AutismKB 2.0

Annotation Detail for SLC23A2


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Basic Information Top
Gene Symbol:SLC23A2 ( KIAA0238,NBTL1,SLC23A1,SVCT2,YSPL2 )
Gene Full Name: solute carrier family 23 (nucleobase transporters), member 2
Band: 20p13
Quick LinksEntrez ID:9962; OMIM: 603791; Uniprot ID:S23A2_HUMAN; ENSEMBL ID: ENSG00000089057; HGNC ID: 10973
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
78Phosphoserine (By similarity).
79Phosphothreonine (By similarity).
81Phosphoserine.
188N-linked (GlcNAc...) (Potential).
196N-linked (GlcNAc...) (Potential).
649Phosphothreonine (By similarity).
Location(AA) Modifications Resource
78Phosphoserine (By similarity).Swiss-Prot 53.0
188N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
196N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
7N-linkedHMM predict
19Phosphothreonine(PKC)HMM predict
23SulfotyrosineHMM predict
23Phosphotyrosine(SRC)HMM predict
23Phosphotyrosine(INSR)HMM predict
71Phosphoserine(IKK)HMM predict
188N-linkedHMM predict
196N-linkedHMM predict
246O-linkedHMM predict
399Phosphotyrosine(Jak)HMM predict
436N-linkedHMM predict
439O-linkedHMM predict
440Phosphoserine(CDC2)HMM predict
440O-linkedHMM predict
442Phosphoserine(CDC2)HMM predict
575Phosphothreonine(MAPK)HMM predict
575Phosphothreonine(CDK)HMM predict
622Phosphoserine(CDC2)HMM predict
641Phosphoserine(CK2)HMM predict
641Phosphoserine(CK2)HMM predict
641Phosphoserine(CK1)HMM predict
642Phosphoserine(CK1)HMM predict
646Phosphoserine(ATM)HMM predict
646Phosphoserine(CK1)HMM predict
646Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005116
  • Location:chr20 4781001-4930144
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 4767468 4767818 350 13359
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 4797950 4798790 840 0
CTCF CD4GSE12889 4884906 4885239 333 0
CTCF CD4SISSRdata 4884906 4885239 333 0
CTCF HelaGSE12889 4884928 4885169 241 0
FOXA1 MCF7GSE15244 4797998 4798907 909 0
FOXA1 eGFPGSE10845 4797998 4798907 909 0
FoxA1 MCF7MACSdata 4798147 4798574 427 0
FoxA1 MCF7MACSdata 4866234 4866463 229 0
H3ac HepG2E 4928842 4929384 542 0
KLF4 hESGSE17917 4849393 4849554 161 0
KLF4 hESGSE17917 4929505 4929898 393 0
Myc K562GSE19551 4825530 4825904 374 0
NFkBII GM12892GSE19485 4900590 4901461 871 0
NRSF-mono JurkatQuESTdata 4790683 4790944 261 0
Nanog hESGSE18292 4878595 4878907 312 0
P300 T30-glioblastomaGSE21026 4797882 4798919 1037 0
Rb shRbQuiescentGSE19898 4865420 4865606 186 0
TFAP2C MCF7GSE21234 4795737 4796268 531 0
USF1 HepG2E 4890397 4891331 934 0
USF1 HepG2E 4901696 4902791 1095 0
USF1 HepG2E 4927784 4929431 1647 0
USF2 HepG2E 4895348 4896884 1536 0
USF2 HepG2E 4901543 4902791 1248 0
USF2 HepG2E 4928373 4929351 978 0
hScc1 BcellGSE12603 4795672 4795936 264 0
hScc1 BcellGSE12603 4798546 4798836 290 0
hScc1 BcellGSE12603 4824966 4825255 289 0
hScc1 BcellGSE12603 4825568 4825939 371 0
hScc1 BcellGSE12603 4878437 4878908 471 0
hScc1 BcellGSE12603 4884846 4885271 425 0
hScc1 BcellGSE12603 4929585 4930398 813 0
hScc1 CdLSGSE12603 4878147 4878956 809 0
p130 shRbQuiescentGSE19898 4902130 4902477 347 0
p63 keratinocytesGSE17611 4927674 4928459 785 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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