AutismKB 2.0

Annotation Detail for PAN2


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Basic Information Top
Gene Symbol:PAN2 ( FLJ39360,KIAA0710,USP52 )
Gene Full Name: PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
Band: 12q13.3
Quick LinksEntrez ID:9924; OMIM: NA; Uniprot ID:PAN2_HUMAN; ENSEMBL ID: ENSG00000135473; HGNC ID: 20074
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
791Phosphoserine.
1189Phosphoserine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014871
  • Location:chr12 54996987-55014016
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 55014169 55014509 340 323
CTCF CD4SISSRdata 55014169 55014509 340 323
CTCF G2GSE9613 55013826 55014864 1038 329
ETS1 JurkatGSE17954 55013494 55014757 1263 109
Fos K562GSE19551 55013360 55014856 1496 92
LIN9 SGSE7516 55013804 55014409 605 90
PHF8 293TGSE20725 55013429 55014727 1298 62
PHF8 HeLaGSE20725 55013449 55014631 1182 24
RARA MCF7GSE15244 55013596 55015214 1618 389
RARG MCF7GSE15244 55013596 55014719 1123 141
TAF HelaGSE8489 55013768 55015182 1414 459
p130 G0GSE7516 55013804 55014445 641 108
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 55002695 55002864 169 0
CTCF G2GSE9613 55003719 55004297 578 0
CTCF G2GSE9613 55004611 55004998 387 0
FOXA1 MCF7GSE15244 55012824 55014719 1895 0
H3K4me2 HCT116GSE10453 55012675 55013056 381 0
H3ac HepG2E 55012675 55015214 2539 0
LIN9 G0GSE7516 55013596 55014409 813 0
PolII HeLaGSE12783 55012673 55015138 2465 0
RARA MCF7GSE15244 55008427 55008865 438 0
RARG MCF7GSE15244 55008101 55008865 764 0
Rb GrowingGSE19898 55013858 55014081 223 0
Rb QuiescentGSE19898 55013727 55014104 377 0
hScc1 BcellGSE12603 54996889 54997094 205 0
p130 QuiescentGSE19898 55013749 55014252 503 0
p130 SenescentGSE19898 55013457 55014323 866 0
p130 shRbQuiescentGSE19898 55013123 55014227 1104 0
p130 shRbSenescentGSE19898 55013732 55014272 540 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
6135 EST chr12 55013518 55020459 23 mRNA USP52 chr12 54996987 55013714Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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