AutismKB 2.0

Copy Number Variation Related Gene List


We collected all the Copy Number Variants(CNVs) from related studies in the dataset. If the study gave the exact start and end point, we collected all the genes in the given region; if not, we deduced genomic region from the band, and collected all the genes in the band.
According to the number of related studies, genes in the dataset are scored 3, 2, 1. If one gene have 2 or more relate studies, and each study has at least one exact region for this gene, the gene will be listed below. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Gene Name #CNV studies Score
#Studies with exact region #Studies with deduced region
AutG1417 CRYBB3 22q11.23 crystallin, beta B3 3 1 1
AutG100130717 CECR4 22q11.1 cat eye syndrome chromosome region, candidate 4 (non-protein coding) 2 0 1
AutG100124542 SNORA11E Xp11.22 small nucleolar RNA, H/ACA box 11E 2 3 1
AutG9567 GTPBP1 22q13.1 GTP binding protein 1 2 0 1
AutG9210 BMP15 Xp11.22 bone morphogenetic protein 15 2 3 1
AutG11015 KDELR3 22q13.1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 2 0 1
AutG390648 OR4F6 15q26.3 olfactory receptor, family 4, subfamily F, member 6 2 2 1
AutG203074 PRSS55 8p23.1 protease, serine, 55 2 1 1
AutG50628 GEMIN4 17p13.3 gem (nuclear organelle) associated protein 4 2 1 1
AutG10526 IPO8 12p11.21 importin 8 2 1 1
AutG9617 MTRF1 13q14.11 mitochondrial translational release factor 1 2 1 1
AutG79660 PPP1R3B 8p23.1 protein phosphatase 1, regulatory (inhibitor) subunit 3B 2 0 1
AutG79917 MAGIX Xp11.23 MAGI family member, X-linked 2 3 1
AutG91694 LONRF1 8p23.1 LON peptidase N-terminal domain and ring finger 1 2 1 1
AutG55020 TTC38 22q13.31 tetratricopeptide repeat domain 38 3 2 1
AutG653423 SPAG11A 8p23.1 sperm associated antigen 11A 2 0 1
AutG129138 ANKRD54 22q13.1 ankyrin repeat domain 54 2 0 1
AutG28227 PPP2R3B Xp22.3 and Yp11.3 protein phosphatase 2, regulatory subunit B'', beta 2 2 1
AutG1671 DEFA6 8p23.1 defensin, alpha 6, Paneth cell-specific 2 3 1
AutG4242 MFNG 22q13.1 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 2 0 1
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Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018