AutismKB 2.0

Annotation Detail for PSMD6


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Basic Information Top
Gene Symbol:PSMD6 ( KIAA0107,Rpn7,S10,SGA-113M,p44S10 )
Gene Full Name: proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
Band: 3p14.1
Quick LinksEntrez ID:9861; OMIM: NA; Uniprot ID:PSMD6_HUMAN; ENSEMBL ID: ENSG00000163636; HGNC ID: 9564
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014814
  • Location:chr3 63971270-63984159
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 63983981 63984504 523 83
CTCF CD4GSE12889 63991397 63991745 348 7412
CTCF CD4SISSRdata 63983981 63984504 523 83
CTCF CD4SISSRdata 63991397 63991745 348 7412
CTCF HelaGSE12889 63984127 63984445 318 127
CTCF JurkatGSE12889 63984086 63984536 450 152
CTCF JurkatGSE12889 63991404 63991666 262 7376
CTCF G2GSE9613 63983956 63984512 556 75
CTCF G2GSE9613 63991402 63991840 438 7462
ER Breast-CancerGSE22609 64000518 64001329 811 16764
ETS1 JurkatGSE17954 63983577 63984744 1167 1
H3ac HepG2E 63984266 63984777 511 362
Nanog ESGSE20650 63984114 63984472 358 134
Oct1 H2O2-HelaGSE14283 64002285 64002316 31 18141
Oct1 HelaGSE14283 63997733 63997794 61 13604
Oct1 HelaGSE14283 64002281 64002322 41 18142
RARA MCF7GSE15244 63988630 63989961 1331 5136
RARA MCF7GSE15244 63991402 63992266 864 7675
RARA MCF7GSE15244 63998847 63999892 1045 15210
RARG MCF7GSE15244 63984395 63984777 382 427
TAFII hESGSE17917 63984005 63984432 427 59
TAFII hESGSE17917 63991388 63991791 403 7430
USF1 HepG2E 63984363 63984777 414 411
hScc1 BcellGSE12603 63984024 63984477 453 91
hScc1 BcellGSE12603 63991402 63992266 864 7675
hScc1 CdLSGSE12603 63991402 63992023 621 7553
hScc1 G2GSE9613 63991402 63991876 474 7480
p130 QuiescentGSE19898 63991474 63991711 237 7433
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
RARA MCF7GSE15244 63966608 63968277 1669 3828
RARA MCF7GSE15244 63968573 63969126 553 2421
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 63975253 63975769 516 0
FOXA1 MCF7GSE15244 63982989 63984777 1788 0
H3K4me3 colorectalcancer 63982909 63984097 1188 0
H3ac HepG2E 63982545 63983848 1303 0
Myc K562GSE19551 63983806 63984402 596 0
Myc hESGSE17917 63983970 63984214 244 0
Oct1 H2O2-HelaGSE14283 63979270 63979307 37 0
PHF8 HeLaGSE20725 63983587 63984603 1016 0
PHF8 Hs68plusFBSGSE20725 63983424 63984709 1285 0
RARA MCF7GSE15244 63971335 63972846 1511 0
RARA MCF7GSE15244 63973484 63974833 1349 0
RARA MCF7GSE15244 63975107 63975769 662 0
RARA MCF7GSE15244 63976205 63976586 381 0
RARA MCF7GSE15244 63978117 63979401 1284 0
RARA MCF7GSE15244 63982545 63984777 2232 0
RARG MCF7GSE15244 63975179 63975769 590 0
RARG MCF7GSE15244 63982545 63983759 1214 0
hScc1 CdLSGSE12603 63983956 63984321 365 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
18243 mRNA chr3 63968246 63974349 457 mRNA PSMD6 chr3 63971270 63984160Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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