Copy Number Variation Related Gene List
- We collected all the Copy Number Variants(CNVs) from related studies in the dataset. If the study gave the exact start and end point, we collected all the genes in the given region; if not, we deduced genomic region from the band, and collected all the genes in the band.
- According to the number of related studies, genes in the dataset are scored 3, 2, 1. If one gene have 2 or more relate studies, and each study has at least one exact region for this gene, the gene will be listed below. The higher the score, the more confident the gene is. (More information about the dataset)
| Gene ID | Gene Symbol | Band | Gene Name | #CNV studies | Score | |
|---|---|---|---|---|---|---|
| #Studies with exact region | #Studies with deduced region | |||||
| AutG9378 | NRXN1 | 2p16.3 | neurexin 1 | 9 | 7 | 3 |
| AutG2562 | GABRB3 | 15q12 | gamma-aminobutyric acid (GABA) A receptor, beta 3 | 12 | 13 | 3 |
| AutG2558 | GABRA5 | 15q12 | gamma-aminobutyric acid (GABA) A receptor, alpha 5 | 9 | 13 | 3 |
| AutG23191 | CYFIP1 | 15q11.2 | cytoplasmic FMR1 interacting protein 1 | 10 | 10 | 3 |
| AutG123606 | NIPA1 | 15q11.2 | non imprinted in Prader-Willi/Angelman syndrome 1 | 10 | 10 | 3 |
| AutG161725 | OTUD7A | 15q13.3 | OTU domain containing 7A | 9 | 11 | 3 |
| AutG4308 | TRPM1 | 15q13.3 | transient receptor potential cation channel, subfamily M, member 1 | 9 | 14 | 3 |
| AutG89839 | ARHGAP11B | 15q13.2 | Rho GTPase activating protein 11B | 9 | 12 | 3 |
| AutG1139 | CHRNA7 | 15q13.3 | cholinergic receptor, nicotinic, alpha 7 | 9 | 11 | 3 |
| AutG114791 | TUBGCP5 | 15q11.2 | tubulin, gamma complex associated protein 5 | 11 | 10 | 3 |
| AutG2567 | GABRG3 | 15q12 | gamma-aminobutyric acid (GABA) A receptor, gamma 3 | 10 | 14 | 3 |
| AutG54893 | MTMR10 | 15q13.3 | myotubularin related protein 10 | 9 | 12 | 3 |
| AutG8924 | HERC2 | 15q13.1 | hect domain and RLD 2 | 9 | 12 | 3 |
| AutG81614 | NIPA2 | 15q11.2 | non imprinted in Prader-Willi/Angelman syndrome 2 | 10 | 10 | 3 |
| AutG390538 | OR4M2 | 15q11.2 | olfactory receptor, family 4, subfamily M, member 2 | 9 | 5 | 3 |
| AutG727924 | LOC727924 | 15q11.2 | - | 9 | 5 | 3 |
| AutG54551 | MAGEL2 | 15q11.2 | MAGE-like 2 | 9 | 8 | 3 |
| AutG283694 | OR4N4 | 15q11.2 | olfactory receptor, family 4, subfamily N, member 4 | 9 | 5 | 3 |
| AutG85358 | SHANK3 | 22q13.33 | SH3 and multiple ankyrin repeat domains 3 | 8 | 6 | 2 |
| AutG57680 | CHD8 | 14q11.2 | chromodomain helicase DNA binding protein 8 | 5 | 0 | 2 |