Annotation Detail for SCO2
Basic Information Top
| Gene Symbol: | SCO2 ( MGC125823,MGC125825,SCO1L ) |
|---|---|
| Gene Full Name: | SCO cytochrome oxidase deficient homolog 2 (yeast) |
| Band: | 22q13.33 |
| Quick Links | Entrez ID:9997; OMIM: 604272; Uniprot ID:SCO2_HUMAN; ENSEMBL ID: ENSG00000130489; HGNC ID: 10604 |
| Relate to Another Database: | SFARIGene; denovo-db |
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| Location(AA) | Modification | Resource |
|---|---|---|
| 220 | Sulfotyrosine | HMM predict |
| 240 | Phosphotyrosine(Syk) | HMM predict |
| 246 | Phosphoserine | HMM predict |
| 263 | Serine | HMM predict |
- RefSeq ID: NM_005138
- Location:chr22 49308864-49310837
- strand:-
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| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 49309502 | 49309861 | 359 | 0 |
| H3ac | HepG2 | E | 49309760 | 49310557 | 797 | 0 |
| PHF8 | HeLa | GSE20725 | 49309089 | 49312581 | 3492 | 0 |
| USF1 | HepG2 | E | 49309826 | 49310593 | 767 | 0 |
| hScc1 | Bcell | GSE12603 | 49308413 | 49312133 | 3720 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17671 | EST | chr22 | 49251107 | 49252309 | 157 | mRNA | SCO2 | chr22 | 49252142 | 49254116 | Sense/Antisense (SA) pairs | |