Annotation Detail for NCAPD2
Basic Information Top
| Gene Symbol: | NCAPD2 ( CAP-D2,CNAP1,KIAA0159,hCAP-D2 ) |
|---|---|
| Gene Full Name: | non-SMC condensin I complex, subunit D2 |
| Band: | 12p13.31 |
| Quick Links | Entrez ID:9918; OMIM: NA; Uniprot ID:CND1_HUMAN; ENSEMBL ID: ENSG00000010292; HGNC ID: 24305 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 103 | Phosphothreonine. | |
| 577 | Phosphothreonine. | |
| 585 | Phosphoserine. | |
| 586 | Phosphothreonine. | |
| 1310 | Phosphoserine. | |
| 1330 | Phosphoserine. | |
| 1331 | Phosphothreonine. | |
| 1333 | Phosphoserine. | |
| 1339 | Phosphothreonine; by CDK1 (By | |
| 1362 | Bipartite nuclear localization signal. | |
| 1366 | Phosphoserine. | |
| 1367 | Phosphoserine. | |
| 1370 | Phosphoserine. | |
| 1371 | Phosphoserine. | |
| 1376 | Phosphoserine. | |
| 1384 | Phosphothreonine; by CDK1 (By | |
| 1388 | Phosphothreonine. | |
| 1389 | Phosphothreonine; by CDK1 (By | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 103 | Phosphothreonine. | Swiss-Prot 53.0 |
| 103 | Phosphothreonine | Phospho.ELM 6.0 |
| 585 | Phosphoserine. | Swiss-Prot 53.0 |
| 585 | Phosphoserine | Phospho.ELM 6.0 |
| 1330 | Phosphoserine. | Swiss-Prot 53.0 |
| 1330 | Phosphoserine | Phospho.ELM 6.0 |
| 1331 | Phosphothreonine | Phospho.ELM 6.0 |
| 1331 | Phosphothreonine. | Swiss-Prot 53.0 |
| 1333 | Phosphoserine | Phospho.ELM 6.0 |
| 1333 | Phosphoserine. | Swiss-Prot 53.0 |
| 1339 | Phosphothreonine (by CDC2) (Bysimilarity). | Swiss-Prot 53.0 |
| 1366 | Phosphoserine. | Swiss-Prot 53.0 |
| 1367 | Phosphoserine. | Swiss-Prot 53.0 |
| 1370 | Phosphoserine. | Swiss-Prot 53.0 |
| 1371 | Phosphoserine. | Swiss-Prot 53.0 |
| 1376 | Phosphoserine. | Swiss-Prot 53.0 |
| 1384 | Phosphothreonine (by CDC2) (Bysimilarity). | Swiss-Prot 53.0 |
| 1388 | Phosphothreonine. | Swiss-Prot 53.0 |
| 1388 | Phosphothreonine | Phospho.ELM 6.0 |
| 1389 | Phosphothreonine (by CDC2) (Bysimilarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 13 | Phosphoserine(ATM) | HMM predict |
| 13 | Phosphoserine(MAPK) | HMM predict |
| 26 | Phosphotyrosine(Jak) | HMM predict |
| 33 | Phosphoserine(CK1) | HMM predict |
| 64 | Sulfotyrosine | HMM predict |
| 186 | N-linked | HMM predict |
| 201 | S-palmitoyl | HMM predict |
| 202 | S-palmitoyl | HMM predict |
| 208 | N-linked | HMM predict |
| 212 | N-linked | HMM predict |
| 298 | O-linked | HMM predict |
| 331 | Phosphotyrosine(INSR) | HMM predict |
| 466 | Phosphothreonine(PKA) | HMM predict |
| 528 | Phosphoserine(PKG) | HMM predict |
| 557 | Phosphoserine(CK1) | HMM predict |
| 601 | N-linked | HMM predict |
| 648 | N-linked | HMM predict |
| 829 | Phosphoserine(PKG) | HMM predict |
| 829 | Phosphoserine(PKC) | HMM predict |
| 907 | Phosphoserine(IKK) | HMM predict |
| 907 | Phosphoserine(CK1) | HMM predict |
| 970 | N-linked | HMM predict |
| 971 | Phosphothreonine(CK2) | HMM predict |
| 972 | Phosphoserine(CK1) | HMM predict |
| 976 | Phosphothreonine(CK2) | HMM predict |
| 1028 | Phosphotyrosine(INSR) | HMM predict |
| 1028 | Phosphotyrosine(Abl) | HMM predict |
| 1034 | O-linked | HMM predict |
| 1310 | Phosphoserine(ATM) | HMM predict |
| 1315 | Phosphoserine(PKC) | HMM predict |
| 1315 | Phosphoserine | HMM predict |
| 1339 | Phosphothreonine(CDC2) | HMM predict |
| 1345 | Phosphothreonine(PKC) | HMM predict |
| 1346 | Phosphothreonine(PKC) | HMM predict |
| 1346 | Phosphothreonine(PKA) | HMM predict |
| 1370 | Phosphoserine(CK2) | HMM predict |
| 1370 | Phosphoserine(CK1) | HMM predict |
| 1371 | Phosphoserine(CK1) | HMM predict |
| 1380 | Phosphothreonine(CK2) | HMM predict |
| 1384 | Phosphothreonine(CDC2) | HMM predict |
| 1384 | Phosphothreonine(MAPK) | HMM predict |
| 1384 | Phosphothreonine(CDK) | HMM predict |
| 1389 | Phosphothreonine(PKA) | HMM predict |
- RefSeq ID: NM_014865
- Location:chr12 6473557-6511069
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| E2F4 | G0 | GSE7516 | 6473131 | 6473979 | 848 | 3 |
| Fos | K562 | GSE19551 | 6472606 | 6473792 | 1186 | 359 |
| LIN9 | G0 | GSE7516 | 6472512 | 6474014 | 1502 | 295 |
| p130 | Senescent | GSE19898 | 6472403 | 6473899 | 1496 | 407 |
| p130 | shRbSenescent | GSE19898 | 6472463 | 6474019 | 1556 | 317 |
| p130 | S | GSE7516 | 6472858 | 6474050 | 1192 | 104 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 6512213 | 6512428 | 215 | 1251 |
| FOXA1 | MCF7 | GSE15244 | 6511841 | 6512029 | 188 | 866 |
| H3ac | HepG2 | E | 6511486 | 6513139 | 1653 | 1243 |
| hScc1 | Bcell | GSE12603 | 6511486 | 6511995 | 509 | 671 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 6505366 | 6505679 | 313 | 0 |
| CTCF | G2 | GSE9613 | 6507842 | 6508027 | 185 | 0 |
| H3K4me3 | colorectal | cancer | 6473693 | 6474337 | 644 | 0 |
| H3ac | HepG2 | E | 6473582 | 6475439 | 1857 | 0 |
| LIN9 | S | GSE7516 | 6472782 | 6474540 | 1758 | 0 |
| RARG | MCF7 | GSE15244 | 6508201 | 6508478 | 277 | 0 |
| TAF | Hela | GSE8489 | 6473582 | 6474874 | 1292 | 0 |
| TFAP2C | MCF7 | GSE21234 | 6508188 | 6509148 | 960 | 0 |
| p130 | G0 | GSE7516 | 6473131 | 6474014 | 883 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5572 | mRNA | CNAP1 | chr12 | 6472805 | 6511381 | 387 | EST | chr12 | 6471761 | 6473343 | Sense/Antisense (SA) pairs | |