AutismKB 2.0

Annotation Detail for SEC24D


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Basic Information Top
Gene Symbol:SEC24D ( FLJ43974,KIAA0755 )
Gene Full Name: SEC24 family, member D (S. cerevisiae)
Band: 4q26
Quick LinksEntrez ID:9871; OMIM: 607186; Uniprot ID:SC24D_HUMAN; ENSEMBL ID: ENSG00000150961; HGNC ID: 10706
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
6Phosphotyrosine(Syk)HMM predict
6Phosphotyrosine(Jak)HMM predict
12Phosphotyrosine(Abl)HMM predict
13O-linkedHMM predict
13Phosphoserine(ATM)HMM predict
29SulfotyrosineHMM predict
37Phosphoserine(IKK)HMM predict
37Phosphoserine(CDC2)HMM predict
37Phosphoserine(CAMK2)HMM predict
107Phosphoserine(IKK)HMM predict
113O-linkedHMM predict
114O-linkedHMM predict
140Phosphoserine(ATM)HMM predict
140O-linkedHMM predict
148O-linkedHMM predict
150O-linkedHMM predict
151O-linkedHMM predict
154Phosphothreonine(CDK)HMM predict
154Phosphothreonine(CDC2)HMM predict
154Phosphothreonine(MAPK)HMM predict
162O-linkedHMM predict
168Phosphoserine(IKK)HMM predict
176O-linkedHMM predict
206Phosphotyrosine(Syk)HMM predict
206Phosphotyrosine(SRC)HMM predict
263Phosphoserine(IKK)HMM predict
306N-linkedHMM predict
308Phosphoserine(CDC2)HMM predict
412Phosphotyrosine(INSR)HMM predict
532Phosphoserine(ATM)HMM predict
553N-linkedHMM predict
711N-linkedHMM predict
712N-linkedHMM predict
728Phosphothreonine(PKC)HMM predict
738Phosphoserine(CK1)HMM predict
811N-linkedHMM predict
826Phosphoserine(CDC2)HMM predict
914Phosphoserine(CK1)HMM predict
914Phosphoserine(CK2)HMM predict
966Phosphotyrosine(Abl)HMM predict
984Phosphoserine(IKK)HMM predict
1016Phosphotyrosine(EGFR)HMM predict
1028CysteineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014822
  • Location:chr4 119863426-119976701
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 119980789 119981105 316 4246
H3ac HepG2E 119977008 119977672 664 639
Oct1 HelaGSE14283 119978872 119978918 46 2194
PHF8 293TGSE20725 119976341 119977214 873 76
Rb QuiescentGSE19898 119977120 119977474 354 596
Rb SenescentGSE19898 119977204 119977525 321 663
TAF HelaGSE8489 119976707 119977350 643 327
hScc1 BcellGSE12603 119976364 119977043 679 2
p130 QuiescentGSE19898 119976867 119977378 511 421
p130 SenescentGSE19898 119976888 119977569 681 527
p130 shRbQuiescentGSE19898 119976948 119977479 531 512
p130 shRbSenescentGSE19898 119976836 119977689 853 561
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 119912731 119913105 374 0
CTCF CD4SISSRdata 119912731 119913105 374 0
CTCF G2GSE9613 119881310 119881790 480 0
CTCF G2GSE9613 119912507 119913462 955 0
CTCF G2GSE9613 119950444 119950782 338 0
CTCF G2GSE9613 119964014 119964249 235 0
CTCF G2GSE9613 119976364 119976942 578 0
ER MCF7GSE19013 119895739 119896539 800 0
FOXA1 MCF7GSE15244 119898042 119898954 912 0
FOXA1 eGFPGSE10845 119898042 119898954 912 0
Fos K562GSE19551 119905881 119906281 400 0
Fos K562GSE19551 119951033 119951401 368 0
FoxA1 MCF7MACSdata 119898314 119898604 290 0
H3K4me3 colorectalcancer 119976001 119976325 324 0
H3ac HepG2E 119975683 119976364 681 0
Myc K562GSE19551 119907728 119908120 392 0
Nanog hESGSE18292 119944191 119944594 403 0
Oct1 H2O2-HelaGSE14283 119902707 119902743 36 0
Oct1 H2O2-HelaGSE14283 119934569 119934597 28 0
Oct1 HelaGSE14283 119868269 119868316 47 0
Oct1 HelaGSE14283 119896231 119896298 67 0
Oct1 HelaGSE14283 119898018 119898046 28 0
Oct1 HelaGSE14283 119898294 119898320 26 0
Oct1 HelaGSE14283 119902707 119902739 32 0
Oct1 HelaGSE14283 119963806 119963838 32 0
Oct1 HelaGSE14283 119969953 119969990 37 0
P300 T30-glioblastomaGSE21026 119905741 119906321 580 0
PHF8 HeLaGSE20725 119975981 119977194 1213 0
RARA MCF7GSE15244 119898122 119899064 942 0
Stat6 IL-4-hr4GSE17850 119962089 119962644 555 0
TFAP2C MCF7GSE21234 119963758 119964450 692 0
p130 QuiescentGSE19898 119975593 119976474 881 0
p130 SenescentGSE19898 119975589 119976404 815 0
p130 SenescentGSE19898 119976502 119976794 292 0
p130 shRbQuiescentGSE19898 119975651 119976649 998 0
p130 shRbSenescentGSE19898 119975640 119976770 1130 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-34a hsa-mir-34a 1 19336450
hsa-miR-34a* hsa-mir-34a 1 19336450
hsa-miR-605 hsa-mir-605 10 19336450
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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