AutismKB 2.0

Annotation Detail for WDR1


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Basic Information Top
Gene Symbol:WDR1 ( AIP1,NORI-1 )
Gene Full Name: WD repeat domain 1
Band: 4p16.1
Quick LinksEntrez ID:9948; OMIM: 604734; Uniprot ID:WDR1_HUMAN; ENSEMBL ID: ENSG00000071127; HGNC ID: 12754
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
28N6-acetyllysine.
81N6-acetyllysine.
95N6-acetyllysine.
115N6-acetyllysine.
238Phosphotyrosine.
480N6-acetyllysine.
Location(AA) Modifications Resource
237PhosphotyrosinePhospho.ELM 6.0
238Phosphotyrosine.Swiss-Prot 53.0
Location(AA) Modification Resource
88PhosphothreonineHMM predict
243Phosphoserine(IKK)HMM predict
246O-linkedHMM predict
300Phosphotyrosine(INSR)HMM predict
308N-linkedHMM predict
372Phosphothreonine(PKC)HMM predict
420Phosphotyrosine(INSR)HMM predict
420Phosphotyrosine(Abl)HMM predict
446Phosphotyrosine(INSR)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005112
  • Location:chr4 9685060-9727670
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 9736821 9737137 316 9309
CTCF G2GSE9613 9741929 9742745 816 14667
CTCF G2GSE9613 9744260 9744580 320 16750
CTCF G2GSE9613 9745131 9745280 149 17535
GABP HelaGSE8489 9745068 9745916 848 17822
H3ac HepG2E 9727909 9729703 1794 1136
H3ac HepG2E 9730035 9731434 1399 3064
H3ac HepG2E 9731760 9732659 899 4539
Oct4 hESGSE17917 9746967 9747117 150 19372
Pol2 GM12878GSE19551 9727727 9729699 1972 1043
Rb GrowingGSE19898 9729886 9730078 192 2312
TFAP2C MCF7GSE21234 9727734 9728018 284 206
TFAP2C MCF7GSE21234 9732930 9733451 521 5520
hScc1 G2GSE9613 9744025 9744511 486 16598
p130 QuiescentGSE19898 9727747 9728031 284 219
p130 SenescentGSE19898 9727719 9728120 401 249
p130 shRbQuiescentGSE19898 9727491 9728406 915 278
p130 shRbSenescentGSE19898 9727694 9728170 476 262
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 9674506 9674686 180 10465
CTCF G2GSE9613 9679894 9680479 585 4874
CTCF G2GSE9613 9681896 9682147 251 3039
Nanog hESGSE18292 9674068 9674604 536 10725
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 9716909 9718104 1195 0
CTCF CD4GSE12889 9685478 9685671 193 0
CTCF CD4GSE12889 9706905 9707096 191 0
CTCF CD4SISSRdata 9685478 9685671 193 0
CTCF CD4SISSRdata 9706905 9707096 191 0
CTCF G2GSE9613 9685225 9687158 1933 0
CTCF G2GSE9613 9688271 9689037 766 0
CTCF G2GSE9613 9689359 9689916 557 0
CTCF G2GSE9613 9690794 9691169 375 0
CTCF G2GSE9613 9692776 9692918 142 0
CTCF G2GSE9613 9693499 9693917 418 0
CTCF G2GSE9613 9694263 9694551 288 0
CTCF G2GSE9613 9696224 9697859 1635 0
CTCF G2GSE9613 9698116 9698418 302 0
CTCF G2GSE9613 9699406 9699828 422 0
CTCF G2GSE9613 9700143 9700538 395 0
CTCF G2GSE9613 9701715 9704723 3008 0
CTCF G2GSE9613 9705594 9705994 400 0
CTCF G2GSE9613 9707345 9708178 833 0
CTCF G2GSE9613 9708656 9708796 140 0
CTCF G2GSE9613 9711639 9712163 524 0
CTCF G2GSE9613 9712614 9712853 239 0
CTCF G2GSE9613 9713459 9713703 244 0
CTCF G2GSE9613 9714508 9714759 251 0
CTCF G2GSE9613 9718376 9718727 351 0
CTCF G2GSE9613 9720493 9721094 601 0
CTCF G2GSE9613 9721354 9722611 1257 0
CTCF G2GSE9613 9725507 9725827 320 0
CTCF G2GSE9613 9726770 9728124 1354 0
Fos K562GSE19551 9717267 9717794 527 0
H3K4me3 colorectalcancer 9726655 9727009 354 0
Oct1 H2O2-HelaGSE14283 9705186 9705223 37 0
Oct1 HelaGSE14283 9705185 9705222 37 0
Oct1 HelaGSE14283 9717380 9717439 59 0
P300 T30-glioblastomaGSE21026 9716778 9718502 1724 0
PHF8 HeLaGSE20725 9726516 9728333 1817 0
PolII HeLaGSE12783 9725380 9729887 4507 0
Rb GrowingGSE19898 9726736 9726863 127 0
Rb GrowingGSE19898 9727351 9727594 243 0
Rb QuiescentGSE19898 9695005 9695146 141 0
TFAP2C MCF7GSE21234 9706696 9707301 605 0
hScc1 BcellGSE12603 9690837 9691087 250 0
hScc1 BcellGSE12603 9695357 9695772 415 0
hScc1 BcellGSE12603 9696605 9697206 601 0
hScc1 BcellGSE12603 9700285 9700538 253 0
hScc1 BcellGSE12603 9702194 9702343 149 0
hScc1 BcellGSE12603 9703356 9704366 1010 0
hScc1 BcellGSE12603 9721162 9722390 1228 0
hScc1 BcellGSE12603 9726929 9727415 486 0
hScc1 G2GSE9613 9726686 9727945 1259 0
p130 shRbQuiescentGSE19898 9706788 9707520 732 0
p130 shRbSenescentGSE19898 9706616 9707234 618 0
p130 shRbSenescentGSE19898 9707345 9707608 263 0
p130 shRbSenescentGSE19898 9727367 9727592 225 0
p63 keratinocytesGSE17611 9698897 9699846 949 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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