AutismKB 2.0

Annotation Detail for SERTAD2


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Basic Information Top
Gene Symbol:SERTAD2 ( MGC126688,MGC126690,Sei-2,TRIP-Br2 )
Gene Full Name: SERTA domain containing 2
Band: 2p14
Quick LinksEntrez ID:9792; OMIM: NA; Uniprot ID:SRTD2_HUMAN; ENSEMBL ID: ENSG00000179833; HGNC ID: 30784
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
55Phosphothreonine(PKC)HMM predict
87O-linkedHMM predict
89O-linkedHMM predict
90Phosphoserine(IKK)HMM predict
90Phosphoserine(ATM)HMM predict
90O-linkedHMM predict
93O-linkedHMM predict
93O-linkedHMM predict
112Phosphoserine(MAPK)HMM predict
112O-linkedHMM predict
152O-linkedHMM predict
158Phosphoserine(CDC2)HMM predict
183O-linkedHMM predict
185O-linkedHMM predict
190O-linkedHMM predict
195Phosphoserine(IKK)HMM predict
195O-linkedHMM predict
201O-linkedHMM predict
263Phosphoserine(CK1)HMM predict
287O-linkedHMM predict
288Phosphoserine(ATM)HMM predict
288O-linkedHMM predict
292O-linkedHMM predict
292Phosphothreonine(MAPK)HMM predict
292Phosphothreonine(CDK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014755
  • Location:chr2 64712259-64734549
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 64733780 64735430 1650 56
PHF8 HeLaGSE20725 64733965 64735505 1540 186
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 64703349 64704284 935 8443
CTCF G2GSE9613 64706103 64706568 465 5924
CTCF G2GSE9613 64711264 64711844 580 706
hScc1 BcellGSE12603 64705175 64706279 1104 6533
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 64727053 64727272 219 0
CTCF CD4SISSRdata 64727053 64727272 219 0
CTCF G2GSE9613 64722092 64722424 332 0
CTCF G2GSE9613 64724609 64724822 213 0
CTCF G2GSE9613 64726945 64727410 465 0
ER E2-MCF7GSE14664 64730772 64730861 89 0
FOXA1 MCF7GSE15244 64724539 64725877 1338 0
H3K4me2 HCT116GSE10453 64732925 64733780 855 0
H3K4me3 colorectalcancer 64732925 64733780 855 0
H3ac HepG2E 64724539 64725994 1455 0
H3ac HepG2E 64729576 64730016 440 0
H3ac HepG2E 64732708 64734007 1299 0
Oct1 HelaGSE14283 64732878 64732906 28 0
TAF HelaGSE8489 64733064 64733960 896 0
TAF k562GSE8489 64724539 64726244 1705 0
TAF k562GSE8489 64732689 64734007 1318 0
TFAP2C MCF7GSE21234 64730277 64730633 356 0
hScc1 BcellGSE12603 64717085 64717359 274 0
hScc1 BcellGSE12603 64726945 64727366 421 0
hScc1 BcellGSE12603 64733712 64735284 1572 0
hScc1 CdLSGSE12603 64726945 64727511 566 0
hScc1 G2GSE9613 64726945 64727366 421 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-210 hsa-mir-210 11 19826008
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
14363 EST chr2 64771030 64771646 616 mRNA SERTAD2 chr2 64770406 64792697Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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