 40892085 | 40892774 | 689 | 0 |
| NRSF | mAb | Jurkat | 40875629 | 40877723 | 2094 | 0 |
| NRSF | mAb | Jurkat | 40878094 | 40878940 | 846 | 0 |
| NRSF | mAb | Jurkat | 40889858 | 40892841 | 2983 | 0 |
| NRSF | mAb | Jurkat | 40893228 | 40893814 | 586 | 0 |
| NRSF | mAb | Jurkat | 40898377 | 40898601 | 224 | 0 |
| NRSF-mono | Jurkat | QuESTdata | 40876573 | 40877233 | 660 | 0 |
| NRSF-mono | Jurkat | QuESTdata | 40891929 | 40892851 | 922 | 0 |
| NRSF-poly | Jurkat | QuESTdata | 40876671 | 40877424 | 753 | 0 |
| NRSF-poly | Jurkat | QuESTdata | 40891913 | 40892619 | 706 | 0 |
| Oct1 | Hela | GSE14283 | 40883602 | 40883648 | 46 | 0 |
| Oct1 | Hela | GSE14283 | 40885522 | 40885557 | 35 | 0 |
| Oct1 | Hela | GSE14283 | 40894731 | 40894790 | 59 | 0 |
| Rb | Quiescent | GSE19898 | 40892254 | 40892388 | 134 | 0 |
| TFAP2C | MCF7 | GSE21234 | 40863211 | 40863873 | 662 | 0 |
| TFAP2C | MCF7 | GSE21234 | 40899982 | 40900707 | 725 | 0 |
| hScc1 | Bcell | GSE12603 | 40863270 | 40863967 | 697 | 0 |
| hScc1 | Bcell | GSE12603 | 40892448 | 40892770 | 322 | 0 |
| p63 | keratinocytes | GSE17611 | 40872891 | 40873743 | 852 | 0 |
Validated miRNA targets