AutismKB 2.0

View de novo Variants from PubMed ID: 24650168


Notes:
*iFish(Wang M, Wei L, PIMD: 27527004) is a supporting vector machine (SVM) based classifier which uses gene and gene family specific attributes.
iFish utilized customized prediction cutoff for each classifier that maximizes the sum of sensitivity andspecificity.


Gene ID Gene Symbol Chr Position Effect Ref Alt Coding Change Protein Change Validation iFish Probability iFish Prediction
AutG6326SCN2A 2 166164448 splice-site G A c.476?+?1G?>?A Sanger sequencing
AutG7088TLE1 9 84199163 missense C T c.2263G?>?A p.Val755Ile Sanger sequencing 0.0223 neutral
AutG699BUB1 2 111398623 synonymous T C c.2943A?>?G Sanger sequencing
AutG79741C10orf68 10 32856654 synonymous T A c.1254 T?>?A Sanger sequencing

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018