AutismKB 2.0

Annotation Detail for ZC3H11A


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Basic Information Top
Gene Symbol:ZC3H11A ( DKFZp686D03108,DKFZp686F14109,DKFZp781G2455,KIAA0663,ZC3HDC11A )
Gene Full Name: zinc finger CCCH-type containing 11A
Band: 1q32.1
Quick LinksEntrez ID:9877; OMIM: 613513; Uniprot ID:ZC11A_HUMAN; ENSEMBL ID: ENSG00000058673; HGNC ID: 29093
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
108Phosphoserine.
116Phosphoserine.
132Phosphoserine.
149Phosphoserine.
171Phosphoserine.
290Phosphoserine.
321Phosphothreonine.
495Phosphoserine.
738Phosphoserine.
758Phosphoserine.
759Phosphoserine.
761Phosphoserine.
762Phosphothreonine.
764N6-acetyllysine.
768Phosphoserine.
Location(AA) Modifications Resource
108Phosphoserine.Swiss-Prot 53.0
108PhosphoserinePhospho.ELM 6.0
108PhosphoserinePhospho.ELM 6.0
132PhosphoserinePhospho.ELM 6.0
132PhosphoserinePhospho.ELM 6.0
132Phosphoserine.Swiss-Prot 53.0
171PhosphoserinePhospho.ELM 6.0
290PhosphoserinePhospho.ELM 6.0
290Phosphoserine.Swiss-Prot 53.0
495PhosphoserinePhospho.ELM 6.0
495Phosphoserine.Swiss-Prot 53.0
758Phosphoserine.Swiss-Prot 53.0
758PhosphoserinePhospho.ELM 6.0
759Phosphoserine (By similarity).Swiss-Prot 53.0
762Phosphothreonine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
33N-linkedHMM predict
104Phosphothreonine(PKC)HMM predict
108Phosphoserine(CK2)HMM predict
108Phosphoserine(ATM)HMM predict
108PhosphoserineHMM predict
116Phosphoserine(PKG)HMM predict
130N-linkedHMM predict
132Phosphoserine(CDK)HMM predict
132Phosphoserine(CDC2)HMM predict
149Phosphoserine(CDC2)HMM predict
149O-linkedHMM predict
171Phosphoserine(CK1)HMM predict
185O-linkedHMM predict
279Phosphoserine(PKG)HMM predict
290Phosphoserine(PKG)HMM predict
399Phosphoserine(CK1)HMM predict
400Phosphothreonine(PKC)HMM predict
425Phosphoserine(IKK)HMM predict
452O-linkedHMM predict
488Phosphoserine(IKK)HMM predict
489O-linkedHMM predict
491Phosphoserine(CK1)HMM predict
492Phosphoserine(CK1)HMM predict
493O-linkedHMM predict
493O-linkedHMM predict
494Phosphoserine(CK1)HMM predict
494Phosphoserine(IKK)HMM predict
495Phosphoserine(ATM)HMM predict
495Phosphoserine(CDC2)HMM predict
495O-linkedHMM predict
497Phosphoserine(ATM)HMM predict
502Phosphothreonine(MAPK)HMM predict
531Phosphoserine(CK1)HMM predict
561Phosphothreonine(PKC)HMM predict
576Phosphoserine(IKK)HMM predict
579Phosphothreonine(CDK)HMM predict
640Phosphothreonine(PKC)HMM predict
690Phosphoserine(CK1)HMM predict
715Phosphothreonine(PKC)HMM predict
733O-linkedHMM predict
734O-linkedHMM predict
735Phosphoserine(ATM)HMM predict
738Phosphoserine(IKK)HMM predict
746O-linkedHMM predict
748Phosphoserine(ATM)HMM predict
758Phosphoserine(PKG)HMM predict
758Phosphoserine(PKA)HMM predict
758Phosphoserine(PKC)HMM predict
768Phosphoserine(ATM)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014827
  • Location:chr1 202031373-202089877
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FoxA1 MCF7MACSdata 202025678 202025967 289 5551
P300 T0-glioblastomaGSE21026 202030753 202031855 1102 70
P300 T30-glioblastomaGSE21026 202030715 202031777 1062 128
RARA MCF7GSE15244 202025702 202025887 185 5579
RARG MCF7GSE15244 202025702 202025887 185 5579
TAF k562GSE8489 202030853 202031257 404 319
TFAP2C MCF7GSE21234 202025662 202026041 379 5522
USF2 HepG2E 202030853 202031367 514 264
p130 QuiescentGSE19898 202031096 202031397 301 127
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 202030754 202032595 1841 0
H3K4me3 colorectalcancer 202031986 202032730 744 0
H3ac HepG2E 202031845 202032837 992 0
PHF8 Hs68minusFBSGSE20725 202030930 202032371 1441 0
TAF k562GSE8489 202031913 202033603 1690 0
USF1 HepG2E 202030853 202032204 1351 0
p130 QuiescentGSE19898 202031477 202031866 389 0
p130 SenescentGSE19898 202031376 202031916 540 0
p130 shRbQuiescentGSE19898 202031437 202032024 587 0
p130 shRbSenescentGSE19898 202031371 202031978 607 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
2193 mRNA ZC3HDC11A chr1 200500119 200554906 671 mRNA chr1 200500957 200501628Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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