#Chromosome coordinates: hg19 #gene_symbol chr pos ref alt pubmed_id iFish_probability iFish_prediction TGM3 20 2291665 G A 21572417 0.993 deleterious LAMC3 9 133914290 A G 21572417 0.5885 deleterious MYO1A 12 57422391 21572417 GPR139 16 20043668 T C 21572417 0.0827 neutral SCN1A 2 166848071 21572417 PLCD1 3 38058203 21572417 SYNE1 6 152823811 21572417 TAF1L 9 32629906 21572417 DCTN5 16 23678493 21572417 SLC30A5 5 68417634 21572417 0.047 neutral IL1R2 2 102626046 21572417 AFF4 5 132223552 21572417 GRIN2B 12 13722953 21572417 EPHB6 7 142564780 21572417 ARHGAP15 2 144008169 21572417 XIRP1 3 39229490 21572417 CHST5 16 75563974 21572417 TTN 2 179437710 21572417 TLK2 17 60679466 21572417 RBMS3 3 30029683 21572417 FOXP1 3 71050170 21572417 SORCS1 10 108447964 C T 22495306 0.884 deleterious KATNAL2 18 44589733 G R 22495306 DNAH5 5 13883123 C T 22495306 0.3085 neutral USP46 4 53492207 G R 22495306 WDR4 21 44270292 G R 22495306 GON4L 1 155736011 G A 22495306 NR2F1 5 92929487 G A 22495306 0.9507 deleterious TCF7L1 2 85529727 G T 22495306 0.931 deleterious IQGAP3 1 156503911 G S 22495306 FEZF2 3 62356982 G R 22495306 FREM3 4 144620325 G R 22495306 RAB2A 8 61484622 C T 22495306 SUPT16H 14 21828671 C T 22495306 0.9061 deleterious NLRP11 19 56320401 C T 22495306 CCDC14 3 123663756 A R 22495306 TROAP 12 49725038 C Y 22495306 GALC 14 88407884 C Y 22495306 KANK1 9 712508 G A 22495306 0.7109 deleterious SCN2A 2 166210819 G T 22495306 GNAS 20 57484241 C S 22495306 BTN1A1 6 26508728 G R 22495306 SLC22A9 11 63177324 C T 22495306 0.9905 deleterious C18orf26 18 52265167 G T 22495306 0.0185 neutral TET1 10 70333978 A G 22495306 0.5118 deleterious FBXO18 10 5963470 G A 22495306 0.6758 deleterious LCN10 9 139636334 G A 22495306 0.0787 neutral SLC6A13 12 332363 G A 22495306 0.9896 deleterious GRIK5 19 42563657 C A 22495306 LTBP1 2 33572486 A C 22495306 0.0549 neutral ZNF335 20 44582508 G A 22495306 0.0777 neutral BRD1 22 50167925 G A 22495306 0.6018 deleterious GREB1L 18 19093823 C T 22495306 DOM3Z 6 31938187 C T 22495306 0.8336 deleterious SLC26A5 7 103014942 G C 22495306 0.0256 neutral SV2B 15 91825013 T A 22495306 0.503 deleterious IL20RB 3 136708288 C G 22495306 0.792 deleterious NAPRT1 8 144659231 C T 22495306 EFR3A 8 132982744 T C 22495306 0.9888 deleterious CASK X 41524649 C T 22495306 0.9794 deleterious DBNL 7 44100380 C T 22495306 SNRK 3 43389739 A G 22495306 0.0209 neutral NPFFR2 4 72994491 G A 22495306 0.1006 neutral MADD 11 47304002 C T 22495306 0.975 deleterious KIAA0317 14 75142520 G A 22495306 0.2972 neutral GBP6 1 89846006 A G 22495306 OR6N2 1 158746730 T C 22495306 GRM7 3 7620458 G A 22495306 0.9921 deleterious MYB 6 135507151 G A 22495306 0.9898 deleterious PPP2R1B 11 111626054 G A 22495306 0.539 deleterious TMEM85 15 34520732 C G 22495306 0.8288 deleterious ABI3BP 3 100471643 C T 22495306 0.9208 deleterious GPR98 5 89949288 G A 22495306 0.6451 deleterious SMC3 10 112359556 C T 22495306 0.9551 deleterious SUV420H1 11 67939039 C G 22495306 0.7272 deleterious FCRL6 1 159778750 G A 22495306 KIAA0182 16 85691078 G A 22495306 0.6419 deleterious ANK3 10 61833827 A G 22495306 0.9494 deleterious OR5AC2 3 97806680 C T 22495306 0.237 neutral MDN1 6 90402347 G C 22495306 0.22 neutral SEC22C 3 42610365 A G 22495306 NSUN7 4 40762471 A C 22495306 0.8135 deleterious HMHA1 19 1079991 T Y 22495306 ANKRD35 1 145561197 G A 22495306 SCP2 1 53416506 * D:TG 22495306 TJP3 19 3743971 C T 22495306 TUBA1A 12 49579631 G A 22495306 0.6438 deleterious SUV420H1 11 67926275 G A 22495306 0.5290 neutral CHRND 2 233396326 G A 22495306 0.1232 neutral GOLGA3 12 133381371 C S 22495306 0.3708 neutral EIF2C1 1 36367118 C T 22495306 0.9177 deleterious KIAA0100 17 26961787 G A 22495306 0.9129 deleterious ITSN2 2 24518595 C T 22495306 0.0927 neutral NF1 17 29677317 C M 22495306 PLOD3 7 100856461 C Y 22495306 C2orf42 2 70392261 T C 22495306 0.2899 neutral LPHN1 19 14268081 G A 22495306 DGCR14 22 19127459 T C 22495306 0.9738 deleterious MYH9 22 36684831 C T 22495306 0.9995 deleterious EBAG9 8 110576670 A T 22495306 0.7527 deleterious TRRAP 7 98506430 G A 22495306 0.9956 deleterious SCN2A 2 166201379 C A 22495306 TMEM8A 16 426580 C T 22495306 0.0876 neutral TRPM7 15 50923683 T C 22495306 0.297 neutral RFX8 2 102083246 A C 22495306 0.148 neutral LASS6 2 169417831 A G 22495306 L3MBTL1 20 42169759 T G 22495306 0.3042 deleterious MEGF11 15 66198459 G A 22495306 0.4317 neutral RNF38 9 36375929 A G 22495306 POPDC2 3 119367114 G A 22495306 FGD3 9 95782633 A G 22495306 0.5565 deleterious MPHOSPH8 13 20235898 C T 22495306 CYP4F3 19 15763419 C T 22495306 0.8051 deleterious AADACL2 3 151451960 C T 22495306 0.3821 neutral NAV2 11 20139742 G A 22495306 0.558 deleterious GTF2IRD1 7 73969529 A G 22495306 0.4939 deleterious LLGL1 17 18140835 C T 22495306 0.002 neutral ATP2B4 1 203652386 G A 22495306 0.0068 neutral NCAPD2 12 6630268 T C 22495306 0.4953 neutral GPR139 16 20043668 T C 22495306 0.0827 neutral PPM1D 17 58740376 G A 22495306 BCORL1 X 129149138 G A 22495306 0.3901 deleterious DISC1 1 231829616 C T 22495306 0.0601 neutral HIGD2A 5 175816383 G A 22495306 0.1176 neutral C9orf144B 9 34728650 C G 22495306 SHANK2 11 70332092 * D:TG 22495306 DNAH9 17 11806196 C T 22495306 0.0434 neutral DNMT3A 2 25464520 C A 22495306 0.1703 neutral MMP8 11 102593283 G A 22495306 0.2405 neutral MTMR9 8 11172535 C A 22495306 0.8122 deleterious ZNF213 16 3190740 C S 22495306 KIAA0556 16 27692808 C M 22495306 NLRX1 11 119045475 C Y 22495306 ADAM33 20 3655475 G R 22495306 SLC30A5 5 68417634 C G 22495306 0.047 neutral CPZ 4 8620162 C T 22495306 0.0953 neutral ZNF642 1 40961433 A G 22495306 0.0802 neutral SRGAP3 3 9089078 C T 22495306 0.9457 deleterious IL1R2 2 102626046 T C 22495306 AFF4 5 132223552 C T 22495306 MR1 1 181021601 C T 22495306 0.0337 neutral SEMA4G 10 102740667 T C 22495306 0.9984 deleterious FAM8A1 6 17606162 C T 22495306 HIST1H2AE 6 26217336 G S 22495306 RPRD1A 18 33606959 C T 22495306 MTMR2 11 95580994 T C 22495306 0.2632 neutral PRCP 11 82536081 C A 22495306 0.7626 deleterious NBEAL1 2 203972384 A G 22495306 A2M 12 9225335 G A 22495306 0.7415 deleterious SLCO1C1 12 20890190 G T 22495306 0.0905 neutral MYO7B 2 128388847 G C 22495306 0.999 deleterious CSMD1 8 2965314 T C 22495306 0.004 neutral SLC17A3 6 25862544 A G 22495306 0.0475 neutral TPK1 7 144150703 C T 22495306 0.2719 neutral FBXL6 8 145580321 C T 22495306 0.1084 neutral EPHB2 1 23236941 C T 22495306 LRRIQ1 12 85626531 T K 22495306 LRP1 12 57594563 A G 22495306 0.9687 deleterious SCARB2 4 77100764 A G 22495306 0.7276 deleterious TSPYL5 8 98289514 * D:CTT 22495306 KIAA1462 10 30317090 C T 22495306 0.4902 deleterious UNK 17 73780743 C Y 22495306 CSDE1 1 115280664 G R 22495306 TECTA 11 121039453 G A 22495306 0.9648 deleterious SLC8A3 14 70517735 G A 22495306 TRIO 5 14394220 A T 22495306 0.9999 deleterious ROS1 6 117725523 T K 22495306 0.1384 neutral KIAA1432 9 5769178 A R 22495306 0.3451 neutral RFX2 19 6044241 G A 22495306 0.058 neutral TCERG1L 10 132915185 G A 22495306 DICER1 14 95574729 G A 22495306 0.8581 deleterious CD151 11 837476 G C 22495306 0.2396 neutral MARK2 11 63665704 C T 22495306 DNAH11 7 21737764 A G 22495306 0.5422 deleterious SPAG17 1 118566055 C T 22495306 0.4037 neutral USP18 22 18650710 C T 22495306 PTK7 6 43099768 G A 22495306 0.6867 deleterious AK5 1 78001663 C G 22495306 CAPN10 2 241534627 G A 22495306 0.0347 neutral SNAPC5 15 66786860 T Y 22495306 C6orf174 6 127796553 C S 22495306 IKBIP 12 99020493 T C 22495306 0.0226 neutral SLC6A1 3 11067472 C T 22495306 0.998 deleterious MPP6 7 24681464 A G 22495306 0.6044 deleterious AGK 7 141321569 G R 22495306 TUBGCP5 15 22873217 T C 22495306 0.6748 deleterious CYP1A2 15 75044182 C A 22495306 TAS2R3 7 141464367 G A 22495306 0.081 neutral ITGA11 15 68599749 G A 22495306 SLFN5 17 33586581 G T 22495306 0.9115 deleterious TUBG1 17 40765950 G A 22495306 YME1L1 10 27431317 T C 22495306 PHF3 6 64423242 C T 22495306 0.0832 neutral NDST4 4 115997959 A R 22495309 UBE3C 7 157041114 C Y 22495309 PKD1L3 16 71978060 C Y 22495309 TRIO 5 14388774 C Y 22495309 TMPRSS2 21 42842590 C Y 22495309 ACLY 17 40042385 G R 22495309 POLQ 3 121208072 T W 22495309 HNRNPF 10 43883191 T Y 22495309 DDX20 1 112308784 T K 22495309 CEP350 1 179983048 A M 22495309 VPS39 15 42461938 A R 22495309 PSMG4 6 3263960 G R 22495309 ZFYVE9 1 52704550 T K 22495309 - 20 31473369 G R 22495309 OPRL1 20 62729390 C Y 22495309 PAEP 9 138454266 G K 22495309 VWCE 11 61026394 C Y 22495309 PITPNM3 17 6371601 T Y 22495309 MLL3 7 151842339 G K 22495309 NR4A2 2 157185876 A R 22495309 HDGFRP2 19 4475539 G R 22495309 SFPQ 1 35656105 T Y 22495309 NOTCH3 19 15290235 C S 22495309 NACA 12 57106655 A R 22495309 LRP1 12 57532354 C Y 22495309 MEGF11 15 66208524 G R 22495309 AP3B2 15 83346497 C Y 22495309 ARMC9 2 232127057 C S 22495309 RUVBL1 3 127806574 A W 22495309 VKORC1L1 7 65419074 C Y 22495309 TSPAN17 5 176078840 C M 22495309 SAFB 19 5657356 T Y 22495309 CNST 1 246754937 G R 22495309 SLC17A6 11 22397637 T W 22495309 PTEN 10 89711882 C M 22495309 PION 7 77006604 T K 22495309 DET1 15 89056251 G R 22495309 CUL3 2 225376218 C M 22495309 APLF 2 68794512 G R 22495309 NAV2 11 20119143 C Y 22495309 DEPDC7 11 33053025 C Y 22495309 ISLR2 15 74425536 C Y 22495309 MST1R 3 49933686 T Y 22495309 KRT80 12 52566841 A W 22495309 SP7 12 53722742 G R 22495309 ZMYND8 20 45875004 C Y 22495309 TBR1 2 162273322 * 1D, -G 22495309 SLC40A1 2 190428392 A R 22495309 IRF2BPL 14 77494046 G S 22495309 CNOT1 16 58589410 G S 22495309 TRPM5 11 2428988 C Y 22495309 GPR146 7 1097719 A R 22495309 OPLAH 8 145114848 C Y 22495309 SGSM3 22 40802589 C Y 22495309 ZBTB41 1 197128563 A R 22495309 PTGR1 9 114341206 C Y 22495309 GPR114 16 57604401 G R 22495309 PLXDC1 17 37296037 C Y 22495309 MUC16 19 9074510 T W 22495309 LRRC8B 1 90049523 G R 22495309 TNKS 8 9567684 G complex, S & intronic 22495309 CUL5 11 107944174 G R 22495309 DNAH17 17 76420174 G R 22495309 0.1593 neutral ERV3-1 7 64452895 C Y 22495309 OR2D2 11 6913162 T Y 22495309 SYNRG 17 35946557 T K 22495309 ROCK1 18 18572849 G R 22495309 HDLBP 2 242186202 C M 22495309 DNAH5 5 13923403 * 1D, -A 22495309 FBXO10 9 37541606 C Y 22495309 ST3GAL3 1 44201955 C Y 22495309 ADCY5 3 123046605 G R 22495309 NTNG1 1 107867061 C Y 22495309 CACNA1A 19 13445217 C S 22495309 AMY2B 1 104121995 G S 22495309 INCENP 11 61907717 G S 22495309 HSPB2 11 111784275 C Y 22495309 PDCD1 2 242795103 * complex, -G & K at 242795103 22495309 KIAA0182 16 85690061 G R 22495309 SLC34A3 9 140127091 C Y 22495309 ASAH2 10 52005130 * 1I, +G 22495309 APAF1 12 99076979 T Y 22495309 CACNA1E 1 181708295 G R 22495309 KRBA1 7 149420891 C S 22495309 YTHDC2 5 112868624 C Y 22495309 BSPRY 9 116122804 G R 22495309 SESN2 1 28595739 G R 22495309 LTN1 21 30318550 C M 22495309 CACNA1D 3 53764493 C S 22495309 KATNAL2 18 44603833 G S 22495309 TTC28 22 28501597 G K 22495309 GMFG 19 39819156 A R 22495309 SLC22A9 11 63177286 C S 22495309 MDM2 12 69233432 G R 22495309 TEPP 16 58011869 G R 22495309 ZC3H12B X 64708914 G R 22495309 ARHGEF10L 1 17907117 G K 22495309 BMP1 8 22067161 G R 22495309 SCHIP1 3 159604035 C Y 22495309 FAM45A 10 120877119 G R 22495309 0.0221 neutral LIPE 19 42910539 G R 22495309 DHRS4L1 14 24513037 G R 22495309 PACS2 14 105843213 G R 22495309 SCYL1 11 65304530 G R 22495309 RIMS2 8 104778570 G R 22495309 SRPR 11 126134982 C Y 22495309 0.8295 deleterious CDH5 16 66434715 C Y 22495309 COL25A1 4 109790273 * 1D, -T 22495309 ADNP 20 49510027 * 2D, -TT 22495309 PLEKHA8 7 30085846 C M 22495309 NUP133 1 229596508 T Y 22495309 NLGN1 3 173999004 C Y 22495309 MCAM 11 119185283 C Y 22495309 CDON 11 125891290 A R 22495309 CARKD 13 111290774 C Y 22495309 UBR3 2 170732427 * complex, -AAA,+C 22495309 TTC39A 1 51768226 G R 22495309 EIF3G 19 10229773 G R 22495309 GRIN3B 19 1004871 C Y 22495309 DDR2 1 162737120 A R 22495309 C15orf62 15 41063220 A W 22495309 ABCA2 9 139906388 C Y 22495309 SH2D3C 9 130513455 C Y 22495309 RNF123 3 49743440 A R 22495309 SRBD1 2 45789855 G R 22495309 TIPIN 15 66629505 T Y 22495309 SRRM2 16 2815062 C Y 22495309 PNPLA7 9 140357232 T K 22495309 STARD9 15 42979758 T K 22495309 EIF4G1 3 184042810 A M 22495309 UIMC1 5 176409516 C Y 22495309 SLC7A7 14 23243580 G R 22495309 STIL 1 47746823 A complex, R & Y at 47746810 22495309 PHF19 9 123636848 C Y 22495309 PSEN1 14 73685855 C Y 22495309 STK36 2 219537583 G R 22495309 TBL1XR1 3 176765107 A R 22495309 PBRM1 3 52643512 T Y 22495309 HLTF 3 148773129 T W 22495309 MYBBP1A 17 4444853 G K 22495309 MBD5 2 149225965 * 2D, -TC 22495309 TCF4 18 52928697 C Y 22495309 TSR2 X 54467212 T K 22495309 RYR1 19 39038884 A R 22495309 DGCR8 22 20074137 C Y 22495309 GLMN 1 92729282 C Y 22495309 PAQR4 16 3021892 C Y 22495309 COL12A1 6 75875492 C Y 22495309 WNT5A 3 55504413 A R 22495309 ITGA2 5 52340901 C Y 22495309 LAMB2 3 49166218 C S 22495309 CNOT3 19 54656675 * 2D, -TG 22495309 C3orf38 3 88205377 A R 22495309 USP15 12 62775296 * 4D, -TGAG 22495309 NTNG1 1 107691283 A R 22495309 FRYL 4 48514594 T K 22495309 C9orf30 9 103213020 A R 22495309 NAA40 11 63713339 A M 22495309 SETD2 3 47098932 * 1D, -T 22495309 DDI2 1 15956938 T K 22495309 L1TD1 1 62672433 T Y 22495309 METTL20 12 31820918 G R 22495309 KIAA0319 6 24564464 C Y 22495309 TSC2 16 2136269 C Y 22495309 GAD1 2 171704248 G R 22495309 CD72 9 35611807 C Y 22495309 TAS2R10 12 10978472 T W 22495309 CHD3 17 7812028 C Y 22495309 TMC4 19 54672377 A R 22495309 0.5352 deleterious ZNF644 1 91405302 C Y 22495309 RFX8 2 102014147 C Y 22495309 CDHR5 11 618678 T K 22495309 DNAJB9 7 108213622 T K 22495309 INPP5B 1 38411441 C Y 22495309 CTNNB1 3 41275757 C Y 22495309 ARNT 1 150789281 C M 22495309 TATDN2 3 10302080 C S 22495309 EHD2 19 48221860 C Y 22495309 PRKCA 17 64684446 G R 22495309 IQGAP2 5 75902128 C Y 22495309 ETFB 19 51848515 C M 22495309 CHD8 14 21861376 * 2D, -CT 22495309 OR10Z1 1 158576351 C M 22495309 MYO7B 2 128381815 C Y 22495309 SETBP1 18 42532021 * complex, +GG&-C 22495309 KALRN 3 124281800 C Y 22495309 HTATIP2 11 20404729 C Y 22495309 ZBED4 22 50279386 C Y 22495309 FAF2 5 175933795 G R 22495309 SLC9A1 1 27440599 C S 22495309 PCNX 14 71555929 A R 22495309 RPS6KA3 X 20193403 G S 22495309 OR11L1 1 248005027 G S 22495309 UGGT1 2 128938561 G R 22495309 DUS1L 17 80020802 G R 22495309 RGMA 15 93588446 C Y 22495309 POLRMT 19 630058 G R 22495309 ACP2 11 47270271 C Y 22495309 ZNF420 19 37618120 T Y 22495309 KIAA0100 17 26961045 G R 22495309 GNA11 19 3118953 C M 22495309 DPP4 2 162865169 T Y 22495309 GNL3L X 54586960 C Y 22495309 CNOT4 7 135122938 C Y 22495309 C9orf68 9 4605416 T W 22495309 BRSK2 11 1466811 * 3D, -AGA 22495309 ARID1B 6 157527664 * 4D, -TGTT 22495309 NOLC1 10 103917282 T K 22495309 MKI67 10 129903200 A R 22495309 SLCO1C1 12 20864352 A R 22495309 TTN 2 179436520 C Y 22495309 CISH 3 50645313 T W 22495309 ZBED2 3 111312622 G R 22495309 TSNARE1 8 143356191 G R 22495309 RGS22 8 100990260 C M 22495309 H2AFV 7 44875212 G R 22495309 CDC42BPB 14 103434646 G R 22495309 PTPRK 6 128326372 C Y 22495309 GPS1 17 80014816 G R 22495309 0.9322 deleterious TREH 11 118532369 C M 22495309 PGD 1 10473286 C Y 22495309 CACNA2D2 3 50425026 G R 22495309 CHD7 8 61735090 G R 22495309 CELA1 12 51723570 A R 22495309 MYH10 17 8457299 T Y 22495309 POLR2M 15 58001002 * 3D, -GAA 22495309 PCDHB4 5 140503243 G S 22495309 SBF1 22 50899030 T Y 22495309 DBR1 3 137885960 T Y 22495309 GJA10 6 90605047 A R 22495309 PDIA6 2 10931993 T Y 22495309 ITGB3 17 45368327 G R 22495309 MAP4 3 47969769 C M 22495309 PTGES 9 132501907 C Y 22495309 LRRK1 15 101569435 C Y 22495309 CUBN 10 17127755 G R 22495309 CHD8 14 21871178 G R 22495309 TRAPPC8 18 29444743 T Y 22495309 MSH6 2 48026852 G R 22495309 DYRK1A 21 38865466 G R 22495309 FBXW9 19 12800074 C Y 22495309 BRWD1 21 40568453 * 1D, -T 22495309 CACHD1 1 65139072 T G 22495311 0.0265 neutral CCDC18 1 93667486 G A 22495311 0.8601 deleterious TMEM56 1 95616924 A G 22495311 VAV3 1 108138879 G C 22495311 0.0623 neutral STXBP3 1 109321932 A G 22495311 0.9404 deleterious TTF2 1 117632812 C A 22495311 0.7743 deleterious APH1A 1 150238957 G A 22495311 POGZ 1 151379469 G GGTAC 22495311 SPRR2D 1 153012685 T A 22495311 CD247 1 167410000 T C 22495311 C1orf125 1 179337957 A G 22495311 TDRD5 1 179609178 G A 22495311 CACNA1E 1 181721285 C T 22495311 NR5A2 1 200017391 C T 22495311 PPP1R15B 1 204380092 G A 22495311 NFASC 1 204978698 C T 22495311 USH2A 1 216363573 A G 22495311 0.4483 neutral SPAST 2 32361662 CT C 22495311 ANTXR1 2 69409650 C T 22495311 0.9592 deleterious ZNF638 2 71635358 C G 22495311 0.0139 neutral CIAO1 2 96936917 C G 22495311 0.0375 neutral FBLN7 2 112922678 G A 22495311 TBR1 2 162275553 A C 22495311 0.9879 deleterious DNAH7 2 196640603 A C 22495311 MOBKL3 2 198388394 C T 22495311 CYP20A1 2 204161598 A G 22495311 coding intron of 2 207621863 AG 22495311 ABCA12 2 215846997 C G 22495311 0.3258 neutral FN1 2 216259404 C T 22495311 0.4875 neutral PLCD4 2 219483415 C T 22495311 0.6729 deleterious OBSL1 2 220422963 C T 22495311 0.9883 deleterious SPP2 2 234969088 TC T 22495311 ASB1 2 239344638 C A 22495311 0.4041 deleterious SETD5 3 9486949 G A 22495311 0.0772 neutral SMARCC1 3 47702879 T C 22495311 0.968 deleterious PLXNB1 3 48455355 A 22495311 DAG1 3 49570115 C T 22495311 0.1871 neutral NISCH 3 52492846 C G 22495311 0.4588 neutral CADPS 3 62543117 C T 22495311 ST3GAL6 3 98510684 G C 22495311 MCM2 3 127327353 C T 22495311 MUC4 3 195505250 G A 22495311 GAK 4 898481 G A 22495311 0.2725 neutral FBXL5 4 15640246 T G 22495311 REST 4 57798002 C G 22495311 0.2049 neutral GNRHR 4 68619768 G A 22495311 0.9626 deleterious UGT2B10 4 69681849 A G 22495311 0.479 deleterious GPRIN3 4 90170534 C G 22495311 0.0573 neutral METTL14 4 119626841 A G 22495311 0.7268 deleterious INTU 4 128595288 C T 22495311 FAT1 4 187524608 T C 22495311 0.1151 neutral FAT1 4 187538324 T G 22495311 0.203 neutral SLC6A3 5 1414895 G A 22495311 0.9992 deleterious MTMR12 5 32263299 C T 22495311 DAB2 5 39376856 G C 22495311 0.0563 neutral GPX8 5 54456842 G A 22495311 MEF2C 5 88100432 T C 22495311 0.9929 deleterious CHD1 5 98216794 G C 22495311 0.9805 deleterious FNIP1 5 131013499 T C 22495311 PCDHB16 5 140563351 A G 22495311 0.281 neutral PWWP2A 5 159520099 G A 22495311 0.92 deleterious ZNF311 6 28963322 C T 22495311 0.148 neutral KIAA1949 6 30652620 G C 22495311 LY6G6F 6 31675849 G A 22495311 0.0181 neutral ANKS1A 6 34985466 C T 22495311 0.0531 neutral XPO5 6 43492367 T C 22495311 0.7446 deleterious ZNF451 6 57017096 C T 22495311 0.6155 deleterious TBX18 6 85470056 C G 22495311 0.5665 deleterious ZNF292 6 87925717 C T 22495311 IQCE 7 2629665 A G 22495311 0.0341 neutral MACC1 7 20199071 T C 22495311 0.6851 deleterious CDCA7L 7 21947980 G A 22495311 0.0385 neutral INMT 7 30791907 G A 22495311 ABCA13 7 48390312 A G 22495311 0.5617 deleterious ADAM22 7 87760687 G A 22495311 0.5125 deleterious ZKSCAN5 7 99123456 A G 22495311 0.0017 neutral C7orf43 7 99755468 T G 22495311 0.3964 neutral RELN 7 103322603 G A 22495311 KIAA1549 7 138552798 G A 22495311 0.4241 neutral MYOM2 8 2027642 C T 22495311 MCPH1 8 6500546 T A 22495311 KIAA1967 8 22476678 G A 22495311 0.1793 neutral SNTG1 8 51705253 T A 22495311 0.097 neutral SCRIB 8 144891120 G A 22495311 0.2495 neutral PLEC 8 144995364 G A 22495311 GLDC 9 6534708 G A 22495311 MPDZ 9 13247770 C T 22495311 0.5125 deleterious TOPORS 9 32542613 G A 22495311 0.0011 neutral COL15A1 9 101832099 A G 22495311 STXBP1 9 130444788 C T 22495311 0.9987 deleterious SVIL 10 29769625 C A 22495311 JMJD1C 10 64967942 T C 22495311 0.0479 neutral KCNMA1 10 78869948 A C 22495311 0.9289 deleterious KCNMA1 10 78943225 C T 22495311 MMRN2 10 88703271 C T 22495311 0.2049 neutral MYOF 10 95079735 G C 22495311 0.0178 neutral CCNJ 10 97816903 G A 22495311 C10orf90 10 128118361 A G 22495311 NUP98 11 3721958 G A 22495311 DENND5A 11 9163520 C T 22495311 0.9726 deleterious MICALCL 11 12371396 C G 22495311 0.4478 neutral LGR4 11 27397988 A 22495311 SLC1A2 11 35395749 TGTGACTTGCTGGCTT 22495311 OR8H1 11 56058115 C T 22495311 0.0085 neutral APLNR 11 57003801 T C 22495311 DPP3 11 66261048 G A 22495311 0.792 deleterious MYO7A 11 76891512 C T 22495311 CCDC90B 11 82989819 T C 22495311 0.0566 neutral PIWIL4 11 94340642 A T 22495311 0.9424 deleterious APOC3 11 116701581 G A 22495311 0.027 neutral MLL 11 118344818 T A 22495311 0.1040 neutral KIRREL3 11 126333180 C T 22495311 0.8227 deleterious MANSC1 12 12483385 G A 22495311 0.0247 neutral C12orf41 12 49062942 G A 22495311 TUBA1A 12 49579227 G A 22495311 0.9177 deleterious ITGA5 12 54793722 C A 22495311 SMARCC2 12 56566368 C A 22495311 SLC39A5 12 56629024 C T 22495311 0.4554 neutral STAT2 12 56744934 G A 22495311 0.1016 neutral SRGAP1 12 64519821 C T 22495311 ZFC3H1 12 72004328 T C 22495311 WDR66 12 122359408 G A 22495311 0.002 neutral DENR 12 123246737 G A 22495311 0.991 deleterious ZMYM2 13 20641159 GTAA 22495311 CDX2 13 28542803 T C 22495311 0.1907 neutral BRCA2 13 32915264 G A 22495311 0.0395 neutral BRCA2 13 32929306 G A 22495311 0.4272 neutral SUCLA2 13 48575333 G A 22495311 MYCBP2 13 77700568 A G 22495311 0.0089 neutral PRPF39 14 45571806 G A 22495311 SYNE2 14 64532269 G A 22495311 DCAF4 14 73420965 G C 22495311 0.0126 neutral SEL1L 14 81952041 T C 22495311 AHNAK2 14 105411605 C G 22495311 0.013 neutral RTF1 15 41745214 A C 22495311 0.4068 neutral FAM63B 15 59064294 A G 22495311 0.987 deleterious PIAS1 15 68378807 G A 22495311 0.9931 deleterious ARNT2 15 80806697 A G 22495311 CHD2 15 93518170 A G 22495311 0.9766 deleterious TRAF7 16 2226080 C T 22495311 0.6017 deleterious MKL2 16 14334157 C T 22495311 0.1611 neutral ABCC12 16 48175156 C T 22495311 ZDHHC1 16 67432775 G A 22495311 RTN4RL1 17 1840824 C T 22495311 0.6771 deleterious POLR2A 17 7416351 T A 22495311 0.881 deleterious ALOX12B 17 7983087 C T 22495311 PER1 17 8044457 T C 22495311 0.4499 neutral SLC6A4 17 28544289 C G 22495311 KRTAP9-3 17 39389177 A G 22495311 0.0902 neutral AOC3 17 41004302 A G 22495311 DUSP3 17 41847180 G A 22495311 0.8976 deleterious CLTC 17 57758401 T C 22495311 TBX4 17 59560616 C T 22495311 SMCHD1 18 2743776 A G 22495311 0.0848 neutral MYO5B 18 47506898 G A 22495311 FGF22 19 643270 G A 22495311 0.8926 deleterious TCF3 19 1619177 null T 22495311 C3 19 6678390 G C 22495311 0.8364 deleterious ELL 19 18576690 C T 22495311 UPF1 19 18976921 G A 22495311 ZNF155 19 44500603 C T 22495311 ZNF813 19 53994750 A C 22495311 0.0007 neutral CST9 20 23584346 A G 22495311 0.3312 neutral DUSP15 20 30450489 G A 22495311 0.8054 deleterious TOP1 20 39742794 G A 22495311 0.7825 deleterious C20orf111 20 42825855 GA 22495311 KCNS1 20 43723695 C T 22495311 0.7426 deleterious ITGB2 21 46311861 C T 22495311 CECR1 22 17662817 C T 22495311 0.0054 neutral EWSR1 22 29693821 A G 22495311 CYTH4 22 37693679 C T 22495311 SBF1 22 50898487 C T 22495311 0.9831 deleterious ELK1 X 47497356 C T 22495311 0.1279 neutral COLEC12 18 321720 C A 22542183 0.9995 deleterious CR594687 5 75469979 G T 22542183 PM20D1 1 205797834 A G 22542183 0.9818 deleterious ITGA3 17 48145447 C T 22542183 ZNF860 3 32030783 T C 22542183 0.0136 neutral PLD5 1 242383342 T C 22542183 0.025 neutral BEST3 12 70087547 G T 22542183 0.9519 deleterious NCKAP1 2 183791570 C A 22542183 GPR113 2 26536713 C T 22542183 PIK3R2 19 18273859 G A 22542183 0.9234 deleterious AK056332 2 228112254 A G 22542183 TTN 2 179447820 G T 22542183 0.0112 neutral PAFAH1B2 11 117034592 C G 22542183 0.9644 deleterious ACRBP 12 6752713 C T 22542183 0.4983 neutral TRIP12 2 230701696 G A 22542183 CPA4 7 129938587 G T 22542183 0.4554 neutral NFIA 1 61553905 C T 22542183 CLCN7 16 1510886 G T 22542183 0.0516 neutral PLEKHA8 7 30101537 A G 22542183 0.4576 neutral SNX5 20 17928186 G A 22542183 0.0961 neutral TMEM41A 3 185209431 A G 22542183 0.2869 neutral AGAP2 12 58131129 G C 22542183 0.016 neutral POLN 4 2129967 G A 22542183 FAM91A1 8 124787443 C T 22542183 LRRC31 3 169579555 T A 22542183 0.151 neutral UNC80 2 210745771 C T 22542183 CYP4F12 19 15791068 A C 22542183 0.156 neutral C19orf28 19 3546431 G A 22542183 NRXN1 2 50724605 A T 22542183 ANK2 4 114232545 C T 22542183 KIAA0232 4 6843914 C T 22542183 HMGXB3 5 149390017 C T 22542183 0.0226 neutral NR3C2 4 149073677 G T 22542183 ANO5 11 22276997 C T 22542183 VPS13B 8 100168821 G A 22542183 FAM129B 9 130270790 C T 22542183 0.4959 deleterious ATP1B1 1 169096506 C T 22542183 TNRC6C 17 76067246 G A 22542183 LZTR1 22 21350080 G T 22542183 0.9539 deleterious LRRC40 1 70614246 T A 22542183 0.7601 deleterious WDFY3 4 85719152 T A 22542183 MAPK13 6 36106748 C T 22542183 0.9189 deleterious RAD21L1 20 1210539 C T 22542183 TOP3B 22 22312975 A G 22542183 0.8773 deleterious TEKT1 17 6716262 G T 22542183 0.3407 neutral C19orf15 19 38855701 G A 22542183 NUAK1 12 106461269 G A 22542183 ABCA1 9 107589209 G T 22542183 WDR55 5 140048282 C T 22542183 0.9866 deleterious C12orf51 12 112654745 G C 22542183 ADCY5 3 123049782 C Y 23160955 ADCY5 3 123046605 G R 23160955 ADNP 20 49510027 * -TT/* 23160955 ADNP 20 49509094 * +T/* 23160955 ARID1B 6 157510805 * +C/* 23160955 ARID1B 6 157527664 * -TGTT/* 23160955 CHD8 14 21899618 G S 23160955 CHD8 14 21878133 * +T/* 23160955 CHD8 14 21871373 T Y 23160955 CHD8 14 21871178 G R 23160955 CHD8 14 21870169 G R 23160955 CHD8 14 21861643 * -CTTC/* 23160955 CHD8 14 21861376 * -CT/* 23160955 CHD8 14 21859175 * +T/* 23160955 CHD8 14 21854022 * -GGT/* 23160955 CTNNB1 3 41275346 G R 23160955 CTNNB1 3 41275757 C Y 23160955 DYRK1A 21 38845116 * -AT/* 23160955 DYRK1A 21 38865466 G R 23160955 DYRK1A 21 38877833 * -C/* 23160955 GRIN2B 12 14019043 * +G/* 23160955 GRIN2B 12 13768560 C Y 23160955 0.9369 deleterious GRIN2B 12 13764762 C Y 23160955 GRIN2B 12 13722953 T Y 23160955 LAMC3 9 133914290 A R 23160955 0.5885 deleterious LAMC3 9 133952690 A R 23160955 NTNG1 1 107691283 A R 23160955 NTNG1 1 107867061 C Y 23160955 PTEN 10 89692908 C Y 23160955 0.9811 deleterious PTEN 10 89692920 * +A/* 23160955 PTEN 10 89711882 C M 23160955 SBF1 22 50901032 G R 23160955 SBF1 22 50899030 T Y 23160955 SCN1A 2 166848071 G R 23160955 SCN1A 2 166848006 T Y 23160955 SETD2 3 47166005 T W 23160955 SETD2 3 47098932 * -T/* 23160955 SGSM3 22 40802589 C Y 23160955 SGSM3 22 40804965 A R 23160955 TBL1XR1 3 176765107 A R 23160955 TBL1XR1 3 176752047 * -A/* 23160955 TBR1 2 162273322 * -C/* 23160955 TBR1 2 162273603 A R 23160955 0.9691 deleterious TBR1 2 162275481 * +C/* 23160955 UBE3C 7 157041114 C Y 23160955 UBE3C 7 157049644 T K 23160955 CLCNKB 1 16376358 C G 23849776 0.2456 neutral MOV10 1 113235478 G A 23849776 0.105 neutral CCDC19 1 159846398 C T 23849776 NAV1 1 201687561 C A 23849776 0.8286 deleterious KIAA1217 10 24802273 T C 23849776 0.5963 deleterious SFTPD 10 81702258 G A 23849776 0.6319 deleterious SLK 10 105768025 C T 23849776 0.935 deleterious CAPRIN1 11 34107924 C T 23849776 ZFPL1 11 64852255 G A 23849776 0.3114 neutral FAT3 11 92600180 G A 23849776 0.5186 deleterious TBC1D30 12 65269243 C T 23849776 0.002 neutral HCAR1 12 123213933 G A 23849776 KIAA0284 14 105354151 G A 23849776 COPS2 15 49426143 G A 23849776 0.998 deleterious INPP5K 17 1411432 C T 23849776 0.0123 neutral DCAKD 17 43111636 G T 23849776 DNMT3A 2 25466800 G A 23849776 0.3113 neutral ARID5A 2 97215971 G T 23849776 0.79 deleterious ARL6IP6 2 153575211 C G 23849776 0.0134 neutral SNX5 20 17923824 T C 23849776 0.5007 deleterious MICAL3 22 18387403 T C 23849776 0.9836 deleterious MAP4 3 47957453 T C 23849776 0.0103 neutral COL7A1 3 48621941 G A 23849776 0.329 neutral IMPDH2 3 49064457 C G 23849776 0.1613 neutral STXBP5L 3 120628487 G A 23849776 0.0015 neutral AHRR 5 422895 C G 23849776 0.3953 deleterious ITK 5 156679654 G A 23849776 0.4986 deleterious SLIT3 5 168175351 C A 23849776 SYNE1 6 152771947 G A 23849776 0.3053 neutral VIP 6 153075412 T A 23849776 LRRC4 7 127670456 G C 23849776 0.9764 deleterious LRGUK 7 133842813 A G 23849776 SOX7 8 10583692 C T 23849776 DCAF13 8 104439424 T G 23849776 0.005 neutral LAMC3 9 133942350 G A 23849776 0.672 deleterious MXRA5 X 3248358 T C 23849776 0.8912 deleterious KAL1 X 8522080 G A 23849776 WWC3 X 10104728 G A 23849776 0.9939 deleterious NR0B1 X 30327222 C A 23849776 0.2428 neutral SCN2A 2 166164448 G A 24650168 TLE1 9 84199163 C T 24650168 0.0223 neutral BUB1 2 111398623 T C 24650168 C10orf68 10 32856654 T A 24650168 KCND2 7 120373051 G A 24501278 0.998 deleterious BICC1 10 60549454 A G 24501278 0.0415 neutral C8orf31 8 144126055 TC T 25284784 PARP6 15 72535063 CTTCAT C 25284784 PTGER3 1 71439935 C CG 25284784 MORC3 21 37744772 CAG C 25284784 CDC23 5 137534408 CTG C 25284784 DVL3 3 183887912 G GT 25284784 TBR1 2 162275481 A AC 25284784 PHACTR2 6 144033170 GCTT G 25284784 DENND3 8 142200355 G GGT 25284784 HARS2 5 140076709 CG C 25284784 MSL2 3 135871025 TCAGA T 25284784 BUB3 10 124923291 GC G 25284784 MLL5 7 104702706 AC A 25284784 CHD2 15 93524060 TAAAG T 25284784 ANKRD11 16 89350771 CTTTG C 25284784 SNW1 14 78227470 TCTTCTTCCG T 25284784 CD109 6 74440138 CTCTAATAGT C 25284784 RIMS1 6 73102488 C CA 25284784 KCNMB4 12 70824293 CATG C 25284784 PHF3 6 64413433 CCG C 25284784 KCNQ2 20 62070073 CCTGCAATTCATCAGGGTCAGGTCACA C 25284784 MED13 17 60060310 AGGAGTCCTT A 25284784 ZNF772 19 57986982 G GGGCA 25284784 SUMF2 7 56144465 CT C 25284784 SPAG9 17 49072429 GATCTA G 25284784 HIVEP3 1 42048715 C CG 25284784 PRKAA1 5 40775591 C CTGA 25284784 TNRC6B 22 40661586 AAGAG A 25284784 PLCG1 20 39791805 G GT 25284784 DYRK1A 21 38845116 CAT C 25284784 ELMO1 7 37355576 C CA 25284784 NF1 17 29676099 TCTTA T 25284784 SSH2 17 27982695 GAGA G 25284784 PRMT5 14 23392075 TG T 25284784 FAM83G 17 18874685 C CGGT 25284784 STAM 10 17738824 CT C 25284784 CTRC 1 15765077 TG T 25284784 RAF1 3 12628988 GATATCCCCTGGCACC G 25284784 ELAVL3 19 11576905 GGGGC G 25284784 GALNTL4 11 11314679 TCATCCACG&TG T&T 25284784 MEGF6 1 3519049 AC A 25284784 AMZ1 7 2748240 TGAA T 25284784 NOC2L 1 881802 C T 25363760 0.7788 deleterious KLHL17 1 897739 T C 25363760 0.9882 deleterious ATAD3B 1 1423250 C T 25363760 0.0078 neutral TMEM52 1 1849510 G C 25363760 0.9216 deleterious SKI 1 2234766 C T 25363760 CHD5 1 6191718 G A 25363760 0.9601 deleterious ACOT7 1 6420658 T C 25363760 0.0017 neutral ZBTB48 1 6642301 G A 25363760 0.5478 deleterious RERE 1 8418823 C T 25363760 0.8377 deleterious VPS13D 1 12336770 C T 25363760 0.9913 deleterious AADACL4 1 12726725 C G 25363760 KAZN 1 15430600 G A 25363760 0.8794 deleterious TMEM51 1 15545879 C T 25363760 FBLIM1 1 16096936 C T 25363760 0.3235 neutral SPEN 1 16235920 A C 25363760 0.9211 deleterious CLCNKB 1 16375706 G A 25363760 0.4111 neutral CROCC 1 17250836 A G 25363760 PADI1 1 17531782 G A 25363760 0.4716 deleterious PADI3 1 17596738 T G 25363760 0.0927 neutral UBR4 1 19446711 G A 25363760 0.5125 deleterious UBXN10 1 20517220 G A 25363760 0.0251 neutral RAP1GAP 1 21929359 C T 25363760 HSPG2 1 22174444 C T 25363760 EPHB2 1 23233357 C T 25363760 HNRNPR 1 23637156 G A 25363760 0.0488 neutral IL28RA 1 24507257 T C 25363760 PDIK1L 1 26449034 A G 25363760 0.5355 deleterious ARID1A 1 27088806 A T 25363760 EPB41 1 29379632 G A 25363760 SDC3 1 31346198 C T 25363760 0.7468 deleterious PUM1 1 31437728 G A 25363760 0.9109 deleterious SNRNP40 1 31754296 C A 25363760 SERINC2 1 31905923 C G 25363760 0.0745 neutral PTP4A2 1 32374546 C T 25363760 TMEM39B 1 32557520 A G 25363760 0.9962 deleterious KIAA1522 1 33236926 C G 25363760 0.1193 neutral NCDN 1 36026645 C T 25363760 0.0399 neutral EIF2C4 1 36282630 G T 25363760 EIF2C4 1 36306838 G T 25363760 EIF2C3 1 36474610 G A 25363760 GUCA2A 1 42629116 G A 25363760 0.2221 neutral FOXJ3 1 42647625 G A 25363760 CCDC24 1 44458012 C T 25363760 KLF17 1 44595425 C G 25363760 0.2916 neutral DMAP1 1 44680521 G A 25363760 0.7376 deleterious MAST2 1 46500523 G A 25363760 MAST2 1 46501219 A G 25363760 DMBX1 1 46977822 C A 25363760 0.4772 deleterious TTC39A 1 51771704 T C 25363760 0.0234 neutral OSBPL9 1 52253139 G C 25363760 0.0099 neutral ACOT11 1 55060359 A G 25363760 0.2074 neutral HEATR8 1 55161082 C T 25363760 MYSM1 1 59147575 T C 25363760 0.1887 neutral FOXD3 1 63789333 A T 25363760 0.9947 deleterious CACHD1 1 65139072 T G 25363760 0.0265 neutral SGIP1 1 67154953 G A 25363760 0.2047 neutral SRSF11 1 70703186 GA G 25363760 MSH4 1 76282194 CA C 25363760 ASB17 1 76397917 G T 25363760 ZNHIT6 1 86173504 T A 25363760 0.0927 neutral CLCA4 1 87043692 G A 25363760 0.2126 neutral GBP6 1 89846032 G A 25363760 0.2803 neutral CDC7 1 91973842 G T 25363760 0.1603 neutral BTBD8 1 92546143 G A 25363760 GLMN 1 92737032 T C 25363760 0.1096 neutral MTF2 1 93602372 G A 25363760 0.8067 deleterious CCDC18 1 93667486 G A 25363760 0.8601 deleterious ABCA4 1 94502713 A T 25363760 ABCD3 1 94953137 A G 25363760 0.9116 deleterious TMEM56 1 95616924 A G 25363760 PTBP2 1 97272493 G A 25363760 0.1016 neutral VAV3 1 108138879 G C 25363760 0.0623 neutral STXBP3 1 109315441 G A 25363760 0.715 deleterious STXBP3 1 109321932 A G 25363760 0.9404 deleterious CSF1 1 110456998 C T 25363760 0.159 neutral FAM40A 1 110584430 GC G 25363760 ST7L 1 113084629 T C 25363760 0.0379 neutral DENND2C 1 115153709 C T 25363760 0.0642 neutral AMPD1 1 115217373 C CT 25363760 CSDE1 1 115276416 G T 25363760 ATP1A1 1 116943617 G A 25363760 0.7546 deleterious TTF2 1 117632812 C A 25363760 0.7743 deleterious HAO2 1 119927556 C T 25363760 HSD3B2 1 119964751 G A 25363760 NBPF14 1 148017617 ATCCCAGGAC A 25363760 APH1A 1 150238957 G A 25363760 APH1A 1 150240177 C A 25363760 0.0676 neutral SETDB1 1 150933526 T C 25363760 SEMA6C 1 151112158 C T 25363760 0.08 neutral PSMB4 1 151372965 C A 25363760 0.9856 deleterious POGZ 1 151379469 G GGTAC 25363760 RORC 1 151783852 C T 25363760 RORC 1 151787862 C G 25363760 0.9216 deleterious FLG2 1 152327810 C T 25363760 0.0016 neutral S100A1 1 153604222 G A 25363760 0.3204 neutral ILF2 1 153637720 G A 25363760 ATP8B2 1 154307007 C T 25363760 ATP8B2 1 154317610 A G 25363760 0.9271 deleterious RUSC1 1 155296911 C A 25363760 0.0448 neutral ASH1L 1 155448915 TTA T 25363760 ARHGEF2 1 155932442 G A 25363760 0.3328 neutral LMNA 1 156105767 C T 25363760 MEF2D 1 156452417 G A 25363760 0.9819 deleterious ARHGEF11 1 156928572 T C 25363760 CD1A 1 158226779 G A 25363760 0.009 neutral PYHIN1 1 158913694 C T 25363760 COPA 1 160281685 T C 25363760 0.318 neutral NCSTN 1 160327962 C T 25363760 USP21 1 161130734 C T 25363760 0.1753 neutral OLFML2B 1 161989809 G A 25363760 0.0776 neutral PBX1 1 164532514 GT G 25363760 PBX1 1 164790805 C T 25363760 0.7503 deleterious CD247 1 167410000 T C 25363760 GORAB 1 170508470 C T 25363760 0.3655 neutral MYOC 1 171621313 G A 25363760 SLC9A11 1 173493166 A G 25363760 RC3H1 1 173947626 C T 25363760 0.8886 deleterious SOAT1 1 179310419 T G 25363760 0.6798 deleterious TDRD5 1 179609178 G A 25363760 CEP350 1 179985050 A G 25363760 0.828 deleterious CACNA1E 1 181721285 C T 25363760 ZNF648 1 182026889 C T 25363760 0.0771 neutral HMCN1 1 185985113 T C 25363760 PRG4 1 186276795 C T 25363760 RGS1 1 192545954 T C 25363760 0.9964 deleterious RGS2 1 192779294 A T 25363760 CDC73 1 193111163 G GAC 25363760 KCNT2 1 196395019 C G 25363760 0.9714 deleterious CRB1 1 197390429 G A 25363760 0.0961 neutral NR5A2 1 200017391 C T 25363760 CACNA1S 1 201009483 G C 25363760 0.4875 neutral KDM5B 1 202724403 G GC 25363760 KDM5B 1 202742307 C G 25363760 0.9843 deleterious KLHL12 1 202863873 C G 25363760 0.9486 deleterious ZC3H11A 1 203816590 A T 25363760 NFASC 1 204978698 C T 25363760 NFASC 1 204978698 C T 25363760 RBBP5 1 205072989 C T 25363760 0.9969 deleterious C4BPB 1 207265132 A G 25363760 0.0307 neutral DIEXF 1 210016834 G A 25363760 0.6653 deleterious NEK2 1 211843642 G A 25363760 0.9447 deleterious FLVCR1 1 213061871 G A 25363760 0.9997 deleterious PTPN14 1 214557735 G A 25363760 0.9732 deleterious KCTD3 1 215781447 G A 25363760 USH2A 1 216363573 A G 25363760 0.4483 neutral BPNT1 1 220233081 C A 25363760 0.7625 deleterious MARK1 1 220835211 G A 25363760 MIA3 1 222805584 A G 25363760 0.0044 neutral MIA3 1 222835428 G A 25363760 0.1112 neutral CDC42BPA 1 227307548 T G 25363760 0.7997 deleterious RYR2 1 237870440 C A 25363760 0.6129 deleterious CHRM3 1 240072255 A G 25363760 0.2073 neutral CHML 1 241798420 T A 25363760 0.8153 deleterious EXO1 1 242015681 T G 25363760 ZNF238 1 244218501 C T 25363760 ADSS 1 244583599 C A 25363760 PPPDE1 1 244816617 T TG 25363760 PGBD2 1 249211378 A T 25363760 0.7939 deleterious SH3YL1 2 234212 C T 25363760 0.995 deleterious MYT1L 2 1893073 G A 25363760 MYT1L 2 1921023 G C 25363760 0.6197 deleterious MYT1L 2 1926950 G T 25363760 ASAP2 2 9467956 A G 25363760 0.7253 deleterious NOL10 2 10747348 A C 25363760 0.003 neutral GREB1 2 11765413 G A 25363760 NTSR2 2 11798722 G A 25363760 KCNS3 2 18113537 TG T 25363760 WDR35 2 20138107 C G 25363760 0.5125 deleterious APOB 2 21229188 T G 25363760 0.5468 deleterious ADCY3 2 25042880 A G 25363760 0.6341 deleterious ADCY3 2 25057739 C T 25363760 0.3659 neutral ADCY3 2 25061366 G A 25363760 0.3659 neutral DNAJC27 2 25180710 T G 25363760 0.743 deleterious DNMT3A 2 25463289 T C 25363760 0.8708 deleterious KIF3C 2 26203250 T C 25363760 0.7071 deleterious C2orf70 2 26798966 C T 25363760 0.7657 deleterious DPYSL5 2 27164818 G A 25363760 0.1869 neutral SPAST 2 32361662 CT C 25363760 BIRC6 2 32640862 C G 25363760 0.4611 neutral BIRC6 2 32656133 C T 25363760 HEATR5B 2 37299319 G A 25363760 DHX57 2 39053113 G A 25363760 DHX57 2 39065068 T C 25363760 0.2942 neutral LRPPRC 2 44184566 G A 25363760 0.171 neutral SIX2 2 45235850 T A 25363760 SRBD1 2 45778322 T A 25363760 0.5763 deleterious MCFD2 2 47136241 C T 25363760 0.051 neutral MSH2 2 47672716 T A 25363760 0.4028 neutral KLRAQ1 2 48692688 G A 25363760 NRXN1 2 50318536 C T 25363760 0.0458 neutral NRXN1 2 50850511 T G 25363760 0.8128 deleterious PSME4 2 54114533 G A 25363760 0.036 neutral SMEK2 2 55808728 G C 25363760 BCL11A 2 60688721 GA G 25363760 PAPOLG 2 61014164 C A 25363760 0.7203 deleterious OTX1 2 63283025 C G 25363760 VPS54 2 64120568 C A 25363760 0.0274 neutral SLC1A4 2 65245299 G A 25363760 0.9971 deleterious SPRED2 2 65561787 G A 25363760 APLF 2 68794483 C A 25363760 0.5059 deleterious ANTXR1 2 69409650 C T 25363760 0.9592 deleterious PCYOX1 2 70502099 G A 25363760 0.8623 deleterious CD207 2 71062628 C T 25363760 0.1061 neutral ZNF638 2 71635358 C G 25363760 0.0139 neutral ZNF638 2 71649966 A G 25363760 0.0081 neutral DYSF 2 71788955 C T 25363760 0.5439 deleterious DYSF 2 71797809 C T 25363760 CYP26B1 2 72362470 G A 25363760 0.8497 deleterious ALMS1 2 73800198 A C 25363760 0.1971 neutral DUSP11 2 73989820 A T 25363760 0.0295 neutral SLC4A5 2 74483044 T C 25363760 0.9962 deleterious MOGS 2 74689442 C T 25363760 0.2396 neutral SFTPB 2 85892817 C T 25363760 0.0072 neutral PTCD3 2 86333407 C T 25363760 0.2204 neutral KDM3A 2 86678313 A T 25363760 PROM2 2 95943281 C A 25363760 SNRNP200 2 96962741 T C 25363760 0.9999 deleterious CNNM4 2 97464939 C T 25363760 ZAP70 2 98354242 C T 25363760 0.7845 deleterious CNGA3 2 99006180 G A 25363760 0.1936 neutral INPP4A 2 99163073 T C 25363760 0.5759 deleterious IL1RL1 2 102965622 G A 25363760 0.3204 neutral SEPT10 2 110310766 A G 25363760 SEPT10 2 110323354 C G 25363760 0.9747 deleterious NPHP1 2 110901141 T G 25363760 MERTK 2 112732928 A G 25363760 FBLN7 2 112922678 G A 25363760 SLC20A1 2 113417216 G T 25363760 0.8294 deleterious PSD4 2 113940833 C T 25363760 0.1058 neutral CLASP1 2 122122758 T G 25363760 0.8044 deleterious MAP3K2 2 128095324 CTCT C 25363760 UGGT1 2 128917217 TTCA T 25363760 SMPD4 2 130912761 C T 25363760 0.423 neutral RIF1 2 152321326 G A 25363760 PRPF40A 2 153528972 C T 25363760 ACVR1 2 158622623 G A 25363760 TBR1 2 162274307 G T 25363760 0.9874 deleterious TBR1 2 162275553 A C 25363760 0.9879 deleterious DPP4 2 162891779 T TA 25363760 KCNH7 2 163302876 G C 25363760 0.9832 deleterious SCN2A 2 166152578 A G 25363760 0.9878 deleterious SCN2A 2 166170231 G A 25363760 0.9976 deleterious SCN2A 2 166170231 G A 25363760 0.9976 deleterious SCN2A 2 166183403 T TA 25363760 SCN2A 2 166201312 G A 25363760 0.9987 deleterious SCN2A 2 166245137 A T 25363760 GALNT3 2 166613697 G A 25363760 0.8997 deleterious SCN1A 2 166848859 C G 25363760 0.2117 neutral SCN7A 2 167322357 G A 25363760 XIRP2 2 168103957 C T 25363760 0.0293 neutral LRP2 2 170030556 G C 25363760 0.8903 deleterious TLK1 2 171863055 A G 25363760 0.6724 deleterious RAPGEF4 2 173898693 G A 25363760 ATF2 2 175976331 A G 25363760 0.0006 neutral PDE11A 2 178494223 C T 25363760 TTN 2 179434864 C T 25363760 0.533 deleterious TTN 2 179435034 A G 25363760 TTN 2 179439424 C A 25363760 0.041 neutral TTN 2 179575512 G A 25363760 TTN 2 179582496 C T 25363760 0.1735 neutral TTN 2 179584745 C T 25363760 0.4944 deleterious TTN 2 179634424 C G 25363760 0.9743 deleterious TTN 2 179641336 C T 25363760 0.2519 neutral ZNF804A 2 185798420 C T 25363760 0.9886 deleterious COL5A2 2 189907974 C T 25363760 0.9999 deleterious WDR75 2 190323576 A T 25363760 0.0017 neutral TMEFF2 2 192818494 A G 25363760 DNAH7 2 196640603 A C 25363760 DNAH7 2 196729541 C A 25363760 0.0296 neutral SF3B1 2 198274638 A G 25363760 0.9884 deleterious SF3B1 2 198281565 G A 25363760 0.1313 neutral PHOCN 2 198388394 C T 25363760 ALS2 2 202569184 G A 25363760 0.9996 deleterious ICA1L 2 203693714 G A 25363760 0.2719 neutral CYP20A1 2 204161598 A G 25363760 ZDBF2 2 207173105 A T 25363760 0.0241 neutral ZDBF2 2 207175071 C T 25363760 0.0256 neutral ZDBF2 2 207176286 C T 25363760 0.141 neutral PIKFYVE 2 209167007 G A 25363760 0.9779 deleterious CPS1 2 211466977 C T 25363760 0.566 deleterious ABCA12 2 215852457 C T 25363760 0.3767 neutral FN1 2 216259404 C T 25363760 0.4875 neutral SMARCAL1 2 217300128 G A 25363760 0.2645 neutral VIL1 2 219294054 G A 25363760 0.9967 deleterious VIL1 2 219297564 G A 25363760 0.5582 deleterious PLCD4 2 219483415 C T 25363760 0.6729 deleterious CRYBA2 2 219855593 G A 25363760 0.3005 neutral SPEG 2 220353298 G T 25363760 0.8241 deleterious GMPPA 2 220370245 C G 25363760 0.9003 deleterious TMEM198 2 220414519 T C 25363760 OBSL1 2 220422963 C T 25363760 0.9883 deleterious SCG2 2 224463202 C A 25363760 0.5125 deleterious FAM124B 2 225266192 G T 25363760 IRS1 2 227661674 C T 25363760 0.0616 neutral IRS1 2 227662573 G A 25363760 SP110 2 231074661 G A 25363760 0.15 neutral GIGYF2 2 233704659 G A 25363760 0.9926 deleterious DGKD 2 234350581 C CG 25363760 DGKD 2 234356988 G A 25363760 SPP2 2 234969088 TC T 25363760 PRLH 2 238475709 G A 25363760 0.6275 deleterious LRRFIP1 2 238671886 C T 25363760 LRRFIP1 2 238671960 C T 25363760 0.0013 neutral ASB1 2 239344638 C A 25363760 0.4041 deleterious C2orf54 2 241835121 C T 25363760 HDLBP 2 242196047 G A 25363760 0.8405 deleterious STK25 2 242435818 C T 25363760 D2HGDH 2 242694601 G C 25363760 CNTN4 3 2967383 C T 25363760 ITPR1 3 4703923 G C 25363760 0.956 deleterious SETD5 3 9483388 C T 25363760 SETD5 3 9486949 G A 25363760 0.0772 neutral SETD5 3 9517219 G C 25363760 0.7084 deleterious ARPC4-TTLL3 3 9854936 T A 25363760 0.038 neutral TTLL3 3 9870673 A C 25363760 0.6545 deleterious TTLL3 3 9871026 C T 25363760 0.0713 neutral TMEM111 3 10028342 C T 25363760 TATDN2 3 10301993 G A 25363760 0.7643 deleterious SLC6A1 3 11068045 G A 25363760 0.9997 deleterious C3orf19 3 14703152 C T 25363760 ZFYVE20 3 15123893 T A 25363760 CLASP2 3 33558580 C T 25363760 0.6494 deleterious MLH1 3 37081770 A C 25363760 0.9197 deleterious DLEC1 3 38101247 A G 25363760 0.0495 neutral ACAA1 3 38178135 C A 25363760 MYRIP 3 40085652 C T 25363760 0.0342 neutral RPL14 3 40500225 C A 25363760 0.0887 neutral ZNF445 3 44488106 C G 25363760 TMEM42 3 44905765 G A 25363760 0.1276 neutral NBEAL2 3 47036870 G A 25363760 0.008 neutral SETD2 3 47161785 G A 25363760 SETD2 3 47164140 T C 25363760 SMARCC1 3 47702879 T C 25363760 0.968 deleterious PLXNB1 3 48455355 CA C 25363760 COL7A1 3 48606872 C T 25363760 0.3062 neutral COL7A1 3 48606873 G T 25363760 COL7A1 3 48606874 T G 25363760 0.027 neutral QRICH1 3 49114314 TG T 25363760 DAG1 3 49570115 C T 25363760 0.1871 neutral BSN 3 49694871 C T 25363760 0.9262 deleterious RNF123 3 49753101 A G 25363760 0.9794 deleterious GMPPB 3 49759429 A G 25363760 0.9902 deleterious SEMA3F 3 50211299 G C 25363760 0.0035 neutral VPRBP 3 51452176 G A 25363760 0.7028 deleterious RAD54L2 3 51696843 C T 25363760 0.4117 neutral TLR9 3 52256514 G A 25363760 DNAH1 3 52356651 C T 25363760 0.0038 neutral DNAH1 3 52409336 C T 25363760 0.5927 deleterious BAP1 3 52437518 C T 25363760 0.9268 deleterious NISCH 3 52492846 C G 25363760 0.4588 neutral NT5DC2 3 52558490 C T 25363760 0.4739 deleterious PBRM1 3 52582238 G A 25363760 CACNA1D 3 53757544 G A 25363760 0.8914 deleterious CACNA2D3 3 54872646 G T 25363760 FAM116A 3 57614045 C T 25363760 FLNB 3 58139188 T C 25363760 0.7949 deleterious FLNB 3 58145363 A C 25363760 0.4978 deleterious PTPRG 3 62258653 T C 25363760 0.9782 deleterious CADPS 3 62543117 C T 25363760 MINA 3 97673295 C T 25363760 OR5AC2 3 97806355 A G 25363760 ST3GAL6 3 98510684 G C 25363760 LNP1 3 100170600 A T 25363760 0.041 neutral SENP7 3 101066863 T C 25363760 0.0463 neutral CD47 3 107778378 T C 25363760 SLC9A10 3 111873844 C T 25363760 SLC9A10 3 111886156 A C 25363760 SPICE1 3 113187041 C A 25363760 0.9392 deleterious KIAA2018 3 113376331 G A 25363760 PLA1A 3 119327736 CT C 25363760 C3orf15 3 119427440 C T 25363760 GSK3B 3 119582433 G T 25363760 0.7971 deleterious POLQ 3 121212507 T C 25363760 KPNA1 3 122215306 C T 25363760 0.8911 deleterious PARP14 3 122422695 A C 25363760 0.054 neutral HEG1 3 124732039 G A 25363760 0.1396 neutral PLXNA1 3 126726747 C T 25363760 PLXNA1 3 126730873 G A 25363760 0.9932 deleterious PLXNA1 3 126749110 G A 25363760 0.9908 deleterious MCM2 3 127327353 C T 25363760 NUDT16 3 131100722 C G 25363760 0.1443 neutral DNAJC13 3 132175637 C T 25363760 0.8212 deleterious TXNDC6 3 138038425 T C 25363760 ZBTB38 3 141163172 C G 25363760 0.1487 neutral CPA3 3 148614417 C T 25363760 0.0953 neutral CP 3 148896396 C G 25363760 0.6225 deleterious P2RY13 3 151046382 T C 25363760 AADAC 3 151538186 A C 25363760 0.8851 deleterious MBNL1 3 152132749 A G 25363760 0.7976 deleterious P2RY1 3 152554279 T C 25363760 PLCH1 3 155199428 G A 25363760 0.0442 neutral NMD3 3 160960410 G A 25363760 0.1799 neutral MECOM 3 168819995 A G 25363760 0.5612 deleterious MECOM 3 168838891 C T 25363760 0.7881 deleterious FNDC3B 3 172048426 C T 25363760 0.3595 neutral GNB4 3 179123022 T C 25363760 0.9995 deleterious TTC14 3 180320187 G T 25363760 TTC14 3 180328097 C T 25363760 0.1496 neutral MCF2L2 3 182923938 C T 25363760 0.2866 neutral KLHL6 3 183209871 G C 25363760 0.4651 deleterious ABCC5 3 183682987 T G 25363760 0.9764 deleterious EIF2B5 3 183861920 T G 25363760 0.9854 deleterious ECE2 3 183994332 G A 25363760 0.0244 neutral VPS8 3 184632833 A G 25363760 0.9673 deleterious RTP2 3 187419873 T A 25363760 0.2964 neutral FGF12 3 192078290 G A 25363760 MUC4 3 195515997 G T 25363760 0.0159 neutral AC069257.9.1 3 195955097 C A 25363760 MFI2 3 196753547 G A 25363760 GAK 4 898481 G A 25363760 0.2725 neutral SPON2 4 1161406 A G 25363760 0.9998 deleterious SPON2 4 1164292 C T 25363760 0.5737 deleterious KIAA1530 4 1377656 A C 25363760 WHSC1 4 1920309 GC G 25363760 MXD4 4 2259719 C T 25363760 0.8968 deleterious NOP14 4 2940996 C T 25363760 0.886 deleterious RGS12 4 3441281 G A 25363760 0.5771 deleterious MRFAP1 4 6642942 T A 25363760 0.8383 deleterious SORCS2 4 7716910 C T 25363760 SH3TC1 4 8207326 G A 25363760 METTL19 4 8467199 C T 25363760 CPZ 4 8620216 C T 25363760 0.0953 neutral SLC2A9 4 9943577 G A 25363760 CLNK 4 10567654 T C 25363760 0.0992 neutral FBXL5 4 15640246 T G 25363760 PACRGL 4 20714481 A G 25363760 0.0068 neutral DHX15 4 24550500 T C 25363760 0.2969 neutral KLB 4 39436024 T C 25363760 N4BP2 4 40104472 C G 25363760 0.0428 neutral LIMCH1 4 41646619 G A 25363760 LIMCH1 4 41646620 G A 25363760 0.4164 neutral ATP8A1 4 42583745 C T 25363760 0.1483 neutral GABRB1 4 47033990 GAT G 25363760 TEC 4 48147297 C T 25363760 FRYL 4 48563484 C T 25363760 LNX1 4 54362459 A T 25363760 0.0152 neutral SRD5A3 4 56236104 T A 25363760 0.9948 deleterious CEP135 4 56846457 A G 25363760 0.3248 neutral REST 4 57798002 C G 25363760 0.2049 neutral EPHA5 4 66270142 T C 25363760 UBA6 4 68497606 A G 25363760 GNRHR 4 68619768 G A 25363760 0.9626 deleterious UGT2B7 4 69962514 A G 25363760 UGT2B4 4 70359486 T C 25363760 RUFY3 4 71588304 C T 25363760 0.8899 deleterious RUFY3 4 71629352 A G 25363760 0.9355 deleterious ANKRD17 4 73957308 CTGT C 25363760 ANKRD17 4 74026943 C T 25363760 0.0863 neutral CCDC158 4 77288477 A G 25363760 CCNI 4 77969491 G A 25363760 0.1277 neutral CCNG2 4 78087056 A G 25363760 CDS1 4 85530630 G A 25363760 WDFY3 4 85609385 C T 25363760 0.2294 neutral WDFY3 4 85742365 T A 25363760 0.9134 deleterious PTPN13 4 87705622 C G 25363760 0.1462 neutral SPARCL1 4 88416183 C A 25363760 GPRIN3 4 90170534 C G 25363760 0.0573 neutral FAM190A 4 91549237 C T 25363760 GRID2 4 94377044 C G 25363760 0.2351 neutral HPGDS 4 95220672 C T 25363760 0.0001 neutral MANBA 4 103592542 A G 25363760 LEF1 4 108984799 C T 25363760 0.3011 neutral RRH 4 110763634 A G 25363760 0.1169 neutral ANK2 4 114214640 C G 25363760 0.0663 neutral ANK2 4 114254247 C T 25363760 ANK2 4 114264189 C G 25363760 0.5164 deleterious METTL14 4 119626841 A G 25363760 0.7268 deleterious NDNF 4 121961207 T C 25363760 0.9567 deleterious KIAA1109 4 123140507 G A 25363760 0.9913 deleterious NUDT6 4 123814039 T A 25363760 FAT4 4 126240148 T A 25363760 0.4875 neutral FAT4 4 126336650 G A 25363760 0.4875 neutral FAT4 4 126411350 C T 25363760 0.4875 neutral INTU 4 128595288 C T 25363760 NAA15 4 140262130 C G 25363760 NAA15 4 140272765 G T 25363760 0.9903 deleterious USP38 4 144134980 G A 25363760 SMARCA5 4 144442658 C A 25363760 0.9638 deleterious SH3D19 4 152043356 C A 25363760 ACCN5 4 156764934 T C 25363760 GRIA2 4 158234012 C T 25363760 GRIA2 4 158254055 C T 25363760 RAPGEF2 4 160264456 C G 25363760 0.7022 deleterious CPE 4 166414361 A G 25363760 CLCN3 4 170618808 G A 25363760 0.029 neutral UFSP2 4 186336914 A C 25363760 FAT1 4 187524608 T C 25363760 0.1151 neutral FAT1 4 187538324 T G 25363760 0.203 neutral PDCD6 5 306768 G A 25363760 0.6784 deleterious TERT 5 1264586 C T 25363760 0.3907 neutral SLC6A3 5 1414895 G A 25363760 0.9992 deleterious KIAA0947 5 5457449 A C 25363760 FASTKD3 5 7867278 C T 25363760 0.0904 neutral TRIO 5 14389434 AT A 25363760 TRIO 5 14485178 G C 25363760 0.6699 deleterious PRDM9 5 23522893 T C 25363760 0.5218 deleterious MTMR12 5 32263299 C T 25363760 AMACR 5 33989381 G A 25363760 RANBP3L 5 36255592 C T 25363760 0.8836 deleterious DAB2 5 39376856 G C 25363760 0.0563 neutral GPX8 5 54456842 G A 25363760 RGS7BP 5 63802408 G T 25363760 TRIM23 5 64887621 G A 25363760 0.8439 deleterious ERBB2IP 5 65338903 A T 25363760 CCNB1 5 68471298 T C 25363760 MAP1B 5 71491094 G T 25363760 0.9116 deleterious GFM2 5 74017586 G T 25363760 0.7684 deleterious FAM169A 5 74130375 AATTC A 25363760 COL4A3BP 5 74675192 T C 25363760 COL4A3BP 5 74721237 A G 25363760 0.4536 neutral AGGF1 5 76342465 T G 25363760 0.8638 deleterious EDIL3 5 83433140 T G 25363760 0.4087 neutral MEF2C 5 88100432 T C 25363760 0.9929 deleterious NR2F1 5 92921034 C T 25363760 0.9707 deleterious MCTP1 5 94620051 T G 25363760 FAM81B 5 94756094 G A 25363760 0.9374 deleterious CHD1 5 98216794 G C 25363760 0.9805 deleterious CHD1 5 98235279 G A 25363760 YTHDC2 5 112860714 A G 25363760 YTHDC2 5 112899557 C T 25363760 0.6882 deleterious TICAM2 5 114952066 T A 25363760 SEMA6A 5 115840614 A T 25363760 DMXL1 5 118485784 C T 25363760 0.0031 neutral SNCAIP 5 121787121 C T 25363760 0.0332 neutral GRAMD3 5 125820090 G C 25363760 FNIP1 5 131013499 T C 25363760 P4HA2 5 131534615 T C 25363760 0.9996 deleterious PHF15 5 133871563 C T 25363760 TGFBI 5 135385199 C A 25363760 REEP2 5 137781275 G A 25363760 LRRTM2 5 138209298 G A 25363760 CXXC5 5 139060538 C A 25363760 0.4551 neutral ANKHD1-EIF4EBP3 5 139889224 G A 25363760 PCDHA5 5 140203699 C A 25363760 0.0128 neutral PCDHA13 5 140263769 A T 25363760 0.8338 deleterious PCDHB16 5 140563351 A G 25363760 0.281 neutral PCDHGB1 5 140731183 C T 25363760 DIAPH1 5 140913939 C G 25363760 0.7899 deleterious PLAC8L1 5 145477815 G A 25363760 0.0939 neutral POU4F3 5 145719811 G C 25363760 0.8212 deleterious PDE6A 5 149323838 G C 25363760 SLC6A7 5 149584134 G A 25363760 0.9997 deleterious TCOF1 5 149771544 C T 25363760 0.4875 neutral TNIP1 5 150444567 C T 25363760 FAT2 5 150930211 C G 25363760 FAT2 5 150948279 G A 25363760 0.7741 deleterious GRIA1 5 153144076 G A 25363760 0.9628 deleterious ITK 5 156649954 C T 25363760 0.8587 deleterious PWWP2A 5 159520099 G A 25363760 0.92 deleterious ATP10B 5 160049576 G A 25363760 0.9897 deleterious GABRG2 5 161576159 G A 25363760 0.8666 deleterious SLIT3 5 168112800 G A 25363760 GABRP 5 170239115 G A 25363760 RANBP17 5 170667997 ATC A 25363760 RANBP17 5 170722942 C T 25363760 FBXW11 5 171337706 G C 25363760 0.0088 neutral NSD1 5 176684041 T C 25363760 0.8708 deleterious SLC34A1 5 176813540 A G 25363760 0.873 deleterious SLC34A1 5 176824788 C T 25363760 0.9993 deleterious ZNF354B 5 178310041 G A 25363760 RUFY1 5 179023604 G A 25363760 0.0301 neutral MGAT4B 5 179225962 G A 25363760 0.6835 deleterious GFPT2 5 179763552 G A 25363760 EXOC2 6 553870 T C 25363760 0.4935 deleterious WRNIP1 6 2784633 G A 25363760 0.9304 deleterious SLC22A23 6 3273431 G A 25363760 0.2415 neutral SLC22A23 6 3284159 CCACGATGGAAAA C 25363760 MAK 6 10802142 G A 25363760 HIVEP1 6 12123505 A G 25363760 HIVEP1 6 12164097 C T 25363760 JARID2 6 15517480 TGATGTACC T 25363760 KDM1B 6 18171678 C T 25363760 GPLD1 6 24436916 C A 25363760 0.9122 deleterious ALDH5A1 6 24523086 G A 25363760 0.4536 neutral BTN3A1 6 26413449 G A 25363760 ZKSCAN4 6 28213477 T C 25363760 0.0067 neutral ZNF311 6 28963322 C T 25363760 0.148 neutral HLA-E 6 30457613 A G 25363760 0.2075 neutral ABCF1 6 30554028 C T 25363760 0.3893 neutral KIAA1949 6 30652620 G C 25363760 MDC1 6 30672041 C T 25363760 0.244 neutral MDC1 6 30681921 A G 25363760 0.4896 deleterious LY6G6F 6 31675849 G A 25363760 0.0181 neutral MSH5 6 31726346 G A 25363760 0.1408 neutral VARS 6 31747474 C A 25363760 0.427 neutral VARS 6 31760609 G A 25363760 0.1374 neutral TNXB 6 32020552 C T 25363760 0.0181 neutral NOTCH4 6 32168932 C T 25363760 HLA-DQA1 6 32609173 C G 25363760 0.0092 neutral SYNGAP1 6 33391326 G A 25363760 0.2478 neutral SYNGAP1 6 33405763 C T 25363760 SYNGAP1 6 33408610 TC T 25363760 SYNGAP1 6 33411228 C T 25363760 SYNGAP1 6 33414451 GAACA G 25363760 UHRF1BP1 6 34824175 G A 25363760 0.0619 neutral ANKS1A 6 34985466 C T 25363760 0.0531 neutral SCUBE3 6 35200730 C A 25363760 ZNF76 6 35259464 G A 25363760 0.9819 deleterious PI16 6 36926932 G A 25363760 NFYA 6 41046839 A G 25363760 0.8242 deleterious UBR2 6 42627568 C G 25363760 0.5125 deleterious UBR2 6 42631075 G A 25363760 0.5125 deleterious PTK7 6 43107166 A C 25363760 CUL9 6 43191842 G A 25363760 0.2007 neutral ZNF318 6 43309923 C A 25363760 0.9287 deleterious POLR1C 6 43487568 G A 25363760 0.9711 deleterious XPO5 6 43492367 T C 25363760 0.7446 deleterious SLC29A1 6 44201210 G A 25363760 0.0198 neutral SLC35B2 6 44224229 C G 25363760 0.0013 neutral SUPT3H 6 44971489 C G 25363760 0.1501 neutral PLA2G7 6 46684253 G A 25363760 0.8577 deleterious ZNF451 6 57017096 C T 25363760 0.6155 deleterious TTK 6 80721204 C T 25363760 TPBG 6 83075603 C A 25363760 0.6249 deleterious ME1 6 83921732 T A 25363760 0.153 neutral TBX18 6 85470056 C G 25363760 0.5665 deleterious ZNF292 6 87925717 C T 25363760 AKIRIN2 6 88385638 C T 25363760 0.1779 neutral PRDM1 6 106536222 C T 25363760 AIM1 6 106960441 C A 25363760 0.0617 neutral BEND3 6 107391881 T C 25363760 0.0941 neutral ARMC2 6 109233595 T A 25363760 SESN1 6 109309811 T G 25363760 0.6379 deleterious REV3L 6 111714164 G A 25363760 0.0785 neutral TSPYL4 6 116574302 G T 25363760 RSPH4A 6 116953391 A G 25363760 ROS1 6 117724420 A G 25363760 C6orf204 6 118887070 C T 25363760 C6orf170 6 121638649 A G 25363760 HBS1L 6 135290444 G A 25363760 MAP7 6 136682268 G T 25363760 0.4981 deleterious PERP 6 138428392 G C 25363760 0.903 deleterious UTRN 6 144747566 C T 25363760 STXBP5 6 147635412 A G 25363760 0.0088 neutral STXBP5 6 147680342 TC T 25363760 PLEKHG1 6 151151887 G A 25363760 0.3987 neutral SYNE1 6 152673328 C T 25363760 0.6295 deleterious SYNE1 6 152728223 C T 25363760 0.021 neutral CNKSR3 6 154727783 T C 25363760 0.7215 deleterious ARID1B 6 157488271 C T 25363760 ARID1B 6 157488314 C A 25363760 ARID1B 6 157527390 C CG 25363760 ARID1B 6 157528178 A G 25363760 0.0832 neutral ZDHHC14 6 158014030 C T 25363760 IGF2R 6 160524825 A G 25363760 0.0036 neutral PLG 6 161139767 G T 25363760 0.186 neutral C6orf118 6 165723092 G A 25363760 WDR27 6 170065622 G A 25363760 0.0009 neutral TCTE3 6 170140390 ATC A 25363760 C6orf70 6 170175414 C T 25363760 FAM120B 6 170627963 A C 25363760 0.0319 neutral PRKAR1B 7 720252 G A 25363760 MICALL2 7 1476392 G A 25363760 INTS1 7 1542695 G A 25363760 0.7223 deleterious INTS1 7 1542787 CT C 25363760 MAD1L1 7 2041753 G A 25363760 IQCE 7 2629665 A G 25363760 0.0341 neutral ACTB 7 5567705 A G 25363760 0.9641 deleterious RNF216 7 5752394 C T 25363760 0.6694 deleterious DAGLB 7 6449422 A G 25363760 ETV1 7 13978754 A G 25363760 0.7024 deleterious ETV1 7 14025837 C T 25363760 AGMO 7 15470670 G A 25363760 0.6438 deleterious SNX13 7 17843170 T C 25363760 0.8027 deleterious MACC1 7 20199071 T C 25363760 0.6851 deleterious DNAH11 7 21747364 G A 25363760 DNAH11 7 21765433 C G 25363760 0.3026 neutral CDCA7L 7 21947980 G A 25363760 0.0385 neutral DFNA5 7 24742438 C T 25363760 0.0464 neutral OSBPL3 7 24932001 G A 25363760 INMT 7 30791907 G A 25363760 NT5C3 7 33055445 A G 25363760 GLI3 7 42005456 T G 25363760 0.974 deleterious OGDH 7 44734101 A G 25363760 0.7917 deleterious MYO1G 7 45004575 C T 25363760 0.4755 neutral CCM2 7 45067319 C T 25363760 0.0056 neutral C7orf57 7 48092480 C T 25363760 UPP1 7 48147088 C T 25363760 ABCA13 7 48287839 C T 25363760 0.177 neutral ABCA13 7 48318773 A G 25363760 0.0545 neutral ABCA13 7 48335416 C T 25363760 ABCA13 7 48390312 A G 25363760 0.5617 deleterious IKZF1 7 50467738 G C 25363760 0.121 neutral GRB10 7 50694583 G A 25363760 COBL 7 51287624 C G 25363760 0.9893 deleterious BAZ1B 7 72892108 T A 25363760 0.5017 deleterious SRRM3 7 75894088 G A 25363760 0.3877 neutral YWHAG 7 75959490 T G 25363760 0.9564 deleterious PION 7 76950113 T A 25363760 GNAI1 7 79846700 T C 25363760 0.6652 deleterious HGF 7 81336665 G T 25363760 ADAM22 7 87760687 G A 25363760 0.5125 deleterious AKAP9 7 91691610 T A 25363760 0.6974 deleterious C7orf64 7 92161752 T G 25363760 ASB4 7 95157379 C T 25363760 DYNC1I1 7 95661998 A G 25363760 0.1446 neutral LMTK2 7 97816289 A G 25363760 0.9165 deleterious TRRAP 7 98478779 G A 25363760 SMURF1 7 98633340 C T 25363760 PTCD1 7 99021500 G A 25363760 ZKSCAN5 7 99123456 A G 25363760 0.0017 neutral ZKSCAN5 7 99128899 T C 25363760 0.0408 neutral CYP3A5 7 99260477 A G 25363760 0.0673 neutral CYP3A7 7 99305541 C G 25363760 0.0639 neutral ZSCAN21 7 99661772 A G 25363760 C7orf43 7 99755468 T G 25363760 0.3964 neutral GNB2 7 100274988 G A 25363760 0.9834 deleterious ACHE 7 100491066 G A 25363760 0.9692 deleterious MUC12 7 100636140 G T 25363760 MUC17 7 100696348 G C 25363760 CUX1 7 101821789 T C 25363760 0.0366 neutral RELN 7 103162572 A G 25363760 0.9014 deleterious RELN 7 103322603 G A 25363760 MLL5 7 104731771 G A 25363760 SRPK2 7 104783696 G A 25363760 CBLL1 7 107399132 T G 25363760 0.0011 neutral LAMB1 7 107564710 A G 25363760 0.667 deleterious LAMB4 7 107669504 C G 25363760 0.2014 neutral PPP1R3A 7 113519766 G A 25363760 MET 7 116414960 C T 25363760 ST7 7 116593742 A C 25363760 0.3325 neutral ASZ1 7 117022166 A C 25363760 0.0996 neutral IQUB 7 123109383 G A 25363760 0.7333 deleterious ASB15 7 123270114 C T 25363760 0.0427 neutral SPAM1 7 123599930 A G 25363760 LRRC4 7 127670682 CAA C 25363760 TNPO3 7 128610260 G C 25363760 0.9714 deleterious CPA1 7 130025065 T C 25363760 0.7626 deleterious STRA8 7 134936580 C T 25363760 NUP205 7 135277850 G A 25363760 UBN2 7 138967816 C G 25363760 0.1421 neutral LUC7L2 7 139102437 C G 25363760 0.1047 neutral NDUFB2 7 140402787 T C 25363760 0.6457 deleterious BRAF 7 140481409 A C 25363760 0.9893 deleterious CASP2 7 142988644 T C 25363760 0.0046 neutral CUL1 7 148495113 T A 25363760 ZNF777 7 149129928 A G 25363760 0.0536 neutral REPIN1 7 150068799 C T 25363760 ACCN3 7 150747627 A T 25363760 ABCF2 7 150915221 C A 25363760 MLL3 7 151845251 C G 25363760 MLL3 7 151932977 AC A 25363760 RBM33 7 155504129 C T 25363760 0.8735 deleterious ZNF596 8 196337 A C 25363760 0.289 neutral ERICH1 8 618638 A G 25363760 DLGAP2 8 1497496 A G 25363760 0.0415 neutral ARHGEF10 8 1806141 A G 25363760 0.0066 neutral MYOM2 8 2027642 C T 25363760 CSMD1 8 3265577 C T 25363760 0.0409 neutral MCPH1 8 6500546 T A 25363760 AGPAT5 8 6605326 G A 25363760 0.4875 neutral ERI1 8 8877895 G A 25363760 0.9997 deleterious MSRA 8 10285789 C T 25363760 RP1L1 8 10464932 C G 25363760 0.1317 neutral RP1L1 8 10468390 C T 25363760 0.2433 neutral GATA4 8 11606467 A C 25363760 0.6568 deleterious ZDHHC2 8 17055913 A G 25363760 0.9955 deleterious EPB49 8 21931296 C T 25363760 KIAA1967 8 22476678 G A 25363760 0.1793 neutral EGR3 8 22548464 T A 25363760 0.0518 neutral DOCK5 8 25258469 C T 25363760 0.9869 deleterious DPYSL2 8 26501494 C A 25363760 0.453 neutral STMN4 8 27097681 T C 25363760 PTK2B 8 27308294 G A 25363760 0.062 neutral SCARA3 8 27516996 G T 25363760 KIF13B 8 28976449 G C 25363760 0.1262 neutral TEX15 8 30701097 T C 25363760 0.0765 neutral TEX15 8 30702135 C T 25363760 0.0218 neutral UNC5D 8 35616983 G A 25363760 0.9012 deleterious ADRB3 8 37823742 G A 25363760 ASH2L 8 37986409 T C 25363760 ADAM2 8 39645715 T C 25363760 0.1951 neutral PLAT 8 42042618 G C 25363760 0.4414 neutral MCM4 8 48883381 G C 25363760 0.3055 neutral MCM4 8 48883927 G A 25363760 SNTG1 8 51314822 T C 25363760 0.337 neutral SNTG1 8 51705253 T A 25363760 0.097 neutral PXDNL 8 52359655 T C 25363760 PXDNL 8 52366170 C T 25363760 NPBWR1 8 53852827 CTTCT C 25363760 OPRK1 8 54142225 G T 25363760 0.2319 neutral VCPIP1 8 67579130 G A 25363760 STAU2 8 74600948 T C 25363760 0.9074 deleterious CA3 8 86356291 A T 25363760 0.5125 deleterious CNGB3 8 87588114 G T 25363760 MMP16 8 89068423 G T 25363760 0.2405 neutral NIPAL2 8 99217397 A G 25363760 0.4441 neutral PABPC1 8 101730092 T C 25363760 0.4201 neutral UBR5 8 103281231 T C 25363760 0.4875 neutral OXR1 8 107718722 A C 25363760 0.9823 deleterious PKHD1L1 8 110478863 A G 25363760 0.147 neutral EXT1 8 119122786 G A 25363760 0.9929 deleterious HAS2 8 122641398 G A 25363760 RNF139 8 125499557 C T 25363760 0.1874 neutral GSDMC 8 130760786 A T 25363760 EFR3A 8 132952779 G A 25363760 0.9932 deleterious KCNQ3 8 133192475 G A 25363760 0.6706 deleterious TRAPPC9 8 141381255 G A 25363760 0.51 deleterious TSNARE1 8 143425442 G A 25363760 SCRIB 8 144891120 G A 25363760 0.2495 neutral PUF60 8 144899878 G A 25363760 0.0141 neutral PLEC 8 144995364 G A 25363760 DGAT1 8 145540331 G C 25363760 0.7223 deleterious SCRT1 8 145557230 G A 25363760 0.4356 neutral MFSD3 8 145735789 C T 25363760 LRRC14 8 145745111 T C 25363760 0.0406 neutral LRRC14 8 145746113 G A 25363760 0.1502 neutral ZNF250 8 146107658 T C 25363760 0.3864 neutral FOXD4 9 117998 G T 25363760 0.0156 neutral DOCK8 9 452034 GT G 25363760 DMRT2 9 1056868 C T 25363760 DMRT2 9 1057229 A G 25363760 0.9652 deleterious RFX3 9 3263017 G T 25363760 0.1153 neutral GLDC 9 6534708 G A 25363760 MPDZ 9 13140074 A G 25363760 MPDZ 9 13247770 C T 25363760 0.5125 deleterious DENND4C 9 19360248 T G 25363760 0.0221 neutral ACER2 9 19446308 G C 25363760 0.9942 deleterious KIAA1797 9 20926307 C T 25363760 TOPORS 9 32542613 G A 25363760 0.0011 neutral NOL6 9 33468867 G A 25363760 UBAP2 9 33948584 G A 25363760 0.9606 deleterious KIF24 9 34259682 C T 25363760 0.9406 deleterious UNC13B 9 35382420 G A 25363760 RUSC2 9 35559246 T G 25363760 0.8135 deleterious CCIN 9 36170717 AG A 25363760 CCIN 9 36170719 G C 25363760 0.8213 deleterious DCAF10 9 37861232 T C 25363760 SHB 9 37974819 T C 25363760 0.0707 neutral ZFAND5 9 74975090 G A 25363760 ANXA1 9 75777757 G A 25363760 0.4809 deleterious PRUNE2 9 79325023 G A 25363760 0.026 neutral ECM2 9 95285164 A C 25363760 PTPDC1 9 96860735 T C 25363760 TEX10 9 103066077 C T 25363760 0.8196 deleterious ZNF462 9 109697811 CG C 25363760 AKAP2 9 112898448 C T 25363760 TLR4 9 120475490 A G 25363760 0.0132 neutral PDCL 9 125582651 C T 25363760 0.0396 neutral STRBP 9 125909143 T C 25363760 CRB2 9 126133005 C T 25363760 0.0879 neutral RPL35 9 127620304 G A 25363760 0.8988 deleterious PBX3 9 128678099 G C 25363760 0.9969 deleterious RPL12 9 130210655 G A 25363760 STXBP1 9 130444788 C T 25363760 0.9987 deleterious FPGS 9 130575637 A AC 25363760 ENDOG 9 131584649 C T 25363760 NUP188 9 131721169 A G 25363760 0.9731 deleterious CRAT 9 131857751 G A 25363760 SETX 9 135172298 G C 25363760 TTF1 9 135278051 T C 25363760 0.0062 neutral SEC16A 9 139371548 G A 25363760 0.0984 neutral TPRN 9 140087111 C T 25363760 C9orf167 9 140173375 C T 25363760 CACNA1B 9 140772650 A G 25363760 0.4965 deleterious GTPBP4 10 1061781 G A 25363760 0.6635 deleterious PFKP 10 3124608 G A 25363760 0.1146 neutral PITRM1 10 3185641 G A 25363760 0.1531 neutral FAM208B 10 5788619 A G 25363760 0.0167 neutral IL15RA 10 6002348 C T 25363760 0.001 neutral CAMK1D 10 12595287 G A 25363760 CAMK1D 10 12595343 C A 25363760 0.8065 deleterious CUBN 10 16962087 C T 25363760 PTPLA 10 17645573 G C 25363760 GAD2 10 26589827 G A 25363760 SVIL 10 29769625 C A 25363760 ZNF438 10 31138594 G A 25363760 0.0105 neutral CREM 10 35500293 C T 25363760 ZNF485 10 44112244 C T 25363760 LRRC18 10 50121522 T C 25363760 0.0291 neutral ERCC6 10 50691429 C T 25363760 0.5125 deleterious DKK1 10 54074405 G A 25363760 0.4552 neutral SLC16A9 10 61432662 C A 25363760 0.998 deleterious CCDC6 10 61552824 G C 25363760 0.682 deleterious ARID5B 10 63759976 T TG 25363760 JMJD1C 10 64967942 T C 25363760 0.0479 neutral DNA2 10 70181995 A C 25363760 0.9858 deleterious DDX50 10 70673870 A G 25363760 UNC5B 10 73046511 C T 25363760 CDH23 10 73464800 G A 25363760 0.9718 deleterious CDH23 10 73491982 C T 25363760 FUT11 10 75535200 A G 25363760 0.0045 neutral NDST2 10 75566524 C T 25363760 0.9168 deleterious VDAC2 10 76970931 A G 25363760 KCNMA1 10 78869948 A C 25363760 0.9289 deleterious KCNMA1 10 78943225 C T 25363760 DLG5 10 79569329 G A 25363760 MMRN2 10 88703271 C T 25363760 0.2049 neutral GLUD1 10 88819023 T C 25363760 0.9875 deleterious PAPSS2 10 89504934 G T 25363760 0.9919 deleterious ATAD1 10 89552422 T C 25363760 0.145 neutral PTEN 10 89711874 G A 25363760 HELLS 10 96322608 A G 25363760 0.0088 neutral CCNJ 10 97816903 G A 25363760 DNTT 10 98064396 C T 25363760 0.9657 deleterious RRP12 10 99160118 C T 25363760 0.0217 neutral DNMBP 10 101637066 C A 25363760 0.2215 neutral DNMBP 10 101731776 C T 25363760 0.9354 deleterious PKD2L1 10 102054351 G A 25363760 0.0743 neutral BTRC 10 103221816 G A 25363760 HPS6 10 103826022 C T 25363760 0.1339 neutral LDB1 10 103870671 TG T 25363760 CYP17A1 10 104595121 C T 25363760 0.2283 neutral CNNM2 10 104835900 G A 25363760 0.8962 deleterious NT5C2 10 104854118 C T 25363760 0.9226 deleterious SH3PXD2A 10 105363080 G C 25363760 0.0129 neutral SORCS3 10 107005369 C T 25363760 NRAP 10 115411623 G A 25363760 0.6316 deleterious HSPA12A 10 118434404 C T 25363760 0.9326 deleterious RAB11FIP2 10 119768600 T A 25363760 0.9575 deleterious EIF3A 10 120832478 C T 25363760 PLEKHA1 10 124183733 G T 25363760 0.0576 neutral MMP21 10 127461301 G A 25363760 0.2405 neutral C10orf90 10 128118361 A G 25363760 MKI67 10 129906031 T A 25363760 0.5591 deleterious TUBGCP2 10 135106567 T C 25363760 0.3687 neutral NLRP6 11 284614 C A 25363760 0.0048 neutral IFITM1 11 314978 C T 25363760 PHRF1 11 609438 G A 25363760 0.0002 neutral DEAF1 11 687917 C T 25363760 0.6759 deleterious DEAF1 11 687919 A G 25363760 0.7282 deleterious DEAF1 11 688377 G A 25363760 MUC6 11 1016042 C G 25363760 0.0247 neutral MUC2 11 1093562 C G 25363760 0.0016 neutral MUC2 11 1101090 G A 25363760 0.0016 neutral BRSK2 11 1471005 G C 25363760 LSP1 11 1901434 G A 25363760 TRPM5 11 2432681 G A 25363760 KCNQ1 11 2683228 C T 25363760 NUP98 11 3721958 G A 25363760 OR51A2 11 4976751 G GA 25363760 OR51I2 11 5474867 G A 25363760 0.0949 neutral OR52E8 11 5878672 C A 25363760 0.4165 neutral SMPD1 11 6412699 C A 25363760 0.142 neutral RRP8 11 6621480 G A 25363760 0.4242 neutral ZNF215 11 6977626 G A 25363760 0.0664 neutral PPFIBP2 11 7663553 T C 25363760 RIC3 11 8190433 T C 25363760 0.0381 neutral DENND5A 11 9163520 C T 25363760 0.9726 deleterious DENND5A 11 9172264 T C 25363760 0.8683 deleterious CTR9 11 10794110 C T 25363760 0.4977 neutral EIF4G2 11 10821664 T C 25363760 0.4374 neutral GALNTL4 11 11394085 C T 25363760 MICALCL 11 12371396 C G 25363760 0.4478 neutral TEAD1 11 12785933 C T 25363760 0.8201 deleterious FAR1 11 13733355 G A 25363760 INSC 11 15222445 AC A 25363760 PIK3C2A 11 17139181 T C 25363760 0.1356 neutral NUCB2 11 17333437 T C 25363760 0.5742 deleterious UEVLD 11 18591900 C T 25363760 0.0421 neutral MRGPRX2 11 19076997 C T 25363760 0.1367 neutral SLC6A5 11 20657880 C T 25363760 0.5125 deleterious SLC5A12 11 26725149 G A 25363760 LGR4 11 27390002 A G 25363760 KCNA4 11 30033315 C A 25363760 0.9195 deleterious CCDC73 11 32635980 A G 25363760 TCP11L1 11 33106655 C T 25363760 C11orf41 11 33581339 C T 25363760 EXT2 11 44219412 C T 25363760 0.9449 deleterious SLC35C1 11 45827567 C G 25363760 0.017 neutral ARFGAP2 11 47193288 G A 25363760 0.6856 deleterious KBTBD4 11 47595152 C T 25363760 0.9658 deleterious KBTBD4 11 47597183 T C 25363760 0.4963 deleterious OR5W2 11 55681687 C T 25363760 OR8H1 11 56058115 C T 25363760 0.0085 neutral APLNR 11 57003801 T C 25363760 CLP1 11 57428454 G T 25363760 0.8858 deleterious OR6Q1 11 57798755 C T 25363760 0.0271 neutral OR5B21 11 58275286 T C 25363760 0.9247 deleterious MS4A6A 11 59949115 G T 25363760 0.0632 neutral SYT7 11 61300522 C T 25363760 0.0843 neutral FEN1 11 61563334 G A 25363760 AHNAK 11 62297085 G A 25363760 0.913 deleterious AHNAK 11 62302541 G A 25363760 TUT1 11 62358947 A C 25363760 0.1207 neutral CHRM1 11 62677944 C A 25363760 0.7269 deleterious PLA2G16 11 63342519 C G 25363760 C11orf84 11 63585723 A G 25363760 0.0289 neutral MARK2 11 63666549 A C 25363760 0.9991 deleterious SCYL1 11 65306023 C T 25363760 0.698 deleterious LTBP3 11 65308738 CCTT C 25363760 SIPA1 11 65418056 C A 25363760 0.2863 neutral OVOL1 11 65562633 C CG 25363760 SF3B2 11 65824803 G C 25363760 0.9219 deleterious KLC2 11 66031216 G C 25363760 0.0257 neutral DPP3 11 66254814 G A 25363760 DPP3 11 66261048 G A 25363760 0.792 deleterious CCDC87 11 66358680 T G 25363760 0.1324 neutral RBM14 11 66392971 G A 25363760 0.9586 deleterious SPTBN2 11 66453370 C T 25363760 0.5145 deleterious RCE1 11 66611241 C T 25363760 0.3618 neutral SUV420H1 11 67925466 G A 25363760 SUV420H1 11 67941366 CAAAT C 25363760 LRP5 11 68174018 G A 25363760 0.8809 deleterious LRP5 11 68201226 G A 25363760 0.5317 deleterious NUMA1 11 71726076 C T 25363760 0.4617 neutral NUMA1 11 71727496 G T 25363760 0.4453 neutral C2CD3 11 73809244 T C 25363760 0.7639 deleterious SLCO2B1 11 74904279 G A 25363760 C11orf30 11 76234322 T A 25363760 RSF1 11 77458112 A G 25363760 0.8782 deleterious CCDC90B 11 82989819 T C 25363760 0.0566 neutral DLG2 11 83497765 G C 25363760 0.0032 neutral FAT3 11 92258103 A G 25363760 0.8015 deleterious KIAA1731 11 93412615 G A 25363760 HEPHL1 11 93796879 C G 25363760 0.9439 deleterious PIWIL4 11 94340642 A T 25363760 0.9424 deleterious BIRC3 11 102201741 G T 25363760 NPAT 11 108043794 T G 25363760 EXPH5 11 108381396 C A 25363760 0.0725 neutral PPP2R1B 11 111631749 C A 25363760 NCAM1 11 113114295 G C 25363760 ANKK1 11 113270025 G A 25363760 0.2213 neutral FAM55D 11 114441796 T G 25363760 RNF214 11 117109607 G A 25363760 0.0007 neutral RNF214 11 117152397 C T 25363760 0.3407 neutral MLL 11 118344818 T A 25363760 0.1040 neutral MLL 11 118360578 AC A 25363760 HMBS 11 118959833 C T 25363760 0.1325 neutral OAF 11 120096386 G C 25363760 0.9818 deleterious GRIK4 11 120690516 G T 25363760 0.9515 deleterious TECTA 11 120996340 C T 25363760 TECTA 11 120998556 G A 25363760 0.412 neutral PKNOX2 11 125281736 G A 25363760 0.8191 deleterious PUS3 11 125765418 C G 25363760 0.8261 deleterious CDON 11 125831706 G A 25363760 0.5414 deleterious CDON 11 125864185 C T 25363760 0.5414 deleterious CDON 11 125871738 T C 25363760 KIRREL3 11 126333180 C T 25363760 0.8227 deleterious ETS1 11 128442976 G A 25363760 0.0175 neutral ARHGAP32 11 128839782 G A 25363760 0.704 deleterious ST14 11 130069939 C G 25363760 0.0241 neutral SLC6A12 12 308075 A C 25363760 0.9963 deleterious SLC6A13 12 346455 G A 25363760 0.9947 deleterious FOXM1 12 2968180 G A 25363760 0.472 deleterious PTMS 12 6879340 G T 25363760 CD163L1 12 7510021 A AG 25363760 CD163L1 12 7551094 T C 25363760 0.8797 deleterious FAM90A1 12 8374721 C T 25363760 A2M 12 9220801 C T 25363760 MANSC1 12 12483027 T C 25363760 MANSC1 12 12483385 G A 25363760 0.0247 neutral SLCO1B3 12 21028412 G A 25363760 SLCO1B1 12 21353467 C G 25363760 0.0261 neutral SLCO1B1 12 21353475 A T 25363760 0.919 deleterious MED21 12 27180296 T G 25363760 0.8993 deleterious C12orf35 12 32134096 T C 25363760 PDZRN4 12 41967048 G A 25363760 0.0006 neutral TWF1 12 44190856 G A 25363760 0.9981 deleterious DBX2 12 45410229 G C 25363760 RAPGEF3 12 48131375 C CG 25363760 C12orf41 12 49062942 G A 25363760 NCKAP5L 12 50188994 G A 25363760 DIP2B 12 51069223 T A 25363760 0.9494 deleterious KRT81 12 52681414 C T 25363760 0.6273 deleterious KRT82 12 52799948 G A 25363760 KRT75 12 52825828 G A 25363760 0.8922 deleterious KRT71 12 52942001 G A 25363760 0.6891 deleterious TENC1 12 53454931 G A 25363760 ITGB7 12 53586569 G A 25363760 0.27 neutral ITGA5 12 54793722 C A 25363760 PDE1B 12 54966430 G A 25363760 0.8932 deleterious ESYT1 12 56522182 C T 25363760 0.0806 neutral SMARCC2 12 56566368 C A 25363760 SLC39A5 12 56629024 C T 25363760 0.4554 neutral STAT2 12 56744934 G A 25363760 0.1016 neutral TIMELESS 12 56817589 G A 25363760 0.2258 neutral LRP1 12 57599250 G A 25363760 0.2502 neutral KIF5A 12 57970127 A G 25363760 0.4998 deleterious AGAP2 12 58125237 C T 25363760 0.1263 neutral CYP27B1 12 58157512 C T 25363760 0.9976 deleterious DPY19L2 12 64062118 G A 25363760 0.3124 neutral SRGAP1 12 64519821 C T 25363760 TBK1 12 64890764 C T 25363760 0.3052 neutral RASSF3 12 65082212 CGTT C 25363760 LEMD3 12 65639657 A C 25363760 0.6219 deleterious MDM2 12 69210702 A C 25363760 PTPRB 12 70946590 C T 25363760 0.9454 deleterious PTPRR 12 71092102 T A 25363760 ZFC3H1 12 72004328 T C 25363760 SYT1 12 79689961 C G 25363760 0.8781 deleterious UBE2N 12 93804590 C T 25363760 0.5243 deleterious METAP2 12 95867964 T G 25363760 SCYL2 12 100709337 G A 25363760 0.9968 deleterious GAS2L3 12 101011562 T A 25363760 SLC5A8 12 101584304 C T 25363760 0.4639 neutral GNPTAB 12 102164185 T C 25363760 0.5649 deleterious CCDC53 12 102437956 A G 25363760 0.4467 neutral RFX4 12 107126711 G A 25363760 0.4384 neutral BTBD11 12 107937726 C T 25363760 0.7638 deleterious PRDM4 12 108145614 A G 25363760 0.9769 deleterious FICD 12 108912728 G A 25363760 0.03 neutral SSH1 12 109182009 C T 25363760 0.0788 neutral ACACB 12 109644616 C T 25363760 MMAB 12 109996929 C T 25363760 0.4564 deleterious MVK 12 110023830 G T 25363760 0.8702 deleterious C12orf34 12 110206986 C T 25363760 GIT2 12 110397718 G T 25363760 0.9617 deleterious GIT2 12 110397719 C A 25363760 ATP2A2 12 110778685 C T 25363760 ATP2A2 12 110780170 C T 25363760 GPN3 12 110893672 T C 25363760 0.627 deleterious CUX2 12 111748483 C T 25363760 ACAD10 12 112187030 G T 25363760 0.5747 deleterious C12orf51 12 112600303 C T 25363760 C12orf51 12 112607491 A C 25363760 C12orf51 12 112614406 G A 25363760 OAS3 12 113405230 G T 25363760 DTX1 12 113515286 G A 25363760 0.9959 deleterious RASAL1 12 113537769 G A 25363760 RASAL1 12 113544958 C G 25363760 0.0086 neutral TPCN1 12 113724837 G A 25363760 LRRC43 12 122685163 A G 25363760 0.0111 neutral LRRC43 12 122685164 A G 25363760 0.0144 neutral DENR 12 123246737 G A 25363760 0.991 deleterious PITPNM2 12 123470840 G A 25363760 0.2582 neutral PITPNM2 12 123489035 C T 25363760 SBNO1 12 123798209 T C 25363760 0.092 neutral TCTN2 12 124191337 C T 25363760 0.1115 neutral DHX37 12 125465134 T C 25363760 0.1732 neutral TMEM132B 12 126139127 C T 25363760 RIMBP2 12 130935769 CG C 25363760 GPR133 12 131590314 C T 25363760 ULK1 12 132400965 C T 25363760 0.2474 neutral EP400 12 132466931 A ATCCC 25363760 EP400 12 132498194 C T 25363760 MTMR6 13 25823414 C A 25363760 0.1404 neutral RNF6 13 26788664 C T 25363760 0.2237 neutral ATP5EP2 13 28519532 G A 25363760 FRY 13 32698445 T A 25363760 0.1173 neutral FRY 13 32761742 T C 25363760 BRCA2 13 32915264 G A 25363760 0.0395 neutral BRCA2 13 32929306 G A 25363760 0.4272 neutral BRCA2 13 32968952 G A 25363760 0.9696 deleterious NBEA 13 36180647 G A 25363760 0.2585 neutral TRPC4 13 38266412 C T 25363760 0.7431 deleterious FREM2 13 39264446 C T 25363760 0.9223 deleterious KIAA0564 13 42293799 A G 25363760 MED4 13 48657525 T C 25363760 0.8739 deleterious EBPL 13 50235260 G C 25363760 UTP14C 13 52603682 A G 25363760 0.7414 deleterious SUGT1 13 53261963 A C 25363760 0.7744 deleterious PCDH17 13 58240602 A G 25363760 0.9082 deleterious DIS3 13 73346895 T C 25363760 0.5246 deleterious TBC1D4 13 75930292 G A 25363760 MYCBP2 13 77700568 A G 25363760 0.0089 neutral MYCBP2 13 77760058 G C 25363760 GPC5 13 92560202 G A 25363760 0.1592 neutral UGGT2 13 96536926 C T 25363760 0.9925 deleterious TPP2 13 103288643 G T 25363760 0.9587 deleterious KDELC1 13 103443708 T C 25363760 0.0902 neutral ATP11A 13 113530101 A G 25363760 0.0246 neutral F7 13 113773238 G A 25363760 ADPRHL1 13 114107662 T C 25363760 0.0105 neutral APEX1 14 20925282 C G 25363760 0.2164 neutral CHD8 14 21870652 C T 25363760 0.9966 deleterious CHD8 14 21876700 A G 25363760 0.9997 deleterious OXA1L 14 23240676 T C 25363760 0.8789 deleterious MYH6 14 23856995 G T 25363760 TGM1 14 24724606 G A 25363760 0.955 deleterious TGM1 14 24731032 C CG 25363760 NYNRIN 14 24885730 G A 25363760 0.1765 neutral FOXG1 14 29237624 C T 25363760 0.9619 deleterious FOXG1 14 29237631 C G 25363760 FOXG1 14 29237726 C A 25363760 0.2997 neutral PRKD1 14 30102082 T C 25363760 0.8391 deleterious STRN3 14 31425374 C G 25363760 0.0168 neutral ARHGAP5 14 32560858 A C 25363760 0.9322 deleterious NPAS3 14 34269619 C G 25363760 INSM2 14 36005002 G T 25363760 0.1404 neutral RALGAPA1 14 36133921 T G 25363760 0.846 deleterious SEC23A 14 39514393 C T 25363760 0.5806 deleterious GEMIN2 14 39605657 C T 25363760 0.1321 neutral CTAGE5 14 39777734 A G 25363760 0.0619 neutral LRFN5 14 42356586 G A 25363760 0.9569 deleterious PRPF39 14 45571806 G A 25363760 MDGA2 14 47311217 C T 25363760 0.0839 neutral MAP4K5 14 50912820 T C 25363760 0.0128 neutral PYGL 14 51410920 A C 25363760 0.5125 deleterious FRMD6 14 52182165 T C 25363760 NID2 14 52477726 C T 25363760 0.0251 neutral TXNDC16 14 52955112 A C 25363760 0.013 neutral WDHD1 14 55477154 A G 25363760 0.9898 deleterious EXOC5 14 57676376 T C 25363760 0.9059 deleterious DACT1 14 59113803 A T 25363760 0.9054 deleterious SYNE2 14 64532269 G A 25363760 SPTB 14 65253441 T C 25363760 0.6028 deleterious ZFYVE26 14 68242625 C T 25363760 0.9324 deleterious SIPA1L1 14 72054914 C T 25363760 NUMB 14 73743597 G A 25363760 0.4204 neutral ABCD4 14 74759259 C T 25363760 YLPM1 14 75266198 C T 25363760 0.8923 deleterious NRXN3 14 80158587 G A 25363760 0.9857 deleterious SEL1L 14 81952041 T C 25363760 GALC 14 88442767 G A 25363760 ZC3H14 14 89034439 C T 25363760 EML5 14 89154652 T C 25363760 0.7621 deleterious FBLN5 14 92403413 G C 25363760 0.3069 neutral CPSF2 14 92600459 A G 25363760 0.9987 deleterious RIN3 14 93118106 A G 25363760 0.2398 neutral C14orf109 14 93653012 C T 25363760 PPP4R4 14 94674843 C T 25363760 DICER1 14 95571439 C T 25363760 0.8921 deleterious TCL1B 14 96152831 A G 25363760 DYNC1H1 14 102453029 G T 25363760 0.7834 deleterious DYNC1H1 14 102478291 C T 25363760 0.9779 deleterious DYNC1H1 14 102483206 A G 25363760 0.9779 deleterious DYNC1H1 14 102510723 A T 25363760 0.0913 neutral ZNF839 14 102808176 A C 25363760 0.022 neutral CDC42BPB 14 103404494 C T 25363760 0.1053 neutral TNFAIP2 14 103598072 G A 25363760 KLC1 14 104142064 C CG 25363760 PPP1R13B 14 104205312 C T 25363760 0.9109 deleterious ADSSL1 14 105212710 G C 25363760 0.0536 neutral PLD4 14 105398680 G T 25363760 0.0342 neutral AHNAK2 14 105410213 C T 25363760 0.0596 neutral AHNAK2 14 105411605 C G 25363760 0.013 neutral BTBD6 14 105716364 CAA C 25363760 GABRB3 15 26793067 GA G 25363760 HERC2 15 28377973 C T 25363760 KLF13 15 31664373 G A 25363760 RYR3 15 33955026 A G 25363760 AVEN 15 34159944 A C 25363760 0.1815 neutral C15orf55 15 34647243 C G 25363760 LPCAT4 15 34651913 G A 25363760 0.5125 deleterious AQR 15 35230988 G A 25363760 0.5838 deleterious ATPBD4 15 35742921 T C 25363760 FAM98B 15 38766428 T C 25363760 0.9511 deleterious CASC5 15 40916097 C T 25363760 0.0143 neutral FAM82A2 15 41044271 A T 25363760 RTF1 15 41745214 A C 25363760 0.4068 neutral LTK 15 41796800 C T 25363760 0.2065 neutral TYRO3 15 41853769 G A 25363760 0.1123 neutral SPTBN5 15 42168347 G C 25363760 0.0628 neutral ZFP106 15 42717184 G A 25363760 TP53BP1 15 43705517 C T 25363760 0.0842 neutral DUOX1 15 45448101 C G 25363760 0.8749 deleterious DUOX1 15 45448118 C G 25363760 FBN1 15 48720623 C T 25363760 0.978 deleterious COPS2 15 49429353 C T 25363760 USP8 15 50769642 A G 25363760 AP4E1 15 51291288 G T 25363760 0.0517 neutral LEO1 15 52242140 G A 25363760 GNB5 15 52427874 T C 25363760 0.0038 neutral MYO5A 15 52718114 A C 25363760 0.4875 neutral RFX7 15 56387330 G A 25363760 0.148 neutral RFX7 15 56387798 C CT 25363760 GCOM1 15 57913816 C T 25363760 0.6953 deleterious FAM63B 15 59064294 A G 25363760 0.987 deleterious RORA 15 60792113 C T 25363760 0.2533 neutral TLN2 15 63089511 G A 25363760 TRIP4 15 64692977 T G 25363760 PIF1 15 65110238 G A 25363760 CILP 15 65496832 G A 25363760 SLC24A1 15 65918236 C G 25363760 0.4126 neutral MEGF11 15 66210324 A G 25363760 0.0465 neutral MAP2K1 15 66729163 C T 25363760 0.9638 deleterious MAP2K5 15 67985878 C T 25363760 0.2061 neutral PIAS1 15 68378807 G A 25363760 0.9931 deleterious UACA 15 70957107 T C 25363760 0.0636 neutral CYP1A2 15 75047147 C T 25363760 SIN3A 15 75684849 G A 25363760 0.7894 deleterious NRG4 15 76248271 A C 25363760 ADAMTS7 15 79058739 G A 25363760 0.0603 neutral ARNT2 15 80806697 A G 25363760 ALPK3 15 85401772 A G 25363760 0.0135 neutral SLC28A1 15 85476378 C T 25363760 PDE8A 15 85610406 T A 25363760 HAPLN3 15 89424873 A AG 25363760 RHCG 15 90026334 G A 25363760 ZNF774 15 90904162 A G 25363760 0.9342 deleterious CRTC3 15 91150689 G T 25363760 0.0862 neutral CHD2 15 93518170 A G 25363760 0.9766 deleterious CHD2 15 93524620 G A 25363760 0.8988 deleterious CHD2 15 93536154 G A 25363760 0.7143 deleterious ADAMTS17 15 100636667 G A 25363760 FBXL16 16 745595 T C 25363760 0.1255 neutral RPL3L 16 1997014 G A 25363760 NTHL1 16 2094778 C T 25363760 PKD1 16 2152577 C T 25363760 TRAF7 16 2226080 C T 25363760 0.6017 deleterious CASKIN1 16 2235199 A C 25363760 SRRM2 16 2806450 C T 25363760 0.9275 deleterious SRRM2 16 2813308 CAAAG C 25363760 SRRM2 16 2815676 C A 25363760 0.2281 neutral SRRM2 16 2817038 C G 25363760 0.9167 deleterious PRSS21 16 2871093 G A 25363760 0.0049 neutral TFAP4 16 4312614 G A 25363760 0.984 deleterious MGRN1 16 4702029 CAA C 25363760 UBN1 16 4925419 C T 25363760 0.7467 deleterious PPL 16 4945323 C T 25363760 0.9582 deleterious USP7 16 9002226 T C 25363760 0.4245 neutral CPPED1 16 12875152 T G 25363760 0.716 deleterious MKL2 16 14334157 C T 25363760 0.1611 neutral PARN 16 14723490 C T 25363760 0.6256 deleterious KIAA0430 16 15719503 C A 25363760 0.2252 neutral MYH11 16 15844149 G A 25363760 0.6527 deleterious XYLT1 16 17228330 C T 25363760 0.9279 deleterious TMC7 16 19020639 C T 25363760 GDE1 16 19522205 G C 25363760 0.3857 neutral DNAH3 16 20994072 A G 25363760 SCNN1G 16 23224460 G A 25363760 0.2753 deleterious ERN2 16 23718354 C T 25363760 0.7685 deleterious TNRC6A 16 24835108 G T 25363760 0.998 deleterious GTF3C1 16 27517395 G T 25363760 0.8409 deleterious IL27 16 28510980 G A 25363760 NFATC2IP 16 28967316 C A 25363760 0.2086 neutral NFATC2IP 16 28970388 G A 25363760 MAPK3 16 30128162 G A 25363760 0.0055 neutral MAPK3 16 30128549 C T 25363760 0.9868 deleterious ITGAL 16 30529146 G A 25363760 0.3204 neutral SRCAP 16 30747939 G C 25363760 0.2072 neutral AC135050.1 16 31072989 C T 25363760 VPS35 16 46716048 T C 25363760 0.4633 deleterious MYLK3 16 46766161 C A 25363760 0.0428 neutral ABCC12 16 48174756 T C 25363760 0.0738 neutral ABCC12 16 48175156 C T 25363760 ZNF423 16 49670329 G A 25363760 0.2223 neutral ZNF423 16 49671585 T C 25363760 0.6674 deleterious PAPD5 16 50263085 G A 25363760 0.1684 neutral RBL2 16 53487404 C T 25363760 SLC12A3 16 56920988 G A 25363760 0.1077 neutral NDRG4 16 58538527 G A 25363760 0.9998 deleterious NDRG4 16 58540303 G A 25363760 0.2194 neutral DYNC1LI2 16 66769989 C A 25363760 0.9772 deleterious C16orf70 16 67168109 C T 25363760 ZDHHC1 16 67432775 G A 25363760 RLTPR 16 67685167 C T 25363760 LCAT 16 67973973 C G 25363760 0.8504 deleterious DPEP2 16 68026861 G A 25363760 HAS3 16 69148665 G A 25363760 CYB5B 16 69496335 G A 25363760 0.1171 neutral MARVELD3 16 71668525 C G 25363760 0.099 neutral AP1G1 16 71780536 C T 25363760 0.9968 deleterious ZNF821 16 71894143 C T 25363760 ZFHX3 16 72991675 G A 25363760 WWOX 16 79245541 G A 25363760 0.4867 neutral SLC38A8 16 84070481 C A 25363760 0.9665 deleterious KIAA1609 16 84514140 G A 25363760 ZDHHC7 16 85010808 T C 25363760 0.0044 neutral KIAA0182 16 85682214 T C 25363760 CA5A 16 87935559 G C 25363760 0.5125 deleterious ZFPM1 16 88555458 G A 25363760 ZFPM1 16 88594582 C T 25363760 ZFPM1 16 88594633 C T 25363760 IL17C 16 88705646 C T 25363760 ZNF778 16 89293712 G C 25363760 0.0421 neutral CHMP1A 16 89715851 G A 25363760 0.2603 neutral FANCA 16 89845355 C G 25363760 0.9802 deleterious MYO1C 17 1380804 G C 25363760 0.4755 neutral WDR81 17 1636104 G A 25363760 0.6893 deleterious WDR81 17 1636946 G A 25363760 0.0494 neutral WDR81 17 1637187 C G 25363760 0.9679 deleterious RTN4RL1 17 1840824 C T 25363760 0.6771 deleterious METTL16 17 2371131 A G 25363760 0.9988 deleterious RAP1GAP2 17 2901580 G A 25363760 P2RX1 17 3801158 C T 25363760 0.0827 neutral RNF167 17 4847898 A G 25363760 0.9433 deleterious RABEP1 17 5276712 A G 25363760 0.3159 neutral RABEP1 17 5284689 C T 25363760 NLRP1 17 5456733 C T 25363760 0.0065 neutral NLRP1 17 5486032 C T 25363760 0.0452 neutral NLGN2 17 7319134 C T 25363760 0.9841 deleterious SLC35G6 17 7416351 T A 25363760 DNAH2 17 7660448 G A 25363760 DNAH2 17 7671509 A T 25363760 0.0061 neutral KDM6B 17 7755277 G A 25363760 0.4567 neutral CHD3 17 7811315 T C 25363760 ALOX12B 17 7983087 C T 25363760 PER1 17 8044457 T C 25363760 0.4499 neutral VAMP2 17 8065581 C A 25363760 0.5468 deleterious CTC1 17 8151329 G C 25363760 0.8918 deleterious PFAS 17 8166940 A C 25363760 0.4875 neutral ARHGAP44 17 12887971 C A 25363760 TEKT3 17 15207450 C G 25363760 0.7957 deleterious TEKT3 17 15212030 G A 25363760 0.9836 deleterious RAI1 17 17697926 C T 25363760 0.8161 deleterious RAI1 17 17698609 G A 25363760 0.4749 deleterious LRRC48 17 17880957 T C 25363760 MYO15A 17 18047280 A G 25363760 0.8078 deleterious FLII 17 18151881 G C 25363760 0.0393 neutral FLII 17 18157933 G A 25363760 TBC1D28 17 18541660 T A 25363760 0.3298 neutral EPN2 17 19213285 C A 25363760 0.9318 deleterious SARM1 17 26722930 G A 25363760 0.0189 neutral SARM1 17 26722931 T A 25363760 0.0075 neutral SARM1 17 26722933 A T 25363760 0.0189 neutral TAOK1 17 27802725 AAAG A 25363760 ANKRD13B 17 27938657 A T 25363760 0.7033 deleterious SLC6A4 17 28530282 T C 25363760 0.037 neutral SLC6A4 17 28544289 C G 25363760 UTP6 17 30211462 G A 25363760 MYO1D 17 31039179 G T 25363760 0.9238 deleterious CCT6B 17 33269892 G A 25363760 RAD51D 17 33446571 C G 25363760 0.6082 deleterious UNC45B 17 33481726 C T 25363760 0.6973 deleterious UNC45B 17 33495251 C T 25363760 GGNBP2 17 34943466 C T 25363760 PIP4K2B 17 36955630 G C 25363760 STARD3 17 37815024 C T 25363760 PSMD3 17 38146011 C T 25363760 0.9341 deleterious SMARCE1 17 38801873 T C 25363760 KRT25 17 38910124 C A 25363760 0.4076 neutral KRTAP9-3 17 39389177 A G 25363760 0.0902 neutral KRT34 17 39535950 G A 25363760 0.8406 deleterious KRT34 17 39538425 C T 25363760 0.5137 deleterious HAP1 17 39881349 T C 25363760 JUP 17 39919351 G GGCGCAGA 25363760 ACLY 17 40025344 A G 25363760 0.9647 deleterious NKIRAS2 17 40175841 C G 25363760 0.9995 deleterious KAT2A 17 40269445 C T 25363760 0.981 deleterious HSPB9 17 40275291 A G 25363760 STAT5A 17 40441466 G T 25363760 0.9908 deleterious TUBG1 17 40765890 C G 25363760 0.969 deleterious ETV4 17 41610239 A G 25363760 0.1069 neutral DUSP3 17 41847180 G A 25363760 0.8976 deleterious ASB16 17 42255667 G A 25363760 0.2825 neutral SLC4A1 17 42340237 C T 25363760 GRN 17 42428483 A G 25363760 0.0852 neutral GRN 17 42429110 G A 25363760 0.0061 neutral DBF4B 17 42828130 C T 25363760 KIF18B 17 43006344 G A 25363760 C17orf46 17 43333387 C T 25363760 C17orf46 17 43333388 A G 25363760 WNT9B 17 44950046 G A 25363760 0.6554 deleterious C17orf57 17 45369819 C T 25363760 SCRN2 17 45915213 C T 25363760 SCRN2 17 45915703 T C 25363760 0.0723 neutral HOXB7 17 46685259 C A 25363760 0.532 deleterious DLX4 17 48050479 G C 25363760 0.3055 neutral CA10 17 49713356 G A 25363760 AKAP1 17 55189193 G A 25363760 0.8067 deleterious VEZF1 17 56060162 T G 25363760 0.9898 deleterious MPO 17 56353059 G T 25363760 0.9528 deleterious TRIM37 17 57105783 T C 25363760 0.2991 neutral TRIM37 17 57119260 C T 25363760 CLTC 17 57758401 T C 25363760 RPS6KB1 17 58022775 A G 25363760 TBX4 17 59544933 C T 25363760 0.9874 deleterious TBX4 17 59560616 C T 25363760 SCN4A 17 62018938 G A 25363760 TEX2 17 62290197 C T 25363760 0.4111 neutral DDX5 17 62499353 C G 25363760 0.6751 deleterious PRKCA 17 64683232 G A 25363760 0.1093 neutral MAP2K6 17 67513027 A T 25363760 0.9491 deleterious MAP2K6 17 67513031 C T 25363760 0.5143 deleterious COG1 17 71192877 G C 25363760 0.1374 neutral KIF19 17 72346879 A G 25363760 OTOP3 17 72943142 G A 25363760 0.0331 neutral C17orf28 17 72956159 C A 25363760 KIAA0195 17 73487233 C T 25363760 LLGL2 17 73539565 C T 25363760 LLGL2 17 73568032 G A 25363760 0.9951 deleterious EVPL 17 74013881 C T 25363760 0.655 deleterious SEC14L1 17 75201419 G A 25363760 0.4015 neutral DNAH17 17 76521156 T A 25363760 LGALS3BP 17 76967677 T C 25363760 0.3006 neutral TBC1D16 17 77922739 G A 25363760 CCDC40 17 78013636 G T 25363760 0.1602 neutral BAIAP2 17 79060248 G A 25363760 ASPSCR1 17 79954601 A T 25363760 0.4791 deleterious FASN 17 80046097 T C 25363760 0.5036 deleterious FOXK2 17 80543909 C T 25363760 0.9751 deleterious FOXK2 17 80544976 G A 25363760 SMCHD1 18 2666192 A G 25363760 0.2896 neutral SMCHD1 18 2743776 A G 25363760 0.0848 neutral LAMA1 18 7032103 C T 25363760 0.0657 neutral PTPRM 18 8244097 G A 25363760 0.9768 deleterious PTPRM 18 8376088 T C 25363760 CCDC165 18 8783786 G A 25363760 CCDC165 18 8784008 C T 25363760 RALBP1 18 9533755 C T 25363760 RNMT 18 13746286 A G 25363760 0.2884 neutral ESCO1 18 19154007 A G 25363760 DSG2 18 29099844 G A 25363760 0.4636 deleterious FAM59A 18 29867104 G A 25363760 KLHL14 18 30349680 T C 25363760 0.9533 deleterious KLHL14 18 30349686 C A 25363760 0.9914 deleterious ASXL3 18 31322918 C T 25363760 ASXL3 18 31323981 C CT 25363760 SETBP1 18 42531877 G A 25363760 0.9873 deleterious MYO5B 18 47506898 G A 25363760 MAPK4 18 48190687 C T 25363760 0.0278 neutral CCDC68 18 52585148 G A 25363760 0.5844 deleterious TCF4 18 52895538 AC A 25363760 ATP8B1 18 55371870 C T 25363760 0.209 neutral GZMM 19 548659 C G 25363760 0.8659 deleterious TCF3 19 1619177 G GT 25363760 C19orf34 19 1953406 C T 25363760 C19orf34 19 1953503 A G 25363760 BTBD2 19 1986556 G A 25363760 JSRP1 19 2252771 G A 25363760 0.3356 neutral GADD45B 19 2477173 T C 25363760 0.9827 deleterious C19orf28 19 3547469 G A 25363760 ZFR2 19 3834874 G A 25363760 0.0304 neutral ITGB1BP3 19 3938710 G A 25363760 EEF2 19 3980675 T C 25363760 0.7994 deleterious FSD1 19 4318470 G A 25363760 STAP2 19 4334006 G A 25363760 PLIN4 19 4510966 G A 25363760 PLIN4 19 4512088 G A 25363760 KDM4B 19 5110672 G A 25363760 0.4435 deleterious KDM4B 19 5111518 C T 25363760 KDM4B 19 5135437 C T 25363760 LONP1 19 5707116 C A 25363760 0.0266 neutral CAPS 19 5914616 C T 25363760 RFX2 19 6013032 C T 25363760 0.058 neutral PSPN 19 6375788 C T 25363760 0.1967 neutral C3 19 6678390 G C 25363760 0.8364 deleterious ZNF557 19 7083553 C A 25363760 0.0002 neutral KIAA1543 19 7675609 C T 25363760 FBN3 19 8176973 T C 25363760 CD320 19 8367787 T C 25363760 0.017 neutral PRAM1 19 8555989 C T 25363760 MYO1F 19 8618092 C T 25363760 ZNF560 19 9577658 G A 25363760 C19orf66 19 10202009 G A 25363760 PPAN 19 10220615 C T 25363760 0.1914 neutral P2RY11 19 10224733 C T 25363760 MRPL4 19 10363234 G A 25363760 QTRT1 19 10812917 C T 25363760 SMARCA4 19 11096052 C T 25363760 0.1163 neutral SMARCA4 19 11097060 T C 25363760 0.5145 deleterious KANK2 19 11303859 C T 25363760 AC024575.1 19 11474442 C T 25363760 CNN1 19 11658697 A G 25363760 0.0176 neutral ZNF441 19 11890900 G C 25363760 0.0114 neutral ZNF443 19 12542197 A C 25363760 TNPO2 19 12816177 G A 25363760 TRMT1 19 13226581 G T 25363760 LPHN1 19 14271102 C G 25363760 LPHN1 19 14273591 T C 25363760 NOTCH3 19 15276256 G A 25363760 0.9953 deleterious WIZ 19 15536443 C T 25363760 MYO9B 19 17306176 C T 25363760 0.8391 deleterious MYO9B 19 17311567 C CG 25363760 PLVAP 19 17463179 T G 25363760 UNC13A 19 17743591 G T 25363760 0.2314 neutral B3GNT3 19 17918722 G T 25363760 0.1948 neutral SLC5A5 19 17983447 C T 25363760 0.9995 deleterious MAST3 19 18232563 C T 25363760 0.9554 deleterious UPF1 19 18958640 C G 25363760 UPF1 19 18965942 G A 25363760 0.9763 deleterious UPF1 19 18976921 G A 25363760 NCAN 19 19338832 C G 25363760 0.0066 neutral NCAN 19 19359533 T C 25363760 0.6974 deleterious SUGP1 19 19390056 G A 25363760 MAU2 19 19460025 C T 25363760 0.8612 deleterious DPY19L3 19 32971365 G A 25363760 0.3217 neutral ANKRD27 19 33135343 A G 25363760 0.9771 deleterious CD22 19 35837104 C T 25363760 0.0149 neutral ETV2 19 36133597 A T 25363760 ZNF382 19 37101604 G T 25363760 0.0188 neutral ZNF568 19 37441275 T C 25363760 0.0001 neutral ZNF420 19 37618055 G T 25363760 0.056 neutral RYR1 19 38956904 G A 25363760 0.6498 deleterious CAPN12 19 39229252 C T 25363760 0.5439 neutral LRFN1 19 39805110 G A 25363760 FCGBP 19 40363870 C T 25363760 ZNF546 19 40520471 C T 25363760 0.007 neutral SHKBP1 19 41083341 C T 25363760 EGLN2 19 41306892 C A 25363760 0.2944 neutral CYP2A13 19 41594888 G A 25363760 0.9042 deleterious AXL 19 41759516 C T 25363760 LYPD4 19 42343030 TC T 25363760 CD79A 19 42384953 G T 25363760 0.1988 neutral ARHGEF1 19 42410172 G A 25363760 0.0123 neutral ATP1A3 19 42489176 A G 25363760 0.9848 deleterious GRIK5 19 42507510 T C 25363760 0.2698 neutral ZNF574 19 42583760 C T 25363760 ETHE1 19 44015690 T C 25363760 0.9987 deleterious ZNF576 19 44103310 C T 25363760 0.2629 neutral ZNF155 19 44500603 C T 25363760 ZNF223 19 44571385 C T 25363760 ZNF233 19 44778797 T A 25363760 0.0071 neutral ZNF233 19 44778799 G A 25363760 ZNF285 19 44832737 C T 25363760 DMPK 19 46280586 C A 25363760 0.0806 neutral MYPOP 19 46394531 G T 25363760 PRKD2 19 47207621 G A 25363760 0.1716 neutral STRN4 19 47242092 C G 25363760 MEIS3 19 47920081 T C 25363760 0.3684 neutral ELSPBP1 19 48519183 G A 25363760 0.1511 neutral TMEM143 19 48866572 C T 25363760 BAX 19 49459467 C T 25363760 MED25 19 50333455 C T 25363760 0.1022 neutral ZNF766 19 52793889 G A 25363760 0.0003 neutral ZNF813 19 53994750 A C 25363760 0.0007 neutral PRKCG 19 54395806 G T 25363760 0.5091 deleterious MBOAT7 19 54687558 C T 25363760 LILRA3 19 54803750 G T 25363760 0.0391 neutral LILRA4 19 54844975 G A 25363760 NLRP7 19 55452898 G T 25363760 0.5906 deleterious BRSK1 19 55820037 A G 25363760 0.8665 deleterious ZNF628 19 55995110 A G 25363760 NLRP5 19 56539717 C G 25363760 0.0249 neutral CHMP2A 19 59063080 G C 25363760 0.1403 neutral SIRPB2 20 1459226 AC A 25363760 SLC4A11 20 3218211 T C 25363760 0.0068 neutral C20orf194 20 3236780 TG T 25363760 ATRN 20 3575148 G A 25363760 SIGLEC1 20 3673614 G A 25363760 0.7159 deleterious SIGLEC1 20 3675396 G A 25363760 0.3256 neutral PANK2 20 3891360 A G 25363760 0.5761 deleterious PRNP 20 4680118 T C 25363760 0.0093 neutral FERMT1 20 6064737 G C 25363760 0.7337 deleterious ANKRD5 20 10019040 C G 25363760 FLRT3 20 14306852 G A 25363760 0.7741 deleterious PCSK2 20 17462427 C T 25363760 RRBP1 20 17602158 G A 25363760 0.1335 neutral SLC24A3 20 19701743 G A 25363760 0.9904 deleterious CST9 20 23584346 A G 25363760 0.3312 neutral TPX2 20 30366759 T C 25363760 DUSP15 20 30450489 G A 25363760 0.8054 deleterious HCK 20 30689268 T C 25363760 TM9SF4 20 30738473 T A 25363760 0.9985 deleterious ASXL1 20 31021466 C T 25363760 0.333 neutral RALY 20 32664866 G A 25363760 0.0016 neutral MYH7B 20 33578059 G A 25363760 RBM12 20 34240767 C G 25363760 NDRG3 20 35350135 C T 25363760 0.4418 neutral RALGAPB 20 37137843 CAT C 25363760 RALGAPB 20 37186988 G A 25363760 LPIN3 20 39977381 C A 25363760 SRSF6 20 42089673 A T 25363760 0.2736 neutral C20orf111 20 42825855 TGA T 25363760 KCNS1 20 43723695 C T 25363760 0.7426 deleterious SEMG2 20 43851703 G A 25363760 0.0287 neutral MATN4 20 43926652 G A 25363760 ZSWIM1 20 44511799 G A 25363760 0.1524 neutral SLC35C2 20 44983771 G A 25363760 0.9369 deleterious FAM65C 20 49211992 TC T 25363760 ADNP 20 49508382 CCTCA C 25363760 ADNP 20 49510602 CTCGGGCAT C 25363760 ATP9A 20 50221501 C A 25363760 TSHZ2 20 51872052 C T 25363760 TAF4 20 60578326 AG A 25363760 RP4-697K14.7 20 62198612 G A 25363760 ZBTB46 20 62421745 G A 25363760 PRPF6 20 62626801 C T 25363760 0.9876 deleterious PRPF6 20 62642793 C T 25363760 HSPA13 21 15753820 G A 25363760 SAMSN1 21 15893541 C T 25363760 0.7106 deleterious TMPRSS15 21 19642312 C T 25363760 0.0413 neutral GRIK1 21 30949318 G A 25363760 0.1137 neutral MIS18A 21 33651218 G A 25363760 MRAP 21 33671388 C T 25363760 0.0139 neutral CRYZL1 21 34963511 T C 25363760 0.1382 neutral ITSN1 21 35260537 T G 25363760 0.9507 deleterious MORC3 21 37711086 T G 25363760 0.4875 neutral DYRK1A 21 38877655 C T 25363760 DSCAM 21 41648022 A C 25363760 UMODL1 21 43547300 AC A 25363760 UBASH3A 21 43833609 T G 25363760 0.0053 neutral TRPM2 21 45820197 G A 25363760 0.9582 deleterious KRTAP10-11 21 46066486 C T 25363760 DIP2A 21 47976938 C T 25363760 POTEH 22 16287579 A AG 25363760 CECR1 22 17662817 C T 25363760 0.0054 neutral CECR2 22 18018792 T A 25363760 HIRA 22 19341564 A G 25363760 0.0113 neutral PI4KA 22 21167781 G A 25363760 SNAP29 22 21224680 T C 25363760 0.8785 deleterious CCDC116 22 21989210 C T 25363760 ZNF280B 22 22842831 T C 25363760 0.157 neutral PRAME 22 22892470 T C 25363760 0.043 neutral CABIN1 22 24452747 C T 25363760 0.5125 deleterious SPECC1L 22 24761563 A G 25363760 0.3961 neutral PIWIL3 22 25123995 A G 25363760 0.2684 neutral MYO18B 22 26164470 C G 25363760 0.0709 neutral MYO18B 22 26224858 C T 25363760 0.3962 neutral ASPHD2 22 26838481 G C 25363760 0.8996 deleterious TFIP11 22 26902369 C T 25363760 0.3066 neutral EWSR1 22 29693821 A G 25363760 AP1B1 22 29736801 A T 25363760 AP1B1 22 29754784 G A 25363760 RFPL1 22 29838013 C T 25363760 0.0108 neutral ASCC2 22 30185167 C A 25363760 TBC1D10A 22 30691044 G A 25363760 GAL3ST1 22 30951564 G C 25363760 0.9848 deleterious OSBP2 22 31284288 C T 25363760 0.0227 neutral MYH9 22 36690159 G A 25363760 MYH9 22 36690219 C T 25363760 MYH9 22 36692966 G A 25363760 CSF2RB 22 37332616 C T 25363760 0.2874 neutral CYTH4 22 37693679 C T 25363760 CARD10 22 37903943 C G 25363760 0.6429 deleterious CSNK1E 22 38694937 C T 25363760 0.9993 deleterious CSNK1E 22 38696888 T A 25363760 0.8718 deleterious SUN2 22 39134262 G A 25363760 CACNA1I 22 40069085 G A 25363760 0.9046 deleterious CACNA1I 22 40075841 G A 25363760 0.0829 neutral ST13 22 41223218 C T 25363760 0.0204 neutral EP300 22 41564872 G GT 25363760 PKDREJ 22 46652879 T C 25363760 0.6196 deleterious GTSE1 22 46704222 T C 25363760 CELSR1 22 46795678 T G 25363760 0.4518 deleterious GRAMD4 22 47033763 C T 25363760 SBF1 22 50898487 C T 25363760 0.9831 deleterious SBF1 22 50899099 C T 25363760 0.0578 neutral CPT1B 22 51015426 G A 25363760 0.2495 neutral SHANK3 22 51137146 G A 25363760 KLHL17 1 897349 G A 25363768 SCNN1D 1 1222518 C A 25363768 SCNN1D 1 1225729 G A 25363768 0.0824 neutral RERE 1 8421838 C A 25363768 0.1686 neutral TMEM201 1 9673136 C T 25363768 0.5113 deleterious UBE4B 1 10166514 G A 25363768 0.1772 neutral SRM 1 11115912 C G 25363768 0.9877 deleterious SPEN 1 16261227 G C 25363768 0.1728 neutral CROCC 1 17263235 G A 25363768 0.2238 neutral ARHGEF10L 1 17964465 G A 25363768 UBR4 1 19453084 G A 25363768 UBR4 1 19481533 C T 25363768 0.4875 neutral UBR4 1 19528292 T G 25363768 0.4875 neutral TMCO4 1 20009872 G C 25363768 HSPG2 1 22181274 GGGTCA G 25363768 FUCA1 1 24189638 G A 25363768 SEPN1 1 26135190 G T 25363768 EXTL1 1 26360172 T G 25363768 RPS6KA1 1 26885393 C T 25363768 0.5125 deleterious SFN 1 27190426 G A 25363768 AHDC1 1 27877086 G A 25363768 0.94 deleterious PTPRU 1 29587385 C A 25363768 0.9639 deleterious SDC3 1 31349764 T C 25363768 0.0208 neutral IQCC 1 32672714 G A 25363768 0.8278 deleterious THRAP3 1 36759462 A G 25363768 0.7166 deleterious EPHA10 1 38197144 C T 25363768 POU3F1 1 38511611 G A 25363768 MACF1 1 39789893 A G 25363768 0.0853 neutral SMAP2 1 40875459 T A 25363768 PTPRF 1 44056693 A C 25363768 0.998 deleterious STIL 1 47746815 T C 25363768 0.0256 neutral SSBP3 1 54694107 C T 25363768 PCSK9 1 55512213 T C 25363768 TACSTD2 1 59041944 C G 25363768 DOCK7 1 62959980 C T 25363768 0.1859 neutral DNAJC6 1 65858181 A G 25363768 SERBP1 1 67878948 T G 25363768 IFI44L 1 79093807 T A 25363768 IFI44L 1 79102731 A G 25363768 ELTD1 1 79392717 C T 25363768 MTF2 1 93580638 C T 25363768 0.1495 neutral FNBP1L 1 94009717 A C 25363768 0.4969 deleterious PTBP2 1 97189108 T TTA 25363768 LAMTOR5 1 110944184 G A 25363768 KCND3 1 112525092 C G 25363768 0.9995 deleterious KCND3 1 112525095 T A 25363768 0.9999 deleterious MOV10 1 113242329 A G 25363768 0.8942 deleterious MAB21L3 1 116675758 G A 25363768 PTGFRN 1 117527332 C T 25363768 0.7667 deleterious SV2A 1 149881028 C G 25363768 0.6833 deleterious ECM1 1 150484919 G A 25363768 0.7073 deleterious ADAMTSL4 1 150529511 C T 25363768 0.0581 neutral BNIPL 1 151015830 T C 25363768 SELENBP1 1 151337466 G A 25363768 0.07 neutral POGZ 1 151384237 T C 25363768 0.5482 deleterious CHTOP 1 153617559 G A 25363768 ILF2 1 153637720 G A 25363768 ATP8B2 1 154321590 G A 25363768 0.1251 neutral TDRD10 1 154493911 C T 25363768 0.1705 neutral ASH1L 1 155340680 C A 25363768 MEF2D 1 156446863 G A 25363768 0.9783 deleterious IQGAP3 1 156536205 C T 25363768 0.7899 deleterious INSRR 1 156813260 AG A 25363768 PEAR1 1 156883034 C T 25363768 0.7847 deleterious KIRREL 1 158045967 G A 25363768 SPTA1 1 158585162 C T 25363768 0.4875 neutral OR10J3 1 159283723 C T 25363768 0.0017 neutral APCS 1 159557753 C T 25363768 ATP1A4 1 160125943 C T 25363768 0.8545 deleterious ARHGAP30 1 161017762 G A 25363768 SLC9C2 1 173490530 G A 25363768 RFWD2 1 175958552 T C 25363768 0.8448 deleterious FAM20B 1 179013336 G A 25363768 SOAT1 1 179311252 C A 25363768 0.7801 deleterious CACNA1E 1 181767871 G A 25363768 LAMC1 1 183086530 T C 25363768 0.5407 deleterious LAMC2 1 183184672 C T 25363768 0.1275 neutral SMG7 1 183502868 C T 25363768 0.0488 neutral KCNT2 1 196397281 A G 25363768 0.9613 deleterious CAMSAP2 1 200811145 G A 25363768 KIF21B 1 200971340 G A 25363768 0.1133 neutral PTPN7 1 202119524 T C 25363768 0.9479 deleterious KDM5B 1 202710688 G A 25363768 0.1486 neutral KDM5B 1 202711784 T TA 25363768 KDM5B 1 202746219 A G 25363768 0.9914 deleterious PRELP 1 203452982 A G 25363768 0.6648 deleterious ZC3H11A 1 203816493 G T 25363768 0.9745 deleterious PFKFB2 1 207237157 AT A 25363768 CR1 1 207793410 C T 25363768 0.6101 deleterious DIEXF 1 210014329 C T 25363768 EPRS 1 220170538 ATCT A 25363768 HHIPL2 1 222697001 A G 25363768 0.0933 neutral DISP1 1 223176218 C T 25363768 DISP1 1 223177742 G A 25363768 CAPN8 1 223853218 AC A 25363768 OBSCN 1 228509724 G A 25363768 0.1092 neutral NUP133 1 229602434 T C 25363768 0.0218 neutral NLRP3 1 247582253 G A 25363768 0.0066 neutral OR2T10 1 248756275 G T 25363768 ZNF692 1 249149951 G A 25363768 0.011 neutral TAF1B 2 10015988 C T 25363768 SMC6 2 17877683 T G 25363768 0.2349 deleterious ITSN2 2 24469704 C T 25363768 0.6094 deleterious EFR3B 2 25354705 G T 25363768 0.0162 neutral DNMT3A 2 25457176 G A 25363768 0.8708 deleterious HADHA 2 26432717 C A 25363768 0.8071 deleterious TMEM214 2 27258861 A G 25363768 0.0334 neutral CAD 2 27455388 T G 25363768 SPAST 2 32314636 C G 25363768 0.9977 deleterious NLRC4 2 32475483 T C 25363768 0.7999 deleterious TTC27 2 32983503 A G 25363768 0.3466 neutral STRN 2 37121152 C T 25363768 0.6773 deleterious EIF2AK2 2 37364142 G A 25363768 EPAS1 2 46603670 C T 25363768 FBXO11 2 48035295 CAG C 25363768 PSME4 2 54135923 A C 25363768 0.6628 deleterious SPTBN1 2 54858514 G C 25363768 0.3097 neutral RTN4 2 55253033 T C 25363768 CLHC1 2 55436920 T G 25363768 0.021 neutral SMEK2 2 55826186 C G 25363768 UGP2 2 64113658 A G 25363768 0.6709 deleterious PELI1 2 64322284 G A 25363768 0.6384 deleterious SERTAD2 2 64863430 C T 25363768 FAM136A 2 70529121 C A 25363768 0.8417 deleterious STAMBP 2 74072000 GAA G 25363768 DNAH6 2 84846793 A G 25363768 SMYD1 2 88409886 A G 25363768 0.6759 deleterious MRPS5 2 95774145 C T 25363768 0.4448 neutral SNRNP200 2 96953160 G A 25363768 NCAPH 2 97020087 T G 25363768 0.0918 neutral FER1L5 2 97368053 C T 25363768 ANKRD23 2 97508084 C T 25363768 BCL2L11 2 111881511 G A 25363768 MERTK 2 112725700 T G 25363768 GLI2 2 121742110 A T 25363768 BIN1 2 127818230 C T 25363768 CYP27C1 2 127944869 AC A 25363768 MYO7B 2 128322961 G A 25363768 MYO7B 2 128366324 C T 25363768 MYO7B 2 128384626 C T 25363768 0.916 deleterious WDR33 2 128481973 AT A 25363768 FAM168B 2 131810589 C G 25363768 TUBA3D 2 132238286 C T 25363768 CCNT2 2 135676549 A G 25363768 0.4641 neutral ZRANB3 2 135982012 A G 25363768 0.0374 neutral ZRANB3 2 136072939 G A 25363768 0.0021 neutral MBD5 2 149227283 C G 25363768 0.9221 deleterious NEB 2 152403966 A G 25363768 0.2845 neutral NEB 2 152548841 T A 25363768 CYTIP 2 158272559 C T 25363768 0.1014 neutral BAZ2B 2 160182250 G GT 25363768 BAZ2B 2 160231217 A C 25363768 0.0802 neutral BAZ2B 2 160289731 G A 25363768 SCN3A 2 165950891 C T 25363768 0.8897 deleterious SCN2A 2 166152367 G A 25363768 0.6774 deleterious CSRNP3 2 166514338 G A 25363768 SCN9A 2 167145151 C T 25363768 LRP2 2 170062840 C T 25363768 0.4138 neutral BBS5 2 170336053 C T 25363768 UBR3 2 170732428 A C 25363768 UBR3 2 170885884 C T 25363768 SP3 2 174820528 C T 25363768 0.4244 neutral HOXD1 2 177054587 A AT 25363768 TTN 2 179425280 C T 25363768 0.6359 deleterious TTN 2 179486354 C G 25363768 0.4944 deleterious NOP58 2 203162254 C T 25363768 ZDBF2 2 207171918 T C 25363768 0.0019 neutral PIKFYVE 2 209217389 G A 25363768 ERBB4 2 212522487 T C 25363768 IKZF2 2 213886838 C G 25363768 0.5393 deleterious ATIC 2 216211489 G A 25363768 0.9995 deleterious RPL37A 2 217363534 G T 25363768 TNS1 2 218683269 C T 25363768 TNS1 2 218713428 G A 25363768 RNF25 2 219529550 C T 25363768 0.2001 neutral FAM134A 2 220045455 A T 25363768 0.9173 deleterious ABCB6 2 220080755 G A 25363768 0.4453 neutral ANKZF1 2 220100806 C T 25363768 SPEG 2 220341659 G T 25363768 COL4A4 2 227872302 G A 25363768 GIGYF2 2 233675982 C T 25363768 UGT1A4 2 234628270 G A 25363768 UGT1A4 2 234628270 G A 25363768 UGT1A4 2 234628270 G A 25363768 UGT1A10 2 234676519 C T 25363768 COL6A3 2 238303503 T C 25363768 0.6046 deleterious LRRFIP1 2 238617225 G A 25363768 LRRFIP1 2 238617256 G GA 25363768 PER2 2 239161576 G A 25363768 KIF1A 2 241658532 C T 25363768 0.9612 deleterious PDCD1 2 242795110 G T 25363768 0.0014 neutral CNTN6 3 1371543 G A 25363768 0.2679 neutral MTMR14 3 9730364 C T 25363768 NUP210 3 13413397 C T 25363768 0.3384 neutral C3orf20 3 14768527 C T 25363768 KCNH8 3 19491606 C T 25363768 0.992 deleterious ZNF385D 3 21606120 G A 25363768 TOP2B 3 25674261 CCACATA C 25363768 XIRP1 3 39230145 G A 25363768 CX3CR1 3 39307946 C G 25363768 0.0324 neutral ULK4 3 41977284 A T 25363768 TRAK1 3 42242295 G A 25363768 CXCR6 3 45988924 A G 25363768 KIF9-AS1 3 47264607 C T 25363768 KIF9 3 47291943 A T 25363768 KIF9 3 47291948 C T 25363768 MAP4 3 47957817 C T 25363768 RASSF1 3 50374742 C T 25363768 PBRM1 3 52584431 T C 25363768 PBRM1 3 52643674 G A 25363768 0.9458 deleterious GNL3 3 52727771 A G 25363768 0.0164 neutral ITIH3 3 52836816 A G 25363768 0.9515 deleterious CACNA2D3 3 55108254 T C 25363768 ARHGEF3 3 57069148 G A 25363768 DNAH12 3 57357136 C T 25363768 FLNB 3 58095814 C T 25363768 0.9263 deleterious CGGBP1 3 88104967 G A 25363768 0.6352 deleterious CRYBG3 3 97611837 TGTGA T 25363768 TOMM70A 3 100084410 A G 25363768 C3orf52 3 111805385 C G 25363768 0.0957 neutral BOC 3 112997521 A T 25363768 QTRTD1 3 113795683 G A 25363768 0.8534 deleterious POGLUT1 3 119205717 C T 25363768 0.985 deleterious GPR156 3 119886113 C T 25363768 GOLGB1 3 121413433 C A 25363768 0.0327 neutral CASR 3 121976036 T C 25363768 KALRN 3 124141039 ATATATGAGAG A 25363768 ALDH1L1 3 125822675 T G 25363768 0.1361 neutral KLF15 3 126071150 C G 25363768 0.1694 neutral H1FOO 3 129268116 GC G 25363768 DNAJC13 3 132247145 C T 25363768 0.8439 deleterious ACAD11 3 132277795 A C 25363768 RYK 3 133896766 T A 25363768 DZIP1L 3 137799496 GCTCTGGACCCCAT G 25363768 GK5 3 141884477 T C 25363768 0.9307 deleterious U2SURP 3 142733223 A G 25363768 0.5669 deleterious CHST2 3 142839813 G C 25363768 0.8669 deleterious SELT 3 150340799 TCTGATGA T 25363768 PLCH1 3 155208647 G C 25363768 0.8701 deleterious OTOL1 3 161217077 A AG 25363768 ZBBX 3 166958690 G T 25363768 0.0411 neutral ACTRT3 3 169485485 C T 25363768 0.0112 neutral SKIL 3 170078902 C G 25363768 SKIL 3 170079096 A C 25363768 0.2953 neutral ECT2 3 172504293 G A 25363768 LAMP3 3 182871681 T G 25363768 0.5042 neutral MAP6D1 3 183535206 T C 25363768 0.9606 deleterious ABCC5 3 183667631 G A 25363768 0.9982 deleterious EIF4G1 3 184049725 T G 25363768 DGKG 3 186006628 C A 25363768 0.0591 neutral TP63 3 189379852 C T 25363768 ATP13A3 3 194151881 T C 25363768 MUC4 3 195512768 T A 25363768 0.0012 neutral MUC4 3 195513364 C T 25363768 0.0099 neutral MUC4 3 195515198 C G 25363768 0.0064 neutral UBXN7 3 196134173 G A 25363768 KIAA0226 3 197423603 A G 25363768 KIAA0226 3 197423604 C T 25363768 LRCH3 3 197544071 G A 25363768 UVSSA 4 1348625 C T 25363768 0.6748 deleterious WHSC1 4 1944041 T C 25363768 GRK4 4 3009577 G A 25363768 ZBTB49 4 4303826 A T 25363768 0.9987 deleterious JAKMIP1 4 6050571 C T 25363768 JAKMIP1 4 6114519 T C 25363768 0.5365 deleterious AFAP1 4 7840289 C T 25363768 0.0742 neutral ACOX3 4 8412052 C T 25363768 0.8804 deleterious PROM1 4 15981050 A G 25363768 FAM184B 4 17706804 G T 25363768 0.0394 neutral PCDH7 4 30724309 G A 25363768 0.8318 deleterious TBC1D1 4 38117541 G A 25363768 0.9494 deleterious UGDH 4 39506998 A G 25363768 UBE2K 4 39699887 CGGTGGCGGTGGTCGTAGCGGTGGCGGA C 25363768 DCAF4L1 4 41984085 C T 25363768 GNPDA2 4 44709892 T C 25363768 0.1188 neutral TECRL 4 65180381 C T 25363768 0.4962 deleterious YTHDC1 4 69195952 AT A 25363768 YTHDC1 4 69202896 CTCCTCCTCCTCCTCT C 25363768 MUC7 4 71339820 C T 25363768 SLC4A4 4 72423497 T C 25363768 AFP 4 74318320 C T 25363768 0.0805 neutral AFM 4 74357772 C T 25363768 FRAS1 4 79353580 G A 25363768 0.0689 neutral ENOPH1 4 83378196 G T 25363768 THAP9 4 83839760 C A 25363768 0.2814 neutral LIN54 4 83852236 C T 25363768 PTPN13 4 87684079 T C 25363768 PTPN13 4 87696594 G A 25363768 DSPP 4 88537294 T C 25363768 MANBA 4 103644163 G C 25363768 0.9908 deleterious TET2 4 106196675 C T 25363768 0.4219 neutral PPA2 4 106290837 T A 25363768 TBCK 4 107165814 G C 25363768 0.4877 deleterious TBCK 4 107168437 G C 25363768 0.0236 neutral TIFA 4 113199493 T G 25363768 0.2625 neutral ALPK1 4 113303646 G A 25363768 0.0826 neutral TNIP3 4 122059804 C T 25363768 FGF2 4 123797538 C T 25363768 0.9613 deleterious SPATA5 4 124177304 T C 25363768 0.4187 neutral FAT4 4 126411443 G A 25363768 0.5125 deleterious HSPA4L 4 128715309 G A 25363768 DCHS2 4 155241851 C T 25363768 0.3025 neutral GUCY1A3 4 156634254 T A 25363768 0.5035 deleterious RAPGEF2 4 160259637 C A 25363768 WWC2 4 184129311 T C 25363768 ENPP6 4 185012498 C T 25363768 F11 4 187201555 GGTTATGCAGACACCCTT G 25363768 FAT1 4 187517848 G A 25363768 FAT1 4 187549328 A T 25363768 0.6926 deleterious SEMA5A 5 9050563 G C 25363768 0.9923 deleterious SEMA5A 5 9119084 GTGCTGGCAGCA G 25363768 DNAH5 5 13841076 C T 25363768 0.8673 deleterious TRIO 5 14364820 G T 25363768 0.2011 neutral PDZD2 5 32087698 G A 25363768 0.0103 neutral SLC45A2 5 33982500 T C 25363768 0.0266 neutral CCDC152 5 42759197 A G 25363768 DHX29 5 54563046 G A 25363768 MCCC2 5 70900233 C G 25363768 0.962 deleterious MAP1B 5 71494926 C T 25363768 0.9632 deleterious POC5 5 74981033 A G 25363768 0.0044 neutral IQGAP2 5 75923263 G A 25363768 AP3B1 5 77316626 A T 25363768 PAPD4 5 78975417 G C 25363768 0.7585 deleterious CHD1 5 98194693 C CA 25363768 TRIM36 5 114473324 A C 25363768 SEC24A 5 134050741 C G 25363768 0.9304 deleterious SEC24A 5 134059281 C A 25363768 0.3635 neutral SEC24A 5 134059282 C G 25363768 0.7207 deleterious SMAD5 5 135489574 TAAAA T 25363768 PCDHA2 5 140175208 C A 25363768 0.9993 deleterious PCDHB9 5 140567643 G C 25363768 PCDHB9 5 140569226 G T 25363768 HDAC3 5 141009384 A AC 25363768 TCERG1 5 145890147 G A 25363768 0.4017 neutral DPYSL3 5 146804493 C T 25363768 0.0642 neutral FBXO38 5 147821679 A G 25363768 0.1052 neutral CAMK2A 5 149631595 T A 25363768 0.9999 deleterious SPARC 5 151054254 A G 25363768 G3BP1 5 151173742 A G 25363768 0.0757 neutral DOCK2 5 169412870 C T 25363768 RANBP17 5 170597192 C T 25363768 0.4825 neutral ERGIC1 5 172315717 G A 25363768 GPRIN1 5 176026121 TCAAAGACCCAGGA T 25363768 UIMC1 5 176334136 G C 25363768 0.2923 neutral DOK3 5 176931344 C T 25363768 ZFP2 5 178359410 C T 25363768 BTNL9 5 180485372 T A 25363768 0.0379 neutral SSR1 6 7299010 ATAACTG A 25363768 GCNT2 6 10529778 G A 25363768 0.9361 deleterious GCNT2 6 10586330 G T 25363768 GCM2 6 10874703 C T 25363768 0.3701 neutral RANBP9 6 13711321 G A 25363768 JARID2 6 15374368 G A 25363768 HIST1H3G 6 26271503 T C 25363768 0.5971 deleterious HIST1H3G 6 26271590 G A 25363768 0.7508 deleterious BTN2A3P 6 26422389 C T 25363768 ZSCAN26 6 28239880 G A 25363768 ZKSCAN3 6 28327608 AGGAGCAGATCCTGGAGCTGCTGGTGCT A 25363768 HLA-F-AS1 6 29697892 ATGCTCG A 25363768 PBX2 6 32155879 T A 25363768 0.8661 deleterious HLA-DMA 6 32916657 A C 25363768 BRD2 6 32942326 G T 25363768 0.2186 neutral UHRF1BP1 6 34825498 C T 25363768 TCP11 6 35088753 G A 25363768 KIF6 6 39512337 C T 25363768 0.7291 deleterious TFEB 6 41657498 T A 25363768 0.2257 neutral UBR2 6 42657338 G T 25363768 0.5125 deleterious CNPY3 6 42905450 T A 25363768 PPP2R5D 6 42975179 CT C 25363768 PTK7 6 43109471 C T 25363768 TDRD6 6 46661295 A G 25363768 GPR110 6 46976699 A C 25363768 MLIP 6 53986370 A C 25363768 DST 6 56566767 AG A 25363768 COL19A1 6 70637786 G T 25363768 MTO1 6 74192157 T G 25363768 COL12A1 6 75843100 C G 25363768 0.8909 deleterious SENP6 6 76412395 G A 25363768 0.6132 deleterious MYO6 6 76527291 G A 25363768 CASP8AP2 6 90581006 A G 25363768 EPHA7 6 93965574 T C 25363768 0.0189 neutral MMS22L 6 97627418 A C 25363768 0.9712 deleterious USP45 6 99887716 G A 25363768 0.9771 deleterious HACE1 6 105224911 G A 25363768 0.3442 neutral CDC40 6 110547478 G C 25363768 CLVS2 6 123369774 TC T 25363768 LAMA2 6 129468180 A C 25363768 0.7211 deleterious AHI1 6 135754219 G T 25363768 AHI1 6 135774505 G A 25363768 0.5125 deleterious MAP3K5 6 137015334 A G 25363768 ECT2L 6 139159666 A G 25363768 HIVEP2 6 143094725 G A 25363768 0.9885 deleterious UTRN 6 145079042 A G 25363768 SHPRH 6 146266701 T C 25363768 0.8233 deleterious SASH1 6 148711366 C T 25363768 0.4304 deleterious PCMT1 6 150123528 CTCTT C 25363768 LRP11 6 150164130 T G 25363768 0.1706 neutral ARID1B 6 157525120 A G 25363768 0.0736 neutral TULP4 6 158924672 T G 25363768 0.3438 neutral SYTL3 6 159184512 G A 25363768 0.4927 deleterious MRPL18 6 160211586 A G 25363768 IGF2R 6 160445739 A G 25363768 MLLT4 6 168276026 G A 25363768 0.4142 neutral PRKAR1B 7 624187 G A 25363768 0.9739 deleterious ADAP1 7 944768 C T 25363768 0.605 deleterious EIF3B 7 2416614 C G 25363768 0.0081 neutral LFNG 7 2565873 C T 25363768 ACTB 7 5567393 G A 25363768 0.856 deleterious KDELR2 7 6505719 TAGA T 25363768 C7orf26 7 6639797 C T 25363768 NUPL2 7 23226786 T C 25363768 NFE2L3 7 26224578 CCTTT C 25363768 CHN2 7 29519745 T TG 25363768 PPP1R17 7 31736721 C A 25363768 BBS9 7 33376045 T C 25363768 CDK13 7 40134546 T TGGCAGA 25363768 URGCP 7 43918279 G A 25363768 C7orf57 7 48089488 G A 25363768 ZNF138 7 64292065 C T 25363768 0.0062 neutral ASL 7 65547355 G A 25363768 0.9001 deleterious SBDS 7 66459316 G A 25363768 WBSCR17 7 71130393 T C 25363768 WBSCR17 7 71130575 G A 25363768 POM121 7 72419008 G C 25363768 FKBP6 7 72754789 G T 25363768 0.2017 neutral LIMK1 7 73513559 G A 25363768 0.8818 deleterious POM121C 7 75052242 C T 25363768 PTPN12 7 77265144 G A 25363768 0.0609 neutral ABCB1 7 87145975 A G 25363768 RUNDC3B 7 87339897 G A 25363768 MTERF 7 91503940 C T 25363768 ANKIB1 7 92028037 AACTGGTGCTGCCAGAAGATTC A 25363768 FAM133B 7 92207484 C T 25363768 0.1775 neutral SAMD9L 7 92765186 G A 25363768 LMTK2 7 97823256 C A 25363768 0.7966 deleterious TRRAP 7 98508792 C T 25363768 TAF6 7 99711308 T C 25363768 0.26 neutral STAG3 7 99802722 T C 25363768 0.9733 deleterious MEPCE 7 100028771 G A 25363768 0.4763 deleterious GIGYF1 7 100282216 C CCATCT 25363768 SLC12A9 7 100460363 G A 25363768 0.3047 neutral ACHE 7 100488870 G A 25363768 0.6754 deleterious ACHE 7 100491403 C T 25363768 0.9971 deleterious MUC17 7 100682275 A G 25363768 PLOD3 7 100850973 C T 25363768 PNPLA8 7 108128243 C G 25363768 0.1669 neutral KCP 7 128547390 G A 25363768 TNPO3 7 128622321 G A 25363768 0.0273 neutral AHCYL2 7 129008378 A G 25363768 0.0082 neutral STRIP2 7 129094327 G A 25363768 0.142 neutral LRGUK 7 133827810 C T 25363768 PRSS2 7 142480014 G C 25363768 TRPV5 7 142612052 T G 25363768 0.9976 deleterious NOBOX 7 144094582 C T 25363768 NOBOX 7 144097259 C T 25363768 0.3269 neutral ZNF862 7 149544968 G A 25363768 0.0842 neutral LRRC61 7 150034256 C T 25363768 AOC1 7 150553909 G T 25363768 ASIC3 7 150749266 AG A 25363768 PRKAG2 7 151510351 G A 25363768 DPP6 7 154561183 G A 25363768 0.825 deleterious MCPH1 8 6272346 A G 25363768 0.9146 deleterious TNKS 8 9567627 T C 25363768 BLK 8 11415531 T C 25363768 0.9702 deleterious GATA4 8 11607635 G A 25363768 0.9719 deleterious FGL1 8 17731961 G T 25363768 0.0936 neutral ASAH1 8 17928913 T A 25363768 SFTPC 8 22019422 G A 25363768 PIWIL2 8 22147874 G A 25363768 EGR3 8 22550356 G A 25363768 DOCK5 8 25257428 C CT 25363768 EBF2 8 25898178 G T 25363768 0.9987 deleterious KCNU1 8 36793231 T C 25363768 TACC1 8 38645085 C G 25363768 ADAM9 8 38884348 C T 25363768 ADAM9 8 38884349 T C 25363768 ANK1 8 41550730 G A 25363768 ANK1 8 41641520 T C 25363768 PRKDC 8 48849076 G A 25363768 SNTG1 8 51306875 G A 25363768 PXDNL 8 52320634 G A 25363768 ARMC1 8 66534524 C A 25363768 0.1103 neutral PREX2 8 69002939 C T 25363768 0.7897 deleterious LRRCC1 8 86037085 G A 25363768 0.1709 neutral DCAF4L2 8 88885654 G C 25363768 0.7485 deleterious ESRP1 8 95680394 A C 25363768 VPS13B 8 100479648 C T 25363768 0.9061 deleterious VPS13B 8 100583075 T A 25363768 FBXO43 8 101153250 G C 25363768 0.0577 neutral AZIN1 8 103852065 A T 25363768 NUDCD1 8 110255473 G A 25363768 0.911 deleterious TRPS1 8 116616940 C A 25363768 0.1152 neutral HAS2 8 122641512 G C 25363768 MTSS1 8 125568650 T C 25363768 ASAP1 8 131179874 A G 25363768 ADCY8 8 131949457 C A 25363768 TG 8 133935689 C T 25363768 BAI1 8 143604104 C T 25363768 TOP1MT 8 144397947 C T 25363768 PARP10 8 145059354 A G 25363768 OPLAH 8 145110038 C T 25363768 0.7719 deleterious NFIB 9 14150143 C T 25363768 CCDC171 9 15784693 G A 25363768 RPS6 9 19379608 G A 25363768 PTPLAD2 9 21015926 G A 25363768 ELAVL2 9 23692707 CACGGATG C 25363768 TUSC1 9 25677688 C T 25363768 EQTN 9 27291044 G T 25363768 0.0192 neutral DDX58 9 32493940 C T 25363768 0.194 neutral VCP 9 35057454 C T 25363768 0.9991 deleterious UNC13B 9 35231139 C G 25363768 FAM189A2 9 71986456 A C 25363768 0.2448 neutral PTAR1 9 72333476 G C 25363768 0.1094 neutral TMC1 9 75431105 TC T 25363768 TRPM6 9 77416901 G T 25363768 0.657 deleterious PCSK5 9 78628325 A C 25363768 PRUNE2 9 79323453 C T 25363768 0.009 neutral VPS13A 9 79930228 AAGTC A 25363768 SPATA31D1 9 84607958 A G 25363768 0.0445 neutral FRMD3 9 85926860 A G 25363768 0.6572 deleterious HNRNPK 9 86585713 C T 25363768 0.4304 neutral NTRK2 9 87338598 G T 25363768 0.6836 deleterious DAPK1 9 90264933 G A 25363768 0.0817 neutral NFIL3 9 94172880 A C 25363768 0.4612 neutral CENPP 9 95100025 C A 25363768 OGN 9 95155495 TAAAC T 25363768 C9orf3 9 97563096 C T 25363768 ERCC6L2 9 98654049 C T 25363768 SLC35D2 9 99086455 T C 25363768 C9orf156 9 100672811 G A 25363768 RNF20 9 104297835 G A 25363768 ZNF462 9 109692806 C A 25363768 0.2326 neutral ACTL7A 9 111625008 C T 25363768 INIP 9 115456456 T G 25363768 0.7948 deleterious COL27A1 9 116930294 C T 25363768 AKNA 9 117103870 G A 25363768 0.1522 neutral C5 9 123734289 A G 25363768 OR1J2 9 125273716 G A 25363768 0.0065 neutral GPR144 9 127237709 C T 25363768 GAPVD1 9 128092441 C G 25363768 0.3342 neutral GAPVD1 9 128118025 C A 25363768 0.4688 deleterious SET 9 131454235 A G 25363768 0.1511 neutral NUP188 9 131752513 C T 25363768 ABL1 9 133759724 T C 25363768 0.7075 deleterious ADAMTS13 9 136315045 G A 25363768 PPP1R26 9 138378306 G A 25363768 CAMSAP1 9 138758402 C T 25363768 UBAC1 9 138831489 C CA 25363768 GPSM1 9 139231956 G A 25363768 0.6661 deleterious NOTCH1 9 139402449 G A 25363768 UAP1L1 9 139973032 C T 25363768 DIP2C 10 375509 G A 25363768 0.992 deleterious LARP4B 10 871029 G T 25363768 0.1986 neutral LARP4B 10 876865 TCA T 25363768 AKR1C2 10 5032204 A G 25363768 0.0957 neutral CELF2 10 11330451 C T 25363768 PRPF18 10 13629108 A G 25363768 0.3089 neutral FRMD4A 10 13852928 G A 25363768 DCLRE1C 10 14977449 C G 25363768 ITGA8 10 15634273 G A 25363768 0.065 neutral RSU1 10 16806500 G A 25363768 0.6431 deleterious ARHGAP21 10 24886431 CTT C 25363768 WAC 10 28879673 CAA C 25363768 ITGB1 10 33224471 T C 25363768 0.0529 neutral SYT15 10 46968675 A G 25363768 MAPK8 10 49634452 A T 25363768 0.7527 deleterious WDFY4 10 50075397 A G 25363768 WDFY4 10 50109868 C A 25363768 0.765 deleterious NCOA4 10 51585462 CAG C 25363768 PCDH15 10 55581663 G A 25363768 ANK3 10 61833372 G A 25363768 0.9349 deleterious ANK3 10 61967911 G A 25363768 JMJD1C 10 64968221 C T 25363768 0.0479 neutral JMJD1C 10 65140206 G A 25363768 PLA2G12B 10 74701046 T C 25363768 0.8925 deleterious ZSWIM8 10 75560469 C G 25363768 0.4303 neutral VCL 10 75860760 A G 25363768 0.9814 deleterious KAT6B 10 76781848 C A 25363768 0.0751 neutral LRIT1 10 85992477 CTCCTGGGCT C 25363768 CCSER2 10 86131994 G A 25363768 0.3943 neutral LDB3 10 88478538 G T 25363768 0.5125 deleterious SORBS1 10 97098949 CCA C 25363768 ALDH18A1 10 97371016 C G 25363768 0.0288 neutral C10orf12 10 98744251 G C 25363768 0.1509 neutral PI4K2A 10 99426263 C T 25363768 0.928 deleterious SCD 10 102116547 AC A 25363768 C10orf76 10 103771485 T C 25363768 0.4745 deleterious PDCD11 10 105184868 G A 25363768 0.0487 neutral ADD3 10 111882047 C A 25363768 0.7368 deleterious TECTB 10 114061923 G A 25363768 TCF7L2 10 114910883 G A 25363768 NRAP 10 115406755 C T 25363768 0.9697 deleterious AFAP1L2 10 116082909 G C 25363768 AFAP1L2 10 116164208 G T 25363768 TIAL1 10 121336635 T C 25363768 0.5673 deleterious BAG3 10 121429632 G A 25363768 TACC2 10 123985965 C T 25363768 0.0936 neutral C10orf90 10 128193561 A AG 25363768 DOCK1 10 129242541 C T 25363768 0.5441 deleterious PPP2R2D 10 133761014 CATTTT C 25363768 KNDC1 10 135027123 A G 25363768 MUC6 11 1018420 T G 25363768 0.009 neutral MUC2 11 1090971 C T 25363768 0.0082 neutral MUC2 11 1094679 G A 25363768 0.0171 neutral MUC2 11 1104228 G A 25363768 0.0126 neutral MUC2 11 1104266 G A 25363768 MUC5B 11 1264158 T C 25363768 MUC5B 11 1265831 T C 25363768 0.0003 neutral MUC5B 11 1269758 C T 25363768 0.0265 neutral MUC5B 11 1271969 GCACAACCACCACACC G 25363768 MOB2 11 1579522 G GT 25363768 SYT8 11 1856560 C T 25363768 SLC22A18 11 2939260 C T 25363768 0.0094 neutral TRIM5 11 5699639 T C 25363768 0.0159 neutral C11orf42 11 6231119 C T 25363768 0.3698 neutral APBB1 11 6417424 G GC 25363768 RRP8 11 6623212 T G 25363768 0.196 neutral SCUBE2 11 9077462 A G 25363768 USP47 11 11969599 G A 25363768 0.5275 deleterious MICAL2 11 12247918 G A 25363768 PLEKHA7 11 16863104 A C 25363768 0.1597 neutral USH1C 11 17552952 CG C 25363768 MRGPRX1 11 18955753 C A 25363768 MRGPRX1 11 18955754 C A 25363768 0.0137 neutral NAV2 11 20117286 C T 25363768 NELL1 11 21135209 C T 25363768 0.5534 deleterious ANO3 11 26484618 G A 25363768 0.1933 neutral DCDC5 11 30925196 G A 25363768 0.4242 deleterious DEPDC7 11 33049217 A G 25363768 ABTB2 11 34182470 C T 25363768 0.0408 neutral MAPK8IP1 11 45927224 GCAGTTTGTGGAGTA G 25363768 PHF21A 11 45971023 CT C 25363768 MADD 11 47296389 G T 25363768 0.0174 neutral PTPRJ 11 48185164 A G 25363768 1 deleterious OR4C15 11 55322787 C A 25363768 MPEG1 11 58979679 G A 25363768 MS4A15 11 60531221 C T 25363768 SYT7 11 61290653 T C 25363768 0.9758 deleterious HNRNPUL2 11 62490296 C T 25363768 0.0393 neutral SLC22A24 11 62850754 C T 25363768 0.0006 neutral SLC22A11 11 64331869 G T 25363768 0.9932 deleterious NRXN2 11 64444540 A AG 25363768 SPDYC 11 64939990 C T 25363768 LTBP3 11 65308636 C T 25363768 0.9337 deleterious PCNXL3 11 65396096 G T 25363768 0.9804 deleterious MUS81 11 65633438 G A 25363768 CNIH2 11 66050162 C T 25363768 CCDC87 11 66358293 C A 25363768 RBM14 11 66391961 C G 25363768 0.2001 neutral C11orf80 11 66515885 CAT C 25363768 ADRBK1 11 67046915 G A 25363768 CORO1B 11 67208799 C T 25363768 PITPNM1 11 67265421 G A 25363768 C11orf24 11 68029416 AGTCTCTACCT A 25363768 LRP5 11 68181294 C T 25363768 0.0983 neutral PPFIA1 11 70176336 C T 25363768 0.9257 deleterious PPFIA1 11 70178154 C T 25363768 0.9406 deleterious SHANK2 11 70858273 A C 25363768 LRTOMT 11 71818988 G T 25363768 STARD10 11 72468902 G A 25363768 ARHGEF17 11 73057978 T C 25363768 GDPD5 11 75151018 C T 25363768 USP35 11 77920689 C T 25363768 FAT3 11 92087350 A C 25363768 0.0931 neutral FAT3 11 92533228 G A 25363768 0.9829 deleterious KIAA1731 11 93463107 C CA 25363768 C11orf54 11 93483496 T G 25363768 SESN3 11 94908722 A C 25363768 CNTN5 11 99827672 C G 25363768 0.0318 neutral ARHGAP42 11 100814606 GCTGTT G 25363768 DYNC2H1 11 103024187 A C 25363768 0.949 deleterious CWF19L2 11 107207297 G A 25363768 0.9979 deleterious PPP2R1B 11 111630612 C G 25363768 0.5916 deleterious APOA5 11 116661599 C G 25363768 0.0365 neutral SIK3 11 116732054 G A 25363768 SIDT2 11 117062673 C T 25363768 BCL9L 11 118769835 G A 25363768 CCDC84 11 118868936 G A 25363768 0.8374 deleterious ABCG4 11 119031617 C T 25363768 0.1462 neutral USP2 11 119230374 C T 25363768 TECTA 11 121060495 T TGGAG 25363768 GRAMD1B 11 123477359 G A 25363768 0.0467 neutral ROBO4 11 124761588 C T 25363768 0.0412 neutral SLC37A2 11 124950640 G A 25363768 0.0323 neutral DDX25 11 125791158 A G 25363768 0.4004 neutral NFRKB 11 129739572 C T 25363768 ST14 11 130048290 A T 25363768 SNX19 11 130775881 C T 25363768 0.0032 neutral IGSF9B 11 133795695 T A 25363768 0.7712 deleterious NCAPD3 11 134072722 A G 25363768 0.005 neutral SLC6A13 12 332337 C T 25363768 0.6483 deleterious RAD52 12 1025873 C CA 25363768 CACNA1C 12 2717804 G C 25363768 0.7328 deleterious RHNO1 12 2997411 A G 25363768 0.0055 neutral C12orf4 12 4609424 C T 25363768 CHD4 12 6687251 C T 25363768 ZNF384 12 6788667 T C 25363768 0.5865 deleterious CLEC4A 12 8276483 G A 25363768 CLEC7A 12 10280034 G A 25363768 PRB4 12 11461769 G T 25363768 0.0334 neutral PRB4 12 11461769 G T 25363768 0.0334 neutral MANSC1 12 12483250 T C 25363768 0.05 neutral GYS2 12 21713361 G A 25363768 CMAS 12 22215336 T C 25363768 0.2469 neutral KIF21A 12 39726737 G A 25363768 0.4875 neutral C12orf40 12 40037634 A G 25363768 COL2A1 12 48389108 A G 25363768 DDX23 12 49225047 G A 25363768 0.0975 neutral KMT2D 12 49422858 C G 25363768 0.4395 neutral PRPF40B 12 50030515 T C 25363768 TMBIM6 12 50153110 T G 25363768 GPD1 12 50501397 C T 25363768 CSRNP2 12 51470315 CTT C 25363768 KRT85 12 52756034 C T 25363768 KRT71 12 52941786 G C 25363768 EIF4B 12 53416262 T C 25363768 COPZ1 12 54735998 C T 25363768 COPZ1 12 54739230 C G 25363768 OR6C3 12 55726227 C T 25363768 0.0301 neutral CS 12 56667052 G T 25363768 LRP1 12 57548340 C T 25363768 DDIT3 12 57911130 G A 25363768 MON2 12 62892681 T C 25363768 MDM1 12 68696451 G T 25363768 0.0765 neutral ZFC3H1 12 72017249 T C 25363768 MGAT4C 12 86373419 C T 25363768 0.3351 neutral NUDT4 12 93792632 G GT 25363768 SLC5A8 12 101588900 C T 25363768 SPIC 12 101876682 C T 25363768 NUAK1 12 106460608 G A 25363768 0.9044 deleterious POLR3B 12 106821067 C G 25363768 USP30 12 109510128 C T 25363768 0.0541 neutral ACACB 12 109625794 C T 25363768 MYO1H 12 109877458 C T 25363768 0.4755 neutral TRPV4 12 110222127 G A 25363768 0.7126 deleterious ACAD10 12 112187030 G T 25363768 0.5747 deleterious TPCN1 12 113715195 AG A 25363768 NOS1 12 117657987 C T 25363768 0.7719 deleterious TAOK3 12 118610267 G A 25363768 0.026 neutral POP5 12 121017378 CT C 25363768 P2RX7 12 121603240 C T 25363768 0.8809 deleterious LRRC43 12 122685163 A G 25363768 0.0111 neutral LRRC43 12 122685164 A G 25363768 0.0144 neutral RILPL2 12 123920711 A G 25363768 0.6553 deleterious NCOR2 12 124831242 C T 25363768 NCOR2 12 124887010 T C 25363768 0.869 deleterious RAN 12 131359121 C T 25363768 0.6098 deleterious PGAM5 12 133297372 G A 25363768 TUBA3C 13 19748039 G A 25363768 SACS 13 23914892 C G 25363768 0.7641 deleterious NBEA 13 35883758 A G 25363768 NBEA 13 36129146 C T 25363768 CCDC169-SOHLH2 13 36764150 A C 25363768 DGKH 13 42733479 G A 25363768 0.0245 neutral INTS6 13 51969635 A G 25363768 UCHL3 13 76140825 T A 25363768 LMO7 13 76393648 G A 25363768 RBM26 13 79979891 T C 25363768 0.2519 neutral SLITRK5 13 88327810 A G 25363768 0.9824 deleterious TM9SF2 13 100207823 A G 25363768 SLC10A2 13 103698629 ACAGT A 25363768 LAMP1 13 113965016 T C 25363768 SLC39A2 14 21469087 C A 25363768 OR4E2 14 22133429 A G 25363768 0.346 neutral AP1G2 14 24033756 C G 25363768 COCH 14 31359000 G A 25363768 HECTD1 14 31613330 G GT 25363768 BAZ1A 14 35227958 T C 25363768 RALGAPA1 14 36096327 TAAG T 25363768 KLHL28 14 45400640 A G 25363768 0.9934 deleterious TMEM260 14 57075985 A G 25363768 KIAA0586 14 58895068 A G 25363768 0.0148 neutral DAAM1 14 59660860 T A 25363768 VSX2 14 74711878 A G 25363768 0.9789 deleterious YLPM1 14 75278299 AGCG A 25363768 ESRRB 14 76948978 G A 25363768 IRF2BPL 14 77492033 GT G 25363768 UNC79 14 94088799 AC A 25363768 UNC79 14 94153024 C G 25363768 DDX24 14 94526572 G A 25363768 PPP4R4 14 94674915 T A 25363768 PPP4R4 14 94732223 A G 25363768 0.0185 neutral ATG2B 14 96756895 T C 25363768 0.194 neutral ATG2B 14 96794738 T G 25363768 VRK1 14 97322943 G T 25363768 EVL 14 100599090 GAGA G 25363768 WDR25 14 100996272 C T 25363768 0.0413 neutral DLK1 14 101200588 C T 25363768 KLC1 14 104145901 G A 25363768 PPP1R13B 14 104216291 AC A 25363768 AHNAK2 14 105414377 C G 25363768 0.001 neutral AHNAK2 14 105414378 A G 25363768 C14orf79 14 105459275 G A 25363768 NUDT14 14 105639351 TGGA T 25363768 BRF1 14 105707650 G A 25363768 0.978 deleterious MAGEL2 15 23890135 G A 25363768 ATP10A 15 25924832 C T 25363768 0.2924 neutral HERC2 15 28369345 G T 25363768 HERC2 15 28506003 G A 25363768 0.4283 neutral HERC2 15 28514517 A C 25363768 TRPM1 15 31330304 G C 25363768 0.476 neutral BMF 15 40398307 C T 25363768 RAD51 15 41022135 A G 25363768 0.8392 deleterious LTK 15 41801298 A G 25363768 0.8418 deleterious RPAP1 15 41828848 C A 25363768 MAPKBP1 15 42105962 T C 25363768 STARD9 15 42967936 C T 25363768 STARD9 15 43011023 G A 25363768 0.3513 neutral EPB42 15 43507463 C T 25363768 0.0206 neutral TGM7 15 43579545 C A 25363768 0.986 deleterious SPG11 15 44865888 C T 25363768 0.5083 deleterious FBN1 15 48780431 G A 25363768 USP8 15 50786392 A G 25363768 0.9116 deleterious DMXL2 15 51763583 G C 25363768 0.0631 neutral DMXL2 15 51778560 TCTTA T 25363768 MYO5C 15 52521530 A G 25363768 FAM214A 15 52900800 A G 25363768 0.5083 deleterious ONECUT1 15 53081003 T C 25363768 0.9957 deleterious ADAM10 15 58971416 G A 25363768 0.8645 deleterious MYO1E 15 59430484 G A 25363768 MYO1E 15 59506918 G C 25363768 0.4755 neutral TLN2 15 62948224 TTTACTC T 25363768 TRIP4 15 64701913 A G 25363768 0.9127 deleterious SLC24A1 15 65945118 G A 25363768 0.9995 deleterious DENND4A 15 65983633 A G 25363768 0.0406 neutral IQCH 15 67665783 T C 25363768 EDC3 15 74948257 A G 25363768 0.9216 deleterious SCAMP2 15 75137487 GA G 25363768 MPI 15 75189886 G A 25363768 0.0545 neutral SIN3A 15 75692422 A G 25363768 0.888 deleterious SCAPER 15 77020940 C T 25363768 0.8388 deleterious IREB2 15 78782973 A G 25363768 0.0014 neutral ADAMTS7 15 79089005 ACTACCAGGGTCT A 25363768 ABHD2 15 89738662 G A 25363768 POLG 15 89869940 ACTCCTC A 25363768 SYNM 15 99670801 G A 25363768 LYSMD4 15 100271431 G C 25363768 LRRK1 15 101567898 G A 25363768 0.9294 deleterious MPG 16 129450 G A 25363768 PDIA2 16 334569 C T 25363768 0.71 deleterious CAPN15 16 601435 C T 25363768 CAPN15 16 601654 G A 25363768 0.0086 neutral STUB1 16 731512 A C 25363768 0.7975 deleterious MSLN 16 818664 G A 25363768 CACNA1H 16 1257375 A G 25363768 0.9015 deleterious BAIAP3 16 1393190 A G 25363768 GNPTG 16 1412838 C T 25363768 0.7509 deleterious UNKL 16 1453364 C T 25363768 MAPK8IP3 16 1756621 A G 25363768 0.9993 deleterious EME2 16 1825806 G A 25363768 0.0294 neutral TSC2 16 2131695 C T 25363768 0.4408 deleterious PKD1 16 2160512 G A 25363768 PKD1 16 2162839 T C 25363768 THOC6 16 3077533 GAGGCAGGGGTGT G 25363768 MMP25 16 3100426 G A 25363768 SLX4 16 3640983 C G 25363768 0.7692 deleterious CREBBP 16 3786149 T C 25363768 0.2747 neutral NUDT16L1 16 4744147 G A 25363768 0.2469 neutral SNX29 16 12450055 C T 25363768 MKL2 16 14342897 T C 25363768 0.2337 neutral PDXDC1 16 15100370 A G 25363768 0.0868 neutral NDE1 16 15808946 G A 25363768 DCUN1D3 16 20873859 A G 25363768 0.9717 deleterious UQCRC2 16 21987556 A T 25363768 0.658 deleterious DCTN5 16 23678493 T C 25363768 PRKCB 16 24105500 G A 25363768 0.8967 deleterious C16orf82 16 27078590 G A 25363768 0.0193 neutral GTF3C1 16 27544696 G A 25363768 APOBR 16 28509202 A G 25363768 0.0061 neutral SH2B1 16 28877932 C CG 25363768 NFATC2IP 16 28965874 C T 25363768 SEZ6L2 16 29891363 G A 25363768 ITGAL 16 30529129 C T 25363768 FBRS 16 30679970 T C 25363768 SRCAP 16 30718664 G A 25363768 0.7286 deleterious SRCAP 16 30745033 TGACAGCGACTG T 25363768 SETD1A 16 30981006 G A 25363768 ITGAX 16 31384705 G A 25363768 ZNF423 16 49672661 C G 25363768 SNX20 16 50707926 T C 25363768 GNAO1 16 56388838 G A 25363768 0.4883 deleterious MMP15 16 58071464 C G 25363768 0.2405 neutral MMP15 16 58079116 C T 25363768 SLC38A7 16 58713960 C T 25363768 0.9623 deleterious CDH16 16 66946506 G C 25363768 EXOC3L1 16 67221481 C T 25363768 SLC9A5 16 67304643 A G 25363768 0.8297 deleterious ESRP2 16 68267732 GA G 25363768 ESRP2 16 68267734 AT A 25363768 CDH3 16 68721498 C G 25363768 0.2473 neutral TERF2 16 69404384 A G 25363768 WWP2 16 69967055 T C 25363768 AARS 16 70316681 C T 25363768 PKD1L3 16 71986760 ATAAG A 25363768 ADAMTS18 16 77327129 C T 25363768 CENPN 16 81056390 C T 25363768 HSD17B2 16 82101873 G C 25363768 0.939 deleterious KLHL36 16 84695527 C T 25363768 0.7592 deleterious ZDHHC7 16 85022492 A G 25363768 JPH3 16 87678589 G A 25363768 0.9901 deleterious ZNF469 16 88501044 G T 25363768 0.8819 deleterious CBFA2T3 16 88947174 C T 25363768 CPNE7 16 89655160 G A 25363768 FANCA 16 89816184 C T 25363768 0.056 neutral TUBB3 16 90001686 G A 25363768 0.8187 deleterious C16orf3 16 90095511 T A 25363768 C16orf3 16 90095512 G T 25363768 RPH3AL 17 69451 G A 25363768 GEMIN4 17 650797 G A 25363768 ABR 17 1003915 C T 25363768 0.9818 deleterious OR1A2 17 3101296 C A 25363768 0.4371 neutral ANKFY1 17 4086687 TCCTA T 25363768 MINK1 17 4789777 T C 25363768 0.9973 deleterious KIF1C 17 4905942 G A 25363768 KIAA0753 17 6499494 C T 25363768 0.5525 deleterious SLC13A5 17 6596494 AG A 25363768 ALOX12 17 6913580 C A 25363768 0.8358 deleterious POLR2A 17 7388093 G T 25363768 0.7136 deleterious DNAH2 17 7664160 G A 25363768 0.012 neutral DNAH2 17 7720741 G A 25363768 NTN1 17 9083262 C A 25363768 0.9875 deleterious MYH8 17 10296398 T G 25363768 ADPRM 17 10614330 A G 25363768 0.5333 deleterious RAI1 17 17699836 AG A 25363768 LLGL1 17 18137939 G A 25363768 LGALS9C 17 18380144 T C 25363768 FAM27L 17 21825494 G A 25363768 ATAD5 17 29167645 C G 25363768 0.2415 neutral TEFM 17 29227516 C T 25363768 0.2384 neutral MYO1D 17 31087364 G A 25363768 LIG3 17 33313013 CT C 25363768 SLFN12L 17 33806410 A G 25363768 TAF15 17 34171638 CTATGGTGGAGACAGAAGTGGGGGT C 25363768 CCL5 17 34205584 G C 25363768 0.6192 deleterious MYO19 17 34862997 G T 25363768 GPR179 17 36486981 G A 25363768 0.1151 neutral MED24 17 38178730 C T 25363768 0.9423 deleterious CCR7 17 38715177 C T 25363768 0.0046 neutral KRTAP1-3 17 39190953 G C 25363768 0.0093 neutral KRTAP1-3 17 39190954 G A 25363768 KRTAP9-8 17 39394306 G A 25363768 0.1808 neutral KRT38 17 39595033 G C 25363768 0.3005 neutral KRT16 17 39766665 A G 25363768 0.9928 deleterious CNP 17 40123912 G A 25363768 0.0865 neutral VPS25 17 40925870 C A 25363768 0.8818 deleterious BRCA1 17 41244230 A T 25363768 C17orf53 17 42225873 C T 25363768 UBTF 17 42284918 ATCCTCG A 25363768 ITGA2B 17 42451729 A G 25363768 0.9989 deleterious WFIKKN2 17 48917850 C T 25363768 0.5383 deleterious PCTP 17 53848508 T C 25363768 0.9432 deleterious NOG 17 54671662 C T 25363768 AKAP1 17 55183771 G A 25363768 0.1224 neutral MKS1 17 56285320 G A 25363768 0.6952 deleterious ACE 17 61566305 A G 25363768 0.6385 deleterious SCN4A 17 62029050 C T 25363768 0.0934 neutral TEX2 17 62272355 G C 25363768 PRKCA 17 64685129 C T 25363768 SLC9A3R1 17 72759634 G C 25363768 HID1 17 72954572 A T 25363768 ATP5H 17 73038261 G A 25363768 SLC16A5 17 73096566 G A 25363768 0.2471 neutral KIAA0195 17 73491637 C T 25363768 METTL23 17 74729178 TGAA T 25363768 RPTOR 17 78795992 G C 25363768 HGS 17 79662878 C T 25363768 FAM195B 17 79782297 G A 25363768 SLC16A3 17 80194100 C T 25363768 FOXK2 17 80540643 G C 25363768 ZNF750 17 80788018 T G 25363768 ZNF750 17 80789793 C T 25363768 0.2192 neutral EPB41L3 18 5398114 A G 25363768 0.1792 neutral LAMA1 18 7050797 G A 25363768 0.3161 neutral RAB31 18 9815108 T C 25363768 TUBB6 18 12325217 G C 25363768 LAMA3 18 21427428 C T 25363768 0.3486 neutral KLHL14 18 30260416 G A 25363768 0.9887 deleterious SYT4 18 40854059 G A 25363768 0.0604 neutral SETBP1 18 42532022 C G 25363768 0.5912 deleterious POLI 18 51795993 T C 25363768 0.821 deleterious ATP8B1 18 55342226 G C 25363768 ATP8B1 18 55342229 A G 25363768 NEDD4L 18 55816832 T G 25363768 TSHZ1 18 72999663 G A 25363768 MADCAM1 19 501831 G C 25363768 0.0052 neutral HCN2 19 615843 C G 25363768 0.6528 deleterious ABCA7 19 1063613 G A 25363768 0.9867 deleterious MRPL54 19 3767317 C T 25363768 0.4495 neutral ZFR2 19 3819169 G C 25363768 0.9845 deleterious PIAS4 19 4013122 C A 25363768 0.4429 neutral PIAS4 19 4013176 G A 25363768 0.1171 neutral SIRT6 19 4177045 GCCCCCA G 25363768 CHAF1A 19 4423882 G A 25363768 UBXN6 19 4446075 C T 25363768 0.1259 neutral LRG1 19 4538513 G A 25363768 UHRF1 19 4932922 C T 25363768 PTPRS 19 5216793 C CA 25363768 PTPRS 19 5218803 G A 25363768 PTPRS 19 5218842 G A 25363768 INSR 19 7119480 G A 25363768 CERS4 19 8320764 G A 25363768 KANK3 19 8387815 A G 25363768 ANGPTL4 19 8434160 T G 25363768 0.7712 deleterious PRAM1 19 8555752 C CT 25363768 ADAMTS10 19 8645777 CTAGTGGCCA C 25363768 MUC16 19 9060456 G T 25363768 0.0024 neutral MUC16 19 9084772 G C 25363768 0.0156 neutral ZNF559 19 9451802 A T 25363768 0.0067 neutral ZNF560 19 9577895 T G 25363768 0.0402 neutral FBXL12 19 9921616 T C 25363768 0.1084 neutral EIF3G 19 10226353 T C 25363768 EIF3G 19 10226354 G A 25363768 PDE4A 19 10534417 T C 25363768 LDLR 19 11218109 G A 25363768 0.9484 deleterious ELAVL3 19 11577075 T A 25363768 0.5532 deleterious ZNF627 19 11725441 G A 25363768 0.8959 deleterious ZNF44 19 12384769 C T 25363768 0.0336 neutral ZSWIM4 19 13915878 G A 25363768 0.4985 neutral CYP4F12 19 15794447 T C 25363768 MED26 19 16687978 G T 25363768 SIN3B 19 16973723 C T 25363768 0.3023 neutral CPAMD8 19 17104231 G T 25363768 0.0589 neutral ISYNA1 19 18546538 CCCCGCG C 25363768 CRTC1 19 18870899 G C 25363768 CRTC1 19 18886533 C T 25363768 0.3641 neutral PBX4 19 19680287 C T 25363768 0.9537 deleterious ZNF681 19 23927743 A C 25363768 0.9876 deleterious CEBPG 19 33870437 A C 25363768 0.7464 deleterious LSR 19 35758697 C G 25363768 SBSN 19 36018849 G T 25363768 0.6889 deleterious KMT2B 19 36218664 C T 25363768 IGFLR1 19 36230667 G A 25363768 0.3387 neutral NFKBID 19 36379495 CTCT C 25363768 ZNF345 19 37368889 T C 25363768 0.0002 neutral WDR87 19 38377481 T C 25363768 0.1467 neutral GGN 19 38876253 T G 25363768 0.027 neutral RASGRP4 19 38901907 C G 25363768 MAP4K1 19 39086584 A G 25363768 0.5681 deleterious SARS2 19 39406847 G A 25363768 PLEKHG2 19 39912757 C T 25363768 RPS16 19 39926368 CAG C 25363768 CEACAM7 19 42187993 C T 25363768 ZNF526 19 42730427 G A 25363768 0.2065 neutral PSG11 19 43529205 A G 25363768 0.0568 neutral CD177 19 43864537 C T 25363768 ZNF230 19 44513286 AT A 25363768 ZNF235 19 44792636 G A 25363768 0.8725 deleterious BCAM 19 45322090 C G 25363768 DMPK 19 46273858 A G 25363768 0.0584 neutral PPP5C 19 46893372 C T 25363768 0.2661 neutral GLTSCR2 19 48255802 GCACC G 25363768 SULT2A1 19 48386827 C A 25363768 GRWD1 19 48954314 C T 25363768 PLEKHA4 19 49351271 C T 25363768 PNKP 19 50367560 C G 25363768 KLK1 19 51323488 C T 25363768 0.0423 neutral ZNF665 19 53669453 T C 25363768 0.0241 neutral CNOT3 19 54647460 T C 25363768 0.7714 deleterious LILRA1 19 55107336 C T 25363768 LILRA1 19 55107343 T C 25363768 0.0027 neutral NLRP7 19 55442030 G A 25363768 SSC5D 19 56029616 C A 25363768 0.1658 neutral ZNF460 19 57803573 T A 25363768 0.0506 neutral ZNF772 19 57988620 G T 25363768 ZNF530 19 58117413 G A 25363768 0.182 neutral ZNF329 19 58651151 A G 25363768 ZBTB45 19 59028486 TGGG T 25363768 C20orf96 20 259956 C A 25363768 0.0396 neutral TGM3 20 2321207 T C 25363768 0.1609 neutral HSPA12B 20 3729976 A G 25363768 JAG1 20 10653553 C T 25363768 ESF1 20 13750531 A AG 25363768 SLC24A3 20 19664943 C G 25363768 0.9948 deleterious ACSS1 20 24993472 C A 25363768 NINL 20 25459809 T A 25363768 FOXS1 20 30432906 G A 25363768 0.5142 deleterious TM9SF4 20 30732948 C T 25363768 0.1803 neutral ASXL1 20 30959942 A T 25363768 ITCH 20 33037307 A G 25363768 GGT7 20 33449275 C A 25363768 0.052 neutral ERGIC3 20 34130278 A G 25363768 0.8567 deleterious RBM12 20 34243229 G A 25363768 0.0185 neutral RBM39 20 34309816 A G 25363768 RBM39 20 34313085 G C 25363768 RALGAPB 20 37150314 A G 25363768 0.933 deleterious CHD6 20 40143580 C T 25363768 0.7992 deleterious RBPJL 20 43942709 G A 25363768 MMP9 20 44639765 C T 25363768 SULF2 20 46292275 T C 25363768 0.5254 deleterious SALL4 20 50407792 G A 25363768 ADRM1 20 60883795 AGG A 25363768 EEF1A2 20 62120390 C T 25363768 0.8102 deleterious HELZ2 20 62198437 G A 25363768 TPTE 21 10908913 T A 25363768 NRIP1 21 16338241 T A 25363768 0.6433 deleterious GRIK1 21 30959815 A G 25363768 0.9735 deleterious TIAM1 21 32869814 G A 25363768 URB1 21 33757868 G A 25363768 IGSF5 21 41137773 G A 25363768 0.2003 neutral DSCAM 21 41414330 A AT 25363768 DSCAM 21 41457640 T TTA 25363768 ZBTB21 21 43412590 C T 25363768 0.7605 deleterious WDR4 21 44272360 C T 25363768 NDUFV3 21 44323370 C T 25363768 0.4547 neutral SIK1 21 44839867 A T 25363768 0.9988 deleterious SIK1 21 44840121 G A 25363768 0.8875 deleterious PFKL 21 45742909 C CT 25363768 C21orf2 21 45750792 G A 25363768 KRTAP10-2 21 45971357 A C 25363768 KRTAP10-5 21 46000044 G A 25363768 0.3197 neutral KRTAP10-5 21 46000045 C T 25363768 LOC642852 21 46714226 C T 25363768 LSS 21 47641795 G A 25363768 PCNT 21 47754471 G A 25363768 0.0005 neutral PCNT 21 47860001 G A 25363768 TSSK2 22 19119619 C T 25363768 0.9496 deleterious ARVCF 22 19965564 G A 25363768 MIR185 22 20020667 G A 25363768 SLC7A4 22 21385337 G A 25363768 TOP3B 22 22328718 GA G 25363768 LOC96610 22 22677176 T C 25363768 LOC96610 22 22677176 T C 25363768 LOC96610 22 22677176 T C 25363768 LOC96610 22 22677176 T C 25363768 LOC96610 22 22677176 T C 25363768 LOC96610 22 22677182 C A 25363768 LOC96610 22 22677182 C A 25363768 LOC96610 22 22677182 C A 25363768 IGLL5 22 23235930 G A 25363768 0.0837 neutral IGLL1 22 23917192 G T 25363768 0.0133 neutral SGSM1 22 25246264 G T 25363768 0.3547 neutral ADRBK2 22 26118282 G C 25363768 0.641 deleterious TTC28 22 28395403 A G 25363768 NEFH 22 29884893 C G 25363768 0.1959 neutral LARGE 22 34009951 G A 25363768 TEX33 22 37398011 G A 25363768 0.0149 neutral C22orf23 22 38340530 C G 25363768 DMC1 22 38917681 A G 25363768 MKL1 22 40816525 T C 25363768 0.0018 neutral ST13 22 41231637 G C 25363768 0.0257 neutral SREBF2 22 42299006 G A 25363768 SCUBE1 22 43607047 C T 25363768 0.9126 deleterious SAMM50 22 44364589 T G 25363768 SAMM50 22 44372025 C T 25363768 WNT7B 22 46372611 C T 25363768 CDPF1 22 46643133 A T 25363768 CDPF1 22 46643134 T G 25363768 CDPF1 22 46643135 G C 25363768 TRABD 22 50633461 G A 25363768 0.4721 deleterious PLXNB2 22 50727283 A C 25363768 0.0067 neutral PPP6R2 22 50857408 C T 25363768 0.5368 deleterious SLC25A6 X 1508377 A AG 25363768 VCX3B X 8434419 G A 25363768 0.0869 neutral TXLNG X 16847829 A T 25363768 0.4665 deleterious CXorf23 X 19947974 G A 25363768 0.1347 neutral ARX X 25031277 C T 25363768 0.048 neutral CHDC2 X 36116898 TTTTAA T 25363768 TSPAN7 X 38420765 T TGCC 25363768 USP9X X 41025217 A T 25363768 0.9798 deleterious USP11 X 47100661 C T 25363768 SUV39H1 X 48555155 T A 25363768 PRICKLE3 X 49032285 G A 25363768 0.0515 neutral PRICKLE3 X 49034380 C T 25363768 0.1997 neutral CCDC22 X 49105278 A C 25363768 0.0074 neutral CCNB3 X 50085212 G T 25363768 0.938 deleterious PHF8 X 54037669 G A 25363768 0.0974 neutral TRO X 54949846 C T 25363768 0.024 neutral PFKFB1 X 54978349 G A 25363768 0.6017 deleterious AR X 66943674 C T 25363768 DGAT2L6 X 69421748 C T 25363768 0.6812 deleterious NLGN3 X 70375069 C T 25363768 0.9292 deleterious NLGN3 X 70389790 G A 25363768 0.997 deleterious PABPC1L2B X 72223742 CG C 25363768 PABPC1L2A X 72298960 AC A 25363768 TBX22 X 79277939 G T 25363768 TBX22 X 79279657 G A 25363768 0.9667 deleterious NRK X 105190409 A G 25363768 0.268 neutral RIPPLY1 X 106145431 C T 25363768 CT47B1 X 120009146 G T 25363768 0.1862 neutral DCAF12L1 X 125685718 C T 25363768 0.0019 neutral XPNPEP2 X 128894535 C T 25363768 OR13H1 X 130678860 G A 25363768 FAM127A X 134167161 G A 25363768 SAGE1 X 134988656 C T 25363768 0.106 neutral ATP11C X 138864752 T A 25363768 0.7901 deleterious MAGEC1 X 140994381 C G 25363768 0.0001 neutral MAGEA8 X 149013698 C T 25363768 0.0029 neutral PASD1 X 150842415 G A 25363768 MAGEA3 X 151935240 C A 25363768 0.1146 neutral MAGEA3 X 151935244 A G 25363768 0.0026 neutral SLC6A8 X 152959900 C T 25363768 OPN1LW X 153416315 A G 25363768 GAB3 X 153908482 G A 25363768 0.0848 neutral F8 X 154227738 A G 25363768 ADNP 20 49510224 C CA 25418537 CHD1 5 98208223 C T 25418537 0.8312 deleterious CHD2 15 93524060 TAAAG T 25418537 CHD2 15 93563244 C T 25418537 CHD2 15 93563256 C T 25418537 CHD2 15 93563282 T TG 25418537 CHD8 14 21868219 G A 25418537 0.9942 deleterious CHD8 14 21899168 C T 25418537 0.2741 neutral CHD8 14 21876489 C T 25418537 0.5628 deleterious CHD8 14 21882516 G T 25418537 0.9662 deleterious CHD8 14 21862535 G A 25418537 CHD8 14 21865980 A T 25418537 CHD8 14 21867866 T G 25418537 CNOT3 19 54649666 T TC 25418537 CNOT3 19 54647460 T C 25418537 0.7714 deleterious CSDE1 1 115268874 A G 25418537 0.2936 neutral DSCAM 21 41457527 A T 25418537 EIF2C1/AGO1 1 36360835 GG AA 25418537 EIF2C1/AGO1 1 36367566 C G 25418537 EPRS 1 220195788 C T 25418537 0.9997 deleterious EVL 14 100551047 G A 25418537 0.6416 deleterious GPRASP1 X 101912889 A G 25418537 0.1421 neutral GRIN2B 12 13768129 A C 25418537 0.9369 deleterious MED13L 12 116424952 C T 25418537 MED13L 12 116429238 T C 25418537 0.8739 deleterious MYT1L 2 1921079 A G 25418537 0.9774 deleterious NCKAP1 2 183866861 C CCA 25418537 NFIA 1 61818236 C T 25418537 0.0311 neutral NRXN1 2 50733692 C T 25418537 0.5914 deleterious NRXN1 2 50170866 AG A 25418537 NRXN1 2 51254825 G T 25418537 0.2804 neutral NRXN1 2 50149217 G C 25418537 PAX5 9 37020768 A AC 25418537 PPP2R5D 6 42978887 A G 25418537 0.4696 neutral PTEN 10 89692790 G A 25418537 0.4072 neutral PTEN 10 89692818 T C 25418537 0.9968 deleterious PTEN 10 89692836 A T 25418537 0.9954 deleterious RALGAPA1 14 36133877 C T 25418537 0.0723 neutral SETD5 3 9477532 A G 25418537 0.9636 deleterious SETD5 3 9517475 T G 25418537 0.4971 deleterious SETDB2 13 50056886 C G 25418537 0.2024 neutral SHANK3 22 51159850 A G 25418537 0.0189 neutral SHANK3 22 51159932 T TG 25418537 SLC6A1 3 11076337 G A 25418537 0.9875 deleterious SLC6A1 3 11067982 T C 25418537 0.9973 deleterious SYNGAP1 6 33403326 G A 25418537 0.9946 deleterious SYNGAP1 6 33399974 CA C 25418537 SYNGAP1 6 33408650 CTT C 25418537 SYNGAP1 6 33408610 TC T 25418537 TBR1 2 162276743 A G 25418537 0.9691 deleterious TBR1 2 162274307 G T 25418537 0.9874 deleterious TCF7L2 10 114901076 G A 25418537 TERF2 16 69401013 G C 25418537 0.2364 neutral TRIP12 2 230636299 G A 25418537 0.825 deleterious TRIP12 2 230650558 C T 25418537 0.5859 deleterious TRIP12 2 230666966 AC A 25418537 TUBGCP4 15 43692324 C T 25418537 0.1816 neutral VCP 9 35057454 C T 25418537 0.9991 deleterious WDR33 2 128522378 G A 25418537 0.9398 deleterious RERE 1 8421289 G A 25961944 NFIA 1 61818236 C T 25961944 0.0311 neutral CYB561D1 1 110038457 G T 25961944 PEX11B 1 145517271 A G 25961944 ASH1L 1 155317482 C CCTTG 25961944 PYHIN1 1 158906752 A G 25961944 0.026 neutral ATP1B1 1 169094277 G A 25961944 0.0101 neutral EPHX1 1 226026444 G A 25961944 0.9151 deleterious CPSF3 2 9588447 A C 25961944 0.9264 deleterious FOXI3 2 88751635 C G 25961944 HECW2 2 197084846 T C 25961944 0.5952 deleterious FN1 2 216251636 T G 25961944 0.4875 neutral GIGYF2 2 233712061 C G 25961944 0.768 deleterious XIRP1 3 39230164 C T 25961944 0.9427 deleterious RAB43 3 128840285 A T 25961944 0.0628 neutral AASDH 4 57248651 G GT 25961944 TET2 4 106155888 G T 25961944 0.8304 deleterious CDH10 5 24492972 GA G 25961944 PTGER4 5 40692019 G T 25961944 0.9813 deleterious GPR98 5 90144469 A G 25961944 P4HA2 5 131543433 T A 25961944 0.982 deleterious SEC24A 5 134059281 CC AG 25961944 0.3635 neutral GNPDA1 5 141384600 A G 25961944 0.3759 neutral RBM27 5 145603023 C T 25961944 0.4695 deleterious HMMR 5 162917425 T TA 25961944 CUL7 6 43011218 G A 25961944 0.1183 neutral PKHD1 6 51618094 A G 25961944 0.9919 deleterious PHF3 6 64423108 C T 25961944 0.0188 neutral PEG10 7 94293229 G A 25961944 0.3664 neutral GIGYF1 7 100279943 A G 25961944 SSPO 7 149519648 C T 25961944 0.0647 neutral TBC1D31 8 124113166 T A 25961944 0.3109 neutral ZNF462 9 109691619 C T 25961944 0.4106 neutral ITGB1 10 33200439 G A 25961944 0.637 deleterious C10orf71 10 50534797 G A 25961944 0.2199 neutral PHRF1 11 610966 C G 25961944 0.0079 neutral GALNT18 11 11314679 TCATCCACGGTG TGT 25961944 SF3B2 11 65822676 C T 25961944 0.8841 deleterious TBCEL 11 120926018 G T 25961944 NAV3 12 78511923 G T 25961944 0.2031 neutral DNAH10 12 124303750 G A 25961944 0.0825 neutral XPO4 13 21370323 G A 25961944 FAM177A1 14 35548132 G A 25961944 CCDC88C 14 91744403 G C 25961944 0.0868 neutral DYNC1H1 14 102446851 C T 25961944 0.9772 deleterious CDC42BPB 14 103405969 T C 25961944 0.9787 deleterious DMXL2 15 51766611 C T 25961944 0.1997 neutral CGNL1 15 57815788 G T 25961944 0.3128 neutral KBTBD13 15 65369229 G A 25961944 0.5444 deleterious ANP32A 15 69080207 CTTCGAGTTTGCCTTCA C 25961944 KLHL25 15 86311780 G A 25961944 0.1766 neutral LYSMD4 15 100272044 T C 25961944 0.4239 neutral SLC9A3R2 16 2086460 C T 25961944 0.6155 deleterious ESRP2 16 68267733 AAT A 25961944 WWP2 16 69922119 C T 25961944 0.023 neutral FAM92B 16 85143894 G A 25961944 0.9544 deleterious ZC3H18 16 88691091 C CAAGCCAGGAGACCCTCGGG 25961944 C16orf3 16 90095511 TG AT 25961944 NLGN2 17 7318418 C T 25961944 0.9824 deleterious SCN4A 17 62049125 G A 25961944 0.9999 deleterious RNF213 17 78263533 G A 25961944 0.1434 neutral CELF4 18 34855162 C A 25961944 NFATC1 18 77160481 T G 25961944 RPS15 19 1438831 G T 25961944 0.9483 deleterious BRD4 19 15353791 G A 25961944 0.3034 neutral BRD4 19 15375549 T C 25961944 0.9625 deleterious GRIK5 19 42546852 C T 25961944 0.3877 neutral ZNF226 19 44679683 C T 25961944 SHANK1 19 51169513 C T 25961944 0.0388 neutral BRSK1 19 55805700 GA G 25961944 ZBTB45 19 59028431 CAG C 25961944 KIAA1755 20 36869368 C T 25961944 0.0673 neutral MYBL2 20 42343883 TG T 25961944 ATF4 22 39917832 TC T 25961944 OFD1 X 13774696 G T 25961944 CYLC1 X 83128308 A T 25961944 PLXNA3 X 153692845 G A 25961944 ALDH1A3 15 101454953 T C 26352270 0.7137 deleterious FOXN1 17 26851543 C T 26352270 0.8526 deleterious NR4A2 2 157186342 C A 26352270 GAS8-AS1 16 90095617 G GCTGCGGGGCAGC 26352270 TMLHE X 154770750 26749308 DSCAM 21 42016189 26749308 CACNA2D4 12 1948914 26749308 ARID1B 6 157315964 26749308 CSRNP3 2 166253120 26749308 DISC1 1 231828151 26749308 MBD5 2 149051133 26749308 CHRND 2 233396326 G A 26749308 0.1232 neutral SUV420H1 11 67926275 G A 26749308 0.5290 neutral PIK3CA 3 178916936 G A 26749308 0.9073 deleterious WNT7A 3 13920617 26749308 NR3C2 4 148986808 G A 26749308 TCF7L2 10 114901076 G A 26749308 ARID1B 6 157401254 C A 26749308 LOC101929653 11 131345836 26749308 RBFOX1 16 6908075 26749308 TRIO 5 14015350 26749308 SNRPN 15 25088705 26749308 IKBIP 12 99020493 T C 26749308 0.0226 neutral SAE1 19 47635921 26749308 PYHIN1 1 159038053 T C 26749308 GRIA1 5 153030052 G A 26749308 0.1694 neutral CANX 5 179122573 26749308 CBL 11 119148951 G A 26749308 0.6375 deleterious FAF2 5 175921055 A G 26749308 0.9066 deleterious GNAI1 7 79840305 A G 26749308 0.7869 deleterious PRKCA 17 64410805 C T 26749308 ABCA3 16 2334337 26582266 ARHGAP19 10 98994997 26582266 CAMSAP3 19 7677972 26582266 DDX50 10 70694112 26582266 ECSIT 19 11618318 26582266 ENO3 17 4859881 26582266 FAHD1 16 1877625 26582266 FAHD1 16 1877669 26582266 HERC1 15 63927042 26582266 ITGA10 1 145536118 26582266 LARP1 5 154193454 26582266 NUP205 7 135333246 26582266 OBSCN 1 228476583 26582266 OR6P1 1 158533157 26582266 OSMR 5 38869177 26582266 PCNX 14 71555961 26582266 PEAK1 15 77472860 26582266 PLEKHA4 19 49355561 26582266 POGZ 1 151378386 26582266 POLR1E 9 37498215 26582266 PPCS 1 42925473 26582266 PRKD2 19 47207870 26582266 RPP40 6 4996306 26582266 SERPINB7 18 61471655 26582266 SLC41A2 12 105198950 26582266 WDR20 14 102675594 26582266 WNK2 9 96069086 26582266 YAF2 12 42629785 26582266 ZFHX3 16 72845532 26582266 ZFPM2 8 106813565 26582266 FRRS1 1 100214124 26582266 NECAP2 1 16778330 26582266 SMO 7 128851858 26582266 AMPH 7 38431556 26582266 DNAJC16 1 15888805 26582266 GCN1L1 12 120591701 26582266 LRP1B 2 141609318 26582266 ERVMER34-1 4 53610949 26582266 SLC4A1 17 42335477 G A 27525107 0.9884 deleterious EDEM3 1 184706797 G A 27525107 RPRD1A 18 33611043 C A 27525107 0.7899 deleterious IGF2R 6 160499238 G A 27525107 SRRM2 16 2813215 C T 27525107 0.1135 neutral C20orf132 20 35788537 T G 27525107 RBM19 12 114362501 C T 27525107 KCTD1 18 24060769 T C 27525107 EIF4E 4 99812415 T A 27525107 0.9944 deleterious CASP14 19 15166323 T C 27525107 TET2 4 106157491 G A 27525107 0.0824 neutral ASAP2 2 9463296 A T 27525107 0.322 neutral ZNF844 19 12185210 G A 27525107 UBE3C 7 157041159 C T 27525107 0.9207 deleterious FAM117B 2 203560677 T C 27525107 PCDHGA6 5 140754841 A G 27525107 CNST 1 246810623 C T 27525107 0.9785 deleterious NLRP4 19 56370219 A C 27525107 0.2426 neutral FAM40B 7 129125422 A T 27525107 ST8SIA1 12 22441355 G A 27525107 ST8SIA1 12 22441359 G A 27525107 LRRC30 18 7231443 G T 27525107 0.9725 deleterious UQCC 20 33969789 T C 27525107 SEPT5 22 19707757 G A 27525107 0.2954 neutral DESI1 22 42003310 C A 27525107 0.5152 deleterious MYCBP2 13 77831901 C T 27525107 0.0379 neutral SNX33 15 75942562 C T 27525107 PRDM14 8 70964491 C A 27525107 0.9986 deleterious ZMYM6 1 35453426 C T 27525107 0.2526 neutral CCDC141 2 179783568 C T 27525107 0.0095 neutral PPFIA1 11 70194448 G A 27525107 PCNP 3 101316414 C T 27525107 PCNP 3 101316415 T G 27525107 TRPM6 9 77353334 A T 27525107 FBRS 16 30676715 A C 27525107 0.5129 deleterious NR5A1 9 127262722 C T 27525107 0.6208 deleterious SLIT2 4 20490587 C T 27525107 NFASC 1 204955245 A T 27525107 ASPM 1 197111815 T G 27525107 0.0539 neutral ZNF790 19 37310285 G A 27525107 MAP1LC3B 16 87436582 A G 27525107 0.4642 deleterious ACAP3 1 1235431 G A 27525107 ZNF646 16 31091869 G A 27525107 JARID2 6 15504762 G A 27525107 0.0832 neutral RBM19 12 114352870 C T 27525107 0.029 neutral CAND2 3 12861637 G A 27525107 ADNP2 18 77895382 T G 27525107 0.9634 deleterious SCGB1D1 11 61959705 C T 27525107 0.0012 neutral ADRA2B 2 96780980 C T 27525107 TARS 5 33458697 A G 27525107 CDK14 7 90355990 G A 27525107 0.9166 deleterious RIC3 11 8148296 T C 27525107 0.05 neutral PDCD6IP 3 33868145 C A 27525107 0.024 neutral ADAM30 1 120438252 A T 27525107 NLRP7 19 55450865 T C 27525107 0.3543 neutral BZRAP1 17 56404969 C A 27525107 GFM1 3 158380348 A T 27525107 PTCH1 9 98221922 G A 27525107 SFMBT2 10 7213014 G A 27525107 0.0109 neutral ARHGEF28 5 73144882 C T 27525107 0.2981 neutral LOC642852 21 46714389 G T 27525107 LOC642852 21 46714390 A T 27525107 CDH18 5 19473795 C T 27525107 0.2473 neutral PPP1R9B 17 48213378 C T 27525107 C19orf26 19 1235958 C T 27525107 DAPK1 9 90301541 C T 27525107 0.0817 neutral MYH4 17 10355401 T C 27525107 0.9986 deleterious LEPREL1 3 189838228 G A 27525107 CENPJ 13 25486801 G C 27525107 0.2085 neutral JAG2 14 105617992 G A 27525107 0.2807 neutral GALNT14 2 31168706 C T 27525107 0.0342 neutral OLFM1 9 138011670 C T 27525107 NRXN1 2 50733692 C T 27525107 0.5914 deleterious NEB 2 152424685 T C 27525107 0.6034 deleterious MYOM1 18 3067506 C T 27525107 PLCH2 1 2434058 C T 27525107 0.0522 neutral AHNAK2 14 105423832 G A 27525107 0.4526 neutral AP3B2 15 83348481 C G 27525107 0.6582 deleterious LONP1 19 5713148 C G 27525107 0.1468 neutral SHANK2 11 70336411 G A 27525107 ALDH6A1 14 74533566 C G 27525107 0.931 deleterious FANCE 6 35425695 G A 27525107 ZP2 16 21214376 A T 27525107 ZP2 16 21214377 C T 27525107 GABRA2 4 46258318 A T 27525107 0.4142 deleterious SLC6A1 3 11067982 T C 27525107 0.9973 deleterious SPEN 1 16258127 C T 27525107 DPH1 17 1943117 G T 27525107 0.9801 deleterious TCERG1L 10 132965082 C T 27525107 0.0169 neutral PRKCE 2 45910260 T C 27525107 PRKCE 2 45910289 T C 27525107 DNAH5 5 13714585 G A 27525107 0.8673 deleterious VAV2 9 136633668 C T 27525107 0.9262 deleterious NPTN 15 73862669 G A 27525107 CDC23 5 137524696 G A 27525107 0.8967 deleterious LIMA1 12 50570945 C G 27525107 0.3381 neutral CTDP1 18 77464903 C A 27525107 0.6058 deleterious PABPC1L 20 43545506 G A 27525107 0.7515 deleterious NECAB1 8 91821724 G A 27525107 NECAB1 8 91821744 T C 27525107 CTTNBP2NL 1 112999487 G A 27525107 0.9747 deleterious SEMA4B 15 90763059 C T 27525107 0.0023 neutral RNF40 16 30778067 C T 27525107 EXOC4 7 133689775 A G 27525107 0.9235 deleterious ADCY6 12 49168253 G A 27525107 0.6341 deleterious IMPDH2 3 49064457 C G 27525107 0.1613 neutral ITK 5 156679654 G A 27525107 0.4986 deleterious KIF2C 1 45214051 C G 27525107 AGBL4 1 49899272 A G 27525107 ST6GALNAC3 1 76550237 T C 27525107 DNM3 1 172084189 A G 27525107 ATP2B4 1 203596409 A G 27525107 SLC26A9 1 205894856 C T 27525107 LOC100132987 10 80321645 C T 27525107 KIAA1598 10 118700511 T C 27525107 C11orf74 11 38289233 C T 27525107 OR4A5 11 51487490 C T 27525107 NOX4 11 89159108 A G 27525107 TBC1D30 12 65269243 C T 27525107 0.002 neutral LINC00366 13 39193399 G A 27525107 OR7E156P 13 65747083 T C 27525107 PPM1A 14 60754950 A G 27525107 KCNH5 14 63301375 C T 27525107 CEP128 14 81413266 G A 27525107 FAM189A1 15 29718700 C T 27525107 C15orf59 15 74156205 G C 27525107 LOC283867 16 65609464 C G 27525107 TERF2IP 16 76191098 C A 27525107 CCDC137 17 79635638 G A 27525107 LINC00470 18 1794249 T G 27525107 CTAGE1 18 20266482 A T 27525107 LOC643542 18 66325763 G A 27525107 PEG3 19 57322607 A C 27525107 GKN2 2 69188286 T C 27525107 FHL2 2 106076320 G C 27525107 CXCR4 2 137490484 T C 27525107 LOC100144595 2 155332366 G A 27525107 PTPRT 20 42082225 C T 27525107 NCOA3 20 46165011 C T 27525107 PLSCR4 3 146107178 T G 27525107 ZCCHC4 4 25350626 G A 27525107 INTU 4 128637320 A G 27525107 PABPC4L 4 135420890 G C 27525107 LINC00499 4 139728418 G A 27525107 GYPA 4 145357639 C G 27525107 GYPA 4 145358759 A T 27525107 RAB3C 5 58156183 G C 27525107 KCTD16 5 143814440 C A 27525107 BNIP1 5 172608287 G A 27525107 C6orf228 6 11100341 T C 27525107 HDAC9 7 18885284 A G 27525107 KCND2 7 119973863 G A 27525107 CSMD1 8 5644364 A T 27525107 BLK 8 11420448 C T 27525107 WRN 8 31318573 G T 27525107 FAM75D1 9 85119714 T C 27525107 DNMT3A 2 25466800 G A 27525107 0.3113 neutral CLCNKB 1 16376358 C G 27525107 0.2456 neutral COPS2 15 49426143 G A 27525107 0.998 deleterious COL7A1 3 48621941 G A 27525107 0.329 neutral DCAKD 17 43111636 G T 27525107 S100A11 1 152012714 G A 27525107 S100A11 1 152012715 C T 27525107 AHRR 5 422895 C G 27525107 0.3953 deleterious VIP 6 153075412 T A 27525107 LOC283710 15 31527371 A C 27525107 LOC283710 15 31527373 C A 27525107 MOV10 1 113235478 G A 27525107 0.105 neutral ESRRG 1 217016603 T A 27525107 MAP4 3 47957453 T C 27525107 0.0103 neutral SLIT3 5 168175351 C A 27525107 KIAA0284 14 105354151 G A 27525107 SLK 10 105768025 C T 27525107 0.935 deleterious LRRC4 7 127670456 G C 27525107 0.9764 deleterious LRGUK 7 133842813 A G 27525107 CAPRIN1 11 34107924 C T 27525107 PYDC2 3 191286856 C T 27525107 PYDC2 3 191286870 A T 27525107 HCAR1 12 123213933 G A 27525107 CCDC19 1 159846398 C T 27525107 SFTPD 10 81702258 G A 27525107 0.6319 deleterious SNX5 20 17923824 T C 27525107 0.5007 deleterious SOX7 8 10583692 C T 27525107 ZFPL1 11 64852255 G A 27525107 0.3114 neutral NAV1 1 201687561 C A 27525107 0.8286 deleterious MICAL3 22 18387403 T C 27525107 0.9836 deleterious DCAF13 8 104439424 T G 27525107 0.005 neutral LAMC3 9 133942350 G A 27525107 0.672 deleterious SYNE1 6 152771947 G A 27525107 0.3053 neutral KIAA1217 10 24802273 T C 27525107 0.5963 deleterious FAT3 11 92600180 G A 27525107 0.5186 deleterious STXBP5L 3 120628487 G A 27525107 0.0015 neutral ARID2 12 46233500 T A 27525107 ARID2 12 46233502 C A 27525107 ARL6IP6 2 153575211 C G 27525107 0.0134 neutral CPLX2 5 175261745 C A 27525107 CPLX2 5 175261746 G A 27525107 MIR4470 8 63043069 G T 27525107 MIR4470 8 63043070 A T 27525107 SEC61A1 3 127786872 G A 27525107 0.999 deleterious PPARD 6 35389613 C T 27525107 0.9537 deleterious IRX4 5 2258056 T G 27525107 IRX4 5 2258057 C T 27525107 GBE1 3 82014605 A T 27525107 GBE1 3 82014614 T A 27525107 SLC6A2 16 55703492 C T 27525107 0.9316 deleterious UBR5 8 103300396 C T 27525107 FANCM 14 45650888 C T 27525107 0.0121 neutral NPBWR2 20 62737215 G A 27525107 0.9034 deleterious KCNJ6 21 39087336 T C 27525107 0.325 neutral DNAH2 17 7699902 G A 27525107 0.0658 neutral AGRN 1 981205 T C 27525107 0.9994 deleterious TMEM52 1 1849366 C T 27525107 ZBTB4 17 7369185 C T 27525107 RASEF 9 85677691 T C 27525107 0.0628 neutral UPF1 19 18962981 C T 27525107 0.8804 deleterious PAN2 12 56721172 G A 27525107 0.9735 deleterious RNF103 2 86849967 G A 27525107 DDX27 20 47850144 C T 27525107 0.5012 neutral MPP7 10 28394712 G A 27525107 MPP7 10 28394713 G A 27525107 AP1G2 14 24034327 C T 27525107 RAB11FIP5 2 73339563 G A 27525107 0.918 deleterious VPRBP 3 51457792 T C 27525107 0.3925 neutral SLC2A2 3 170720420 G A 27525107 0.1029 neutral NUDT17 1 145589057 T A 27525107 ETV3 1 157094760 G C 27525107 0.9441 deleterious NET1 10 5498175 G A 27525107 RNF40 16 30778120 C T 27525107 0.9609 deleterious FASN 17 80046737 C G 27525107 0.9735 deleterious PFKFB3 10 6263395 C T 27525107 0.5932 deleterious APBA2 15 29346334 G A 27525107 0.879 deleterious SUPT6H 17 27003318 A G 27525107 0.2066 neutral CDYL2 16 80667073 G A 27525107 0.1091 neutral TAF6 7 99711376 T C 27525107 0.2797 neutral SECISBP2 9 91964798 C G 27525107 0.1125 neutral RRP8 11 6622574 C T 27525107 0.6662 deleterious GRAMD1C 3 113656968 C T 27525107 0.0888 neutral GPR151 5 145905716 C A 27525107 GPR151 5 145905719 G A 27525107 PTPRT 20 41385165 G A 27525107 0.9841 deleterious SLC38A10 17 79225309 C T 27525107 CRYGS 3 186256586 G A 27525107 0.9223 deleterious WISP3 6 112389528 A G 27525107 0.2043 neutral EXPH5 11 108384403 T C 27525107 0.0048 neutral ACTR5 20 37380784 A G 27525107 0.6204 deleterious MIMT1 19 57359668 C T 27525107 MIMT1 19 57359669 G A 27525107 ANGPT1 8 108648303 G T 27525107 ANGPT1 8 108648304 A T 27525107 TRIM17 1 228598833 C T 27525107 SCN7A 2 167284437 G T 27525107 0.3571 neutral CDC42EP4 17 71281677 G A 27525107 WDFY4 10 50174653 C T 27525107 0.0047 neutral TAF5 10 105147781 T A 27525107 0.9991 deleterious KIAA0284 14 105353348 G A 27525107 ZMYM4 1 35852825 A T 27525107 0.58 deleterious AQP10 1 154296135 C A 27525107 0.2143 neutral GPR132 14 105554707 G A 27525107 GPR132 14 105554708 C G 27525107 NPC1 18 21134914 G A 27525107 0.0324 neutral RIPK1 6 3083327 C G 27525107 0.9989 deleterious DAAM1 14 59782064 G A 27525107 0.9937 deleterious CNIH3 1 224957399 G A 27525107 CNIH3 1 224957400 G A 27525107 CSPP1 8 68084781 A C 27525107 0.0779 neutral AP5M1 14 57741429 T C 27525107 0.4782 deleterious FAM8A1 6 17605188 C G 27525107 0.5219 deleterious AUTS2 7 70255088 C T 27525107 IGSF9B 11 133805548 G A 27525107 0.7895 deleterious HIST1H4E 6 26204974 C T 27525107 FGD5 3 14862060 A G 27525107 CHD3 17 7803650 C G 27525107 0.8026 deleterious DYNC1H1 14 102460577 A G 27525107 KIAA0664 17 2595709 G A 27525107 PTGFRN 1 117491968 C T 27525107 KIRREL3 11 126343313 C T 27525107 0.8623 deleterious GRIN2C 17 72840498 C T 27525107 0.2541 neutral TRIP11 14 92470327 T - 27525107 TOPBP1 3 133372233 AT - 27525107 TCF12 15 57355957 A - 27525107 ADNP 20 49510213 TGAC - 27525107 SCN2A 2 166245191 C - 27525107 PER2 2 239171592 CT - 27525107 WDFY3 4 85605095 C - 27525107 RNF123 3 49737159 TCC - 27525107 DIP2C 10 412273 - CA 27525107 CELF2 10 11299713 - A 27525107 FAM200A 7 99145992 T - 27525107 IGSF9B 11 133790094 GGGGCT - 27525107 SCN2A 2 166170550 GCTGAACAGAAGGAAGCTGAATTTCAGCAGAT - 27525107 USP54 10 75294481 - C 27525107 ASB14 3 57321936 AA - 27525107 HEATR1 1 236759213 C - 27525107 SHANK3 22 51160793 - G 27525107 XRN1 3 142139978 - T 27525107 SYNGAP1 6 33406690 - A 27525107 SYNGAP1 6 33406694 CTGGT - 27525107 CD101 1 117554184 C - 27525107 ARHGAP32 11 128840352 CG C 27824329 CHD8 14 21862265 G GT 27824329 CHD8 14 21871185 AT A 27824329 CHD8 14 21878123 AT A 27824329 DSCAM 21 41719739 AG A 27824329 MED13L 12 116443746 CTG C 27824329 PHIP 6 79650574 TTC T 27824329 SCN2A 2 166152561 G GC 27824329 SCN2A 2 166179814 GAA G 27824329 SCN2A 2 166243497 ATT A 27824329 SCN2A 2 166246026 CAA C 27824329 STXBP1 9 130428475 ATC A 27824329 ZNF292 6 87965835 G GATCAC 27824329 WDFY3 4 85750232 C C/T 27824329 POGZ 1 151379747 C C/T 27824329 ASH1L 1 155348166 C C/T 27824329 ASH1L 1 155491090 G A/G 27824329 0.6564 deleterious TSC2 16 2124222 G A/G 27824329 0.9997 deleterious ITPR1 3 4752093 G A/G 27824329 0.2497 neutral CHD2 15 93563389 G A/G 27824329 0.8427 deleterious SCN2A 2 166229841 G C/G 27824329 0.9999 deleterious NCOR1 17 15983379 C C/G 27824329 SCN2A 2 166229733 A A/C 27824329 CUL3 2 225370672 C A/C 27824329 DOCK8 9 339101 T C/T 27824329 NCKAP1 2 183792844 C C/T 27824329 SHANK1 19 51190000 C C/T 27824329 ADNP 20 49510619 A A/T 27824329 CDKL5 X 18668586 C C/T 27824329 DSCAM 21 41446967 G G/A 27824329 DYRK1A 21 38853069 G G/T 27824329 GIGYF2 2 233655745 G G/T 27824329 GRIN2B 12 13768147 G A/G 27824329 MECP2 X 153296399 G A/G 27824329 MECP2 X 153296516 G A/G 27824329 MYT1L 2 1891360 G A/G 27824329 POGZ 1 151402109 G G/A 27824329 RIMS1 6 72975162 C A/C 27824329 SCN2A 2 166179813 C C/T 27824329 SCN2A 2 166201068 C C/T 27824329 SYNGAP1 6 33405522 C C/G 27824329 TRIP12 2 230724181 G A/G 27824329 WDFY3 4 85678225 G A/G 27824329 ADNP 20 49508151 C C/T 27824329 DYRK1A 21 38877659 G A/G 27824329 0.9644 deleterious DSCAM 21 41414453 G A/G 27824329 0.9125 deleterious WDFY3 4 85781627 G A/G 27824329 0.8595 deleterious ASH1L 1 155429689 C C/T 27824329 CHD8 14 21882530 T C/T 27824329 0.9737 deleterious GIGYF2 2 233675964 G A/G 27824329 0.8236 deleterious SCN2A 2 166167003 A A/G 27824329 SCN2A 2 166170189 C C/T 27824329 0.9873 deleterious SCN2A 2 166172026 G G/T 27824329 SCN2A 2 166245634 C C/T 27824329 HIVEP3 1 41976742 G A 28191889 POGZ 1 151380659 G 28191889 POGZ 1 151396736 G T 28191889 ASH1L 1 155307491 TTT 28191889 ASH1L 1 155448955 G 28191889 DHX9 1 182822497 C T 28191889 SCN2A 2 166164448 A 28191889 SCN2A 2 166229813 T 28191889 PARD3B 2 206057982 C 28191889 UNC80 2 210834493 C T 28191889 CUL3 2 225378301 CTTCG 28191889 TRIP12 2 230632431 A 28191889 SRGAP3 3 9106142 G A 28191889 0.9473 deleterious SETD5 3 9483895 A 28191889 SLC6A1 3 11067143 A 28191889 PLXNB1 3 48455336 A 28191889 PLXNB1 3 48459731 G A 28191889 0.9173 deleterious FOXP1 3 71019886 CTGTAAAGCTGCACTGTAAAGCTGCAT 28191889 TBL1XR1 3 176750796 T 28191889 ANK2 4 114302686 A 28191889 NAA15 4 140258086 T 28191889 NAA15 4 140264105 A 28191889 NAA15 4 140283033 T A 28191889 NAA15 4 140299939 A T 28191889 TRIO 5 14461227 A 28191889 UIMC1 5 176334157 A 28191889 PTK7 6 43106896 A 28191889 PHIP 6 79725374 T 28191889 ARID1B 6 157256598 G 28191889 ARID1B 6 157469898 T 28191889 ARID1B 6 157502271 C T 28191889 ARID1B 6 157527539 A 28191889 TRRAP 7 98550994 G A 28191889 0.6471 deleterious RELN 7 103155785 C T 28191889 0.8648 deleterious RELN 7 103163929 G A 28191889 RELN 7 103207069 G A 28191889 CSMD1 8 2954369 A G 28191889 WAC 10 28872407 AAA 28191889 SMC3 10 112359553 TTT 28191889 MKI67 10 129901679 TTG 28191889 CAPRIN1 11 34107924 C T 28191889 KMT5B 11 67926254 T 28191889 KMT5B 11 67939085 T 28191889 KMT5B 11 67939104 G 28191889 CHD4 12 6687244 A 28191889 GRIN2B 12 13720165 T 28191889 GRIN2B 12 13768467 C G 28191889 0.9369 deleterious GRIN2B 12 13768551 C T 28191889 0.9369 deleterious GRIN2B 12 14019043 GGGGGGGGC 28191889 MED13L 12 116434859 A 28191889 CHD8 14 21868156 A 28191889 CHD8 14 21871807 TTTTTTTC 28191889 CHD8 14 21897242 A 28191889 CHD2 15 93521585 A 28191889 CHD2 15 93552420 G A 28191889 0.8625 deleterious TSC2 16 2138510 T 28191889 SRCAP 16 30727385 G 28191889 DLG4 17 7121959 G 28191889 TANC2 17 61473156 G A 28191889 0.6173 deleterious DLGAP1 18 3879854 C T 28191889 0.9336 deleterious KATNAL2 18 44589434 A 28191889 KATNAL2 18 44595909 C 28191889 TCF4 18 52896077 A 28191889 TCF4 18 52896231 G A 28191889 TCF4 18 53017591 C 28191889 TCF4 18 53017621 CTTTG 28191889 ADNP 20 49508081 A T 28191889 ADNP 20 49508178 CTG 28191889 ADNP 20 49508751 TTTAA 28191889 ADNP 20 49508756 T 28191889 ADNP 20 49509038 G C 28191889 ADNP 20 49510578 G A 28191889 DYRK1A 21 38862503 C T 28191889 TNRC6B 22 40669452 GGGGGGGA 28191889 AIM1L 1 26656475 T C 23260136 HIVEP3 1 41976741 G A 23260136 FAM183A 1 43614555 C T 23260136 MPL 1 43817033 G C 23260136 C1orf177 1 55275779 C T 23260136 ROR1 1 64299853 C T 23260136 LEPR 1 66077433 G T 23260136 LOC100289211 1 146888184 A G 23260136 CASQ1 1 160164024 C T 23260136 MPZL1 1 167691899 G T 23260136 ESRRG 1 217030943 G C 23260136 TSNAX-DISC1 1 231774213 T C 23260136 KMO 1 241757651 T C 23260136 DIP2C 10 673309 C T 23260136 LOC100132159 10 5564238 T C 23260136 PLXDC2 10 20508633 A T 23260136 PRKG1 10 53628989 T C 23260136 CTNNA3 10 68702199 G C 23260136 C10orf11 10 77830945 C T 23260136 LIPK 10 90492540 G A 23260136 LOC728558 10 97622262 T C 23260136 C10orf76 10 103608372 C T 23260136 WDR11 10 122636301 A G 23260136 STK32C 10 134025920 A T 23260136 APBB1 11 6422668 G A 23260136 GALNTL4 11 11509603 T C 23260136 TEAD1 11 12819714 T G 23260136 MS4A5 11 60213221 G C 23260136 CYBASC3 11 61120862 C T 23260136 ENDOD1 11 94843165 C T 23260136 POU2F3 11 120148899 C T 23260136 POU2F3 11 120150577 A G 23260136 FEZ1 11 125353018 A G 23260136 KIRREL3 11 126293121 A G 23260136 SNX19 11 130753886 G A 23260136 NTM 11 132158232 A C 23260136 OPCML 11 133255038 C T 23260136 GUCY2C 12 14811276 A G 23260136 PIK3C2G 12 18510220 C T 23260136 PDE3A 12 20809161 C A 23260136 SOX5 12 24573279 G A 23260136 ADCY6 12 49173602 C T 23260136 LRRIQ1 12 85605029 T C 23260136 LOC643339 12 93657211 A C 23260136 TMPO 12 98935928 A T 23260136 TMEM132C 12 128807885 C T 23260136 TMEM132D 12 129581773 C T 23260136 TMEM132D 12 129763345 C T 23260136 PAN3 13 28816615 A G 23260136 TNFSF11 13 43174596 A T 23260136 SIAH3 13 46387344 G A 23260136 RCBTB2 13 49093193 A G 23260136 DLEU2 13 50585011 C G 23260136 DIS3 13 73344237 G A 23260136 PIBF1 13 73429507 G C 23260136 FAM155A 13 108303699 C T 23260136 NPAS3 14 33486057 C A 23260136 NPAS3 14 34079788 A T 23260136 RAD51B 14 68661216 C T 23260136 DPF3 14 73307938 G C 23260136 AK055876 14 73930294 G A 23260136 LOC100628307 14 80914911 C T 23260136 FOXN3 14 89853769 A C 23260136 PSMC1 14 90733677 T A 23260136 TECPR2 14 102913783 C G 23260136 GABRG3 15 27388483 C T 23260136 CHP 15 41535518 C G 23260136 SLC12A1 15 48560743 G A 23260136 ADAM10 15 58903342 A G 23260136 SNX1 15 64435633 C G 23260136 MEF2A 15 100197931 A T 23260136 FAHD1 16 1883253 C A 23260136 FAHD1 16 1883254 C A 23260136 ZC3H7A 16 11845394 A G 23260136 SHISA9 16 13219054 A C 23260136 CNEP1R1 16 50068228 C A 23260136 PKD1L3 16 71965113 G A 23260136 WWOX 16 79149664 A C 23260136 DNAH2 17 7627294 A G 23260136 ARHGAP44 17 12852467 A T 23260136 ASIC2 17 32292577 A G 23260136 ACACA 17 35457118 C T 23260136 FBXL20 17 37460701 G A 23260136 MSI2 17 55428700 G A 23260136 HSF5 17 56513306 T G 23260136 ARSG 17 66303921 C T 23260136 RBFOX3 17 77385959 C A 23260136 TWSG1 18 9340985 G A 23260136 RAB31 18 9795026 G A 23260136 RAB31 18 9822605 C T 23260136 SPIRE1 18 12540399 G A 23260136 ANKRD20A5P 18 14216251 A T 23260136 ROCK1 18 18566956 T C 23260136 TTC39C 18 21635210 G A 23260136 NOL4 18 31567743 A G 23260136 NOL4 18 31791701 A G 23260136 CELF4 18 35094643 G A 23260136 LOC647946 18 36897149 A T 23260136 TCF4 18 52889987 C T 23260136 ZNF532 18 56585010 C A 23260136 CCDC102B 18 66635186 C G 23260136 ZNF516 18 74197921 G C 23260136 ATP9B 18 76882805 A G 23260136 NFATC1 18 77191333 G A 23260136 MUM1 19 1359502 T C 23260136 SAE1 19 47709838 G A 23260136 ZNF541 19 48059056 A G 23260136 0.1025 neutral U2AF2 19 56178953 C G 23260136 VRK2 2 58288501 T A 23260136 FLJ30838 2 58923308 T C 23260136 FLJ30838 2 59145178 A G 23260136 USP34 2 61451537 T G 23260136 LOC339807 2 64844094 G A 23260136 FAM176A 2 75732065 G A 23260136 LRRTM4 2 77624540 T G 23260136 CTNNA2 2 80847447 C T 23260136 AFF3 2 100265100 A G 23260136 CNTNAP5 2 125647237 T C 23260136 NCKAP5 2 133976129 A C 23260136 CCDC141 2 179833587 A G 23260136 PLCL1 2 198733032 T C 23260136 PLCL1 2 198953607 A G 23260136 LOC100130451 2 214140664 G A 23260136 LOC646324 2 216555189 T C 23260136 PID1 2 230134173 A G 23260136 DNER 2 230425406 T C 23260136 DNER 2 230528243 T G 23260136 AGAP1 2 236984962 G A 23260136 PLCB1 20 8337232 C T 23260136 MACROD2 20 15567973 C T 23260136 CDH22 20 44880608 C A 23260136 KCNB1 20 48084666 A G 23260136 DNAJC5 20 62561664 G T 23260136 APP 21 27457755 A T 23260136 PDE9A 21 44144183 G T 23260136 BID 22 18241016 C T 23260136 PDXP 22 38060759 G A 23260136 NPTXR 22 39216799 T C 23260136 RAD18 3 8983216 G C 23260136 0.0141 neutral TAMM41 3 11865102 A G 23260136 CCDC13 3 42781953 T C 23260136 IL17RD 3 57133512 A G 23260136 FOXP1 3 71344697 C T 23260136 LOC440970 3 84716768 T C 23260136 EPHA6 3 96635896 G A 23260136 EPHA6 3 96934280 G T 23260136 C3orf26 3 99802819 T C 23260136 LOC100302640 3 106937261 G A 23260136 CPNE4 3 131574033 G T 23260136 TMEM108 3 132910706 G A 23260136 RAB6B 3 133549522 G C 23260136 KCNAB1 3 156069040 G C 23260136 FNDC3B 3 172085628 C G 23260136 NLGN1 3 173240607 G A 23260136 NLGN1 3 173587491 G A 23260136 NLGN1 3 173687596 C T 23260136 NAALADL2 3 174935512 G A 23260136 NAALADL2 3 174955785 A G 23260136 ZNF721 4 476741 C A 23260136 ZFYVE28 4 2296449 C T 23260136 TBC1D1 4 37901375 A G 23260136 DCUN1D4 4 52742146 A T 23260136 PRKG2 4 82074713 G A 23260136 ARHGAP24 4 86588900 A G 23260136 GRID2 4 93564738 C T 23260136 UNC5C 4 96248588 C A 23260136 CISD2 4 103796600 G C 23260136 SLC9B2 4 103991061 G A 23260136 TBCK 4 107080897 G A 23260136 BBS7 4 122768248 T C 23260136 SLC7A11 4 139160971 C T 23260136 MMAA 4 146578882 G A 23260136 PALLD 4 169454585 T C 23260136 GLRA3 4 175749919 A G 23260136 LOC285441 4 187214768 G A 23260136 CTNND2 5 11405108 G A 23260136 WDR70 5 37744844 T C 23260136 EGFLAM 5 38453768 A G 23260136 COL4A3BP 5 74793289 T C 23260136 GPR98 5 90449166 G A 23260136 GPR98 5 90449224 A T 23260136 KIAA0825 5 93542940 T G 23260136 MCTP1 5 94296553 G A 23260136 FER 5 108251978 T C 23260136 APC 5 112120370 G A 23260136 MCC 5 112605198 T G 23260136 CTNNA1 5 138180194 C A 23260136 PPP2R2B 5 146168472 A G 23260136 TTC1 5 159489277 G A 23260136 ODZ2 5 167400871 A G 23260136 WWC1 5 167797801 C T 23260136 PXDC1 6 3726809 A T 23260136 FAM8A1 6 17610527 A C 23260136 LRRC16A 6 25479874 A G 23260136 ZSCAN12 6 28347331 G A 23260136 GRM4 6 34043638 G A 23260136 STK38 6 36512111 C A 23260136 SUPT3H 6 45207626 C T 23260136 MLIP 6 54126419 T C 23260136 LOC728012 6 100476441 G A 23260136 PTPRK 6 128296458 G A 23260136 AHI1 6 135640595 G C 23260136 SYNE1 6 152670734 G A 23260136 PARK2 6 162117122 C T 23260136 RNF216 7 5740026 G A 23260136 NXPH1 7 8739033 A G 23260136 HDAC9 7 18212148 C T 23260136 PPP1R17 7 31726770 C G 23260136 AAA1 7 34624235 T C 23260136 URGCP 7 43937886 G A 23260136 CCDC132 7 92884392 A G 23260136 LHFPL3 7 104417325 C T 23260136 ST7 7 116856573 G A 23260136 ZNF800 7 127014927 A G 23260136 FLJ43663 7 130784694 A G 23260136 TMEM139 7 142983945 C T 23260136 ZNF398 7 148878885 C T 23260136 CSMD1 8 3282096 A G 23260136 CSMD1 8 3885234 G T 23260136 CSMD1 8 3905289 G C 23260136 CSMD1 8 4128797 G T 23260136 SGCZ 8 13983619 A T 23260136 TUSC3 8 15616831 G C 23260136 MTUS1 8 17565338 A C 23260136 SH2D4A 8 19184456 G A 23260136 PLEKHA2 8 38829626 A C 23260136 STAU2 8 74592985 A G 23260136 LRRCC1 8 86048097 C T 23260136 CNBD1 8 88205377 G A 23260136 LOC100616530 8 96703669 C A 23260136 LOC100616530 8 96704612 C G 23260136 LOC100616530 8 96705905 G A 23260136 VPS13B 8 100029718 T G 23260136 VPS13B 8 100264851 G T 23260136 CSMD3 8 113447648 T C 23260136 EXT1 8 118938367 T C 23260136 NOV 8 120427655 C G 23260136 FAM135B 8 139301204 T C 23260136 EEF1D 8 144662544 C T 23260136 PTPRD 9 9605253 A G 23260136 PTPRD 9 9674564 C T 23260136 C9orf93 9 15930797 A G 23260136 FLJ35282 9 22768115 T G 23260136 LINGO2 9 28359590 A T 23260136 LOC340515 9 93227470 A G 23260136 ANKS6 9 101556844 G A 23260136 ZNF462 9 109726327 C T 23260136 NEK6 9 127034503 C A 23260136 NR6A1 9 127402131 G A 23260136 CERCAM 9 131193745 C T 23260136 CNKSR2 X 21551139 T C 23260136 DDX53 X 23017563 T A 23260136 SHROOM4 X 50348560 C T 23260136 CHM X 85247867 G A 23260136 NLGN4Y Y 16639135 C T 23260136 TMEM131 2 98429018 C T 28263302 WAC 10 28903528 TCACA TCA 28263302 KLHL7 7 23191720 C T 28263302 SYT7 11 61314661 G A 28263302 SMARCC2 12 56567574 G A 28263302 EFR3B 2 25360307 CAGCATCGAGC CAGC 28263302 PEG10 7 94294003 TC TCC 28263302 PPP1R7 2 242098627 ACT A 28263302 STKLD1 9 136245993 G A 28263302 NSD1 5 176636717 C T 28263302 FGD4 12 32786564 AT A 28263302 CALU 7 128379486 G T 28263302 GRIK1 21 30961290 G T 28263302 0.0025 neutral CHD7 8 61769254 ACCAGTGTCTG A 28263302 TWF2 3 52263209 ATC A 28263302 TMEM45A 3 100295832 C T 28263302 TNC 9 117808799 C CG 28263302 SRCAP 16 30740737 ATGCC A 28263302 AFAP1L1 5 148681996 C CA 28263302 TRIP11 14 92470325 CT C 28263302 ADNP 20 49508080 A T 28263302 MECP2 X 153296591 C CG 28263302 CHM X 85233895 C T 28263302 0.6339 deleterious NME8 7 37889877 A AAAAAACG 28263302 CNOT3 19 54653359 CAG C 28263302 SHANK2 11 70336410 G A 28263302 KATNAL1 13 30815116 GATA GA 28263302 NFE2L3 7 26224263 CAT CATAT 28263302 KREMEN1 22 29490351 C A 28263302 SET 9 131446286 G C 28263302 0.3018 neutral SET 9 131446286 G C 28263302 0.3018 neutral SLC35G1 10 95660507 G C 28263302 ZNF790 19 37310284 G A 28263302 TCF24 8 67860293 G A 28263302 DDX3X X 41202564 AT A 28263302 CHD8 14 21861804 G GT 28263302 TAOK2 16 30002794 TGGGCCCCCCTGCTGCCGCGGTGCCC T 28263302 SLC25A30 13 45980041 G A 28263302 POLR3A 10 79743676 C T 28263302 KDM6A X 44938511 CT CTT 28263302 LMTK3 19 49002674 GC G 28263302 PITPNA 17 1437418 C A 28263302 OXR1 8 107752663 C T 28263302 SDR42E1 16 82033419 C A 28263302 IPPK 9 95432255 CTT CTTT 28263302 CCM2L 20 30602724 C T 28263302 DMWD 19 46289385 CA C 28263302 DHX57 2 39090539 G A 28263302 CRIM1 2 36668494 TGGGG TGGG 28263302 KYNU 2 143798227 G T 28263302 TCF20 22 42610275 G A 28263302 STXBP1 9 130444715 GC G 28263302 NPAT 11 108044473 G A 28263302 ADNP 20 49510211 TTGACTGAC TTGAC 28263302 SCN2A 2 166245189 TCC TC 28263302 UBN2 7 138958061 C T 28263302 ARID1B 6 157150546 C T 28263302 KIF11 10 94373232 AG A 28263302 NHLRC2 10 115636458 CGTGGAAACATGTTGTTT C 28263302 KCNQ2 20 62038127 C CT 28263302 UBAP2 9 33989058 CTCTTT CT 28263302 APOA1BP 1 156562184 G GC 28263302 KMT2A 11 118374300 CTG C 28263302 HYKK 15 78805672 GA G 28263302 RBM19 12 114362500 C T 28263302 NUDT17 1 145589056 T A 28263302 TRPM6 9 77353333 A T 28263302 PER2 2 239171590 ACTCT ACT 28263302 WDFY3 4 85605093 ACCC ACC 28263302 SPEN 1 16258126 C T 28263302 AP1G2 14 24034326 C T 28263302 AZGP1 7 99573612 GA G 28263302 CHD8 14 21865979 A T 28263302 CELF2 10 11299712 GAAAA GAAAAA 28263302 FAM200A 7 99145990 CT C 28263302 KNDC1 10 135027506 ACC AC 28263302 MIPEP 13 24436437 TA TAA 28263302 STXBP5L 3 120673792 CG C 28263302 G3BP2 4 76582915 T C 28263302 RESP18 2 220193654 TATAG T 28263302 HECTD4 12 112669402 T TG 28263302 ERF 19 42753716 G A 28263302 SCN1A 2 166848294 CTG C 28263302 ANOS1 X 8522079 G A 28263302 CAPRIN1 11 34107923 C T 28263302 BSDC1 1 32852480 CCA C 28263302 ATRN 20 3452126 GT GTT 28263302 HIBADH 7 27669027 TTCTC T 28263302 KDM5B 1 202727532 TG TGG 28263302 USP54 10 75294479 TCC TCCC 28263302 CIC 19 42777516 C T 28263302 ASB14 3 57321934 GAA G 28263302 HEATR1 1 236759211 TC T 28263302 PRR14L 22 32108904 A T 28263302 0.5334 deleterious SHANK3 22 51160792 TGGGGG TGGGGGG 28263302 XRN1 3 142139977 G GT 28263302 CYP17A1 10 104596940 AT A 28263302 C9orf3 9 97718193 ACTTCCTTC ACTTC 28263302 STAU1 20 47739663 G A 28263302 NLRP12 19 54308705 T G 28263302 LSM3 3 14223146 C T 28263302 ASXL3 18 31324717 C T 28263302 ITSN1 21 35190683 CAT C 28263302 RB1CC1 8 53537291 GT GTT 28263302 G3BP1 5 151166276 G A 28263302 0.0793 neutral ASH1L 1 155324287 G A 28263302 CD101 1 117554182 ACCC ACC 28263302 SPRY2 13 80911548 G A 28263302 CSMD3 8 114388958 ATATCTA ATATCTATCTA 28263302 FXYD5 19 35648394 C T 28263302 CPSF7 11 61183967 G A 28263302 TRRAP 7 98574116 TGAGATAAG TGAGATAAGAGATAAG 28263302 BRF1 14 105695155 C A 28263302 PIP4K2B 17 36927265 CTTTCATGGCTTTTCATGGC CTTTCATGGC 28263302 SMCR8 17 18221161 GACA GACACA 28263302 DNM1L 12 32861132 CAGA CA 28263302 ZNF687 1 151260449 CACCTGCA C 28263302 HELZ2 20 62194948 GCCC GCC 28263302 SHANK3 22 51153475 G A 28263302 SOX5 12 23999045 G A 28263302 C18orf54 18 51889162 CTT CTTT 28263302 PHF23 17 7140735 CCAAAACAAAAC CCAAAAC 28263302 PSMA3 14 58737715 GGT G 28263302 CROT 7 86988627 A AG 28263302 SHANK3 22 51159130 AG A 28263302 DGCR8 22 20074157 CG C 28263302 ABHD12B 14 51355598 GTATCAATTATC GTATC 28263302 SLC22A7 6 43269430 G T 28263302 0.9841 deleterious C9orf106 9 132084673 CA C 28263302 NAA15 4 140264104 AACACA AACA 28263302 SLC6A1 3 11067142 C A 28263302 SLC6A1 3 11067142 C A 28263302 ADTRP 6 11723582 C T 28263302 0.3085 neutral CCDC125 5 68578753 ATTTTTTT ATTTTTT 28263302 DCP1A 3 53321635 G A 28263302 GPR171 3 150916906 TA TAA 28263302 MSH2 2 47643525 G A 28263302 EBF1 5 158140033 G T 28263302 RPH3A 12 113314541 C T 28263302 CTBP2 10 126681769 C T 28263302 CDC42BPB 14 103442067 ATTTCTTT ATTT 28263302 MAPK9 5 179675991 ACCC ACC 28263302 FOXO6 1 41847733 GCC GC 28263302 CRTC2 1 153923769 G GT 28263302 AVPR1A 12 63543651 C T 28263302 SLC35A3 1 100480976 G A 28263302 TSHZ1 18 72997768 TAAA TAA 28263302 FKBP15 9 115938947 G A 28263302 CASZ1 1 10699874 GAA GAAA 28263302 CASZ1 1 10699874 GAA GAAA 28263302 UNC5B 10 73046443 A T 28263302 UNC5B 10 73046443 A T 28263302 TRIM66 11 8673345 C T 28263302 PRPF8 17 1580857 C G 28263302 NID2 14 52472448 TTTTA TTTTATTTA 28263302 FANCE 6 35423695 C T 28263302 PHF3 6 64413518 CACAGACAG CACAG 28263302 INADL 1 62579916 C T 28263302 ROCK1 18 18562716 CACTTAC CAC 28263302 ITPRIPL1 2 96992507 C T 28263302 C5 9 123753483 TCC TC 28263302 TLR3 4 186997803 TGGGGGGG TGGGGGG 28263302 SLC4A5 2 74460634 C T 28263302 COL9A2 1 40767005 G A 28263302 MED13 17 60088343 G A 28263302 MICU2 13 22096779 GAAA GAA 28263302 ENTPD6 20 25194012 G T 28263302 CMYA5 5 79025667 ACAGTCAGT ACAGT 28263302 SLC12A6 15 34536214 G A 28263302 PRMT2 21 48068399 CCAC CCACAC 28263302 DUS1L 17 80019814 CAG C 28263302 CEP120 5 122718490 G T 28263302 HCRTR1 1 32090596 G C 28263302 COG5 7 106851655 TGG TG 28263302 FBXW5 9 139836000 G T 28263302 ICE1 5 5447859 GAAAAA GAAAAAA 28263302 CCNT2 2 135710843 A AAT 28263302 BCLAF1 6 136582483 G C 28263302 0.9332 deleterious ANKMY1 2 241492374 G A 28263302 CFAP43 10 105920793 C T 28263302 PMM2 16 8906896 C A 28263302 OVCA2 17 1945489 ACCCCCC ACCCCC 28263302 EZR 6 159240347 C T 28263302 PTEN 10 89692960 C T 28263302 HHAT 1 210522328 C T 28263302 DUOX1 15 45436232 G C 28263302 ATP13A3 3 194146080 G T 28263302 DNAJC10 2 183583006 AT A 28263302 HMGN2 1 26800626 G T 28263302 0.3527 neutral ITGB5 3 124560282 G A 28263302 ABCB6 2 220075779 AGTGT AGT 28263302 SLC47A2 17 19583282 T A 28263302 0.0116 neutral TTC37 5 94830465 A T 28263302 AP4E1 15 51294757 C T 28263302 CKAP5 11 46811684 G A 28263302 ARNTL 11 13399901 ACCCC ACCCCC 28263302 NOXO1 16 2031167 G A 28263302 MRE11A 11 94192626 G A 28263302 POLI 18 51795940 G T 28263302 LRP4 11 46897495 C T 28263302 0.4888 neutral PHF12 17 27244344 AGGGGGG AGGGGGGG 28263302 PPP2R5D 6 42978705 AAGAG AAG 28263302 SRSF11 1 70697982 CTG C 28263302 MYT1L 2 1926775 ACTGT A 28263302 SCN2A 2 166170548 GGCTGAACAGAAGGAAGCTGAATTTCAGCAGAT G 28263302 SCN2A 2 166245189 TC T 28263302 NAA15 4 140264104 AAC A 28263302 PHF3 6 64413518 CACAG C 28263302 KMT2C 7 151949720 TA T 28263302 WAC 10 28903528 TCA T 28263302 SUV420H1 11 67926063 AGGAGCTGGCTGCAGCTGTTCACCACTGTCGGGGCAAGGTTCCGTCACACTGCTTTTATAGCCATTCAACGTATTTG A 28263302 KMT2A 11 118371708 AG A 28263302 KMT2A 11 118374300 CTG C 28263302 CNOT3 19 54653359 CAG C 28263302 ADNP 20 49510211 TTGAC T 28263302 DDX3X X 41202564 AT A 28263302 UPF3B X 118971853 CTTTT C 28263302 MECP2 X 153296070 GGGGGGCTGGTGGGGTCCTCGGAGCTCTCGGGCTCAGGTGGAGGT G 28263302 PAX5 9 37020767 A AC 28263302 DIP2C 10 412272 G GCA 28263302 CHD8 14 21861804 G GT 28263302 SHANK3 22 51160792 T TG 28263302 KDM6A X 44938511 C CT 28263302 MECP2 X 153296591 C CG 28263302 ASH1L 1 155324287 G A 28263302 ARID1B 6 157150546 C T 28263302 UBN2 7 138958061 C T 28263302 PTEN 10 89692960 C T 28263302 SHANK2 11 70336410 G A 28263302 SMARCC2 12 56567574 G A 28263302 MED13 17 60088343 G A 28263302 ASXL3 18 31324717 C T 28263302 CIC 19 42777516 C T 28263302 WDFY3 4 85605093 AC A 28263302 CHD8 14 21865979 A T 28263302 SHANK3 22 51153475 G A 28263302 KDM6A X 44896898 G A 28263302 CHD8 14 21862265 C T 28831199 DYRK1A 21 38853069 G T 28831199 MECP2 X 153296471 G A 28831199 NRXN2 11 64457918 C G 28831199 POGZ 1 151402109 G A 28831199 SCN2A 2 166179813 C T 28831199 RFX3 9 3248164 TA C 28831199 ANK2 4 114275103 G C 28831199 0.8702 deleterious ARHGEF10 8 1877564 G A 28831199 0.8669 deleterious BRD3 9 136913560 C T 28831199 0.9832 deleterious CEP152 15 49048380 T C 28831199 0.6365 deleterious CHRM3 1 240072174 A T 28831199 0.9843 deleterious CPT2 1 53676893 T C 28831199 0.9995 deleterious FBN2 5 127702120 T G 28831199 0.7642 deleterious KRT7 12 52635307 A G 28831199 0.9735 deleterious MAPK4 18 48241495 G A 28831199 0.9523 deleterious MKL2 16 14340619 C T 28831199 0.2358 neutral MYH9 22 36697021 C T 28831199 0.9657 deleterious POMT1 9 134396829 C T 28831199 0.5125 deleterious TJP2 9 71849443 T C 28831199 0.4182 neutral SHANK3 22 51159158 29423971 SHANK3 22 51159534 C T 29423971 SYNGAP1 6 33408570 C T 29381230 0.7943 deleterious PLEKHN1 1 905674 G A 29346770 AGRN 1 955717 C T 29346770 AGRN 1 980641 CCTGGCTGG C 29346770 ATAD3B 1 1425957 C T 29346770 0.0078 neutral NPHP4 1 5935138 T C 29346770 0.4932 neutral CHD5 1 6202253 G T 29346770 ENO1 1 8931983 G A 29346770 0.9988 deleterious MTOR 1 11316137 C T 29346770 0.9882 deleterious SPEN 1 16262656 G C 29346770 CLCNKA 1 16352629 A G 29346770 0.2619 neutral CROCC 1 17272061 T C 29346770 0.9229 deleterious AGO4 1 36307019 C T 29346770 0.9944 deleterious AGO1 1 36359358 G T 29346770 0.987 deleterious MACF1 1 39917969 GT G 29346770 CPT2 1 53676213 A G 29346770 GLIS1 1 53974866 G A 29346770 DEPDC1 1 68949730 A G 29346770 LHX8 1 75602329 C T 29346770 PRPF38B 1 109242140 AAGAG A 29346770 POGZ 1 151378393 C T 29346770 0.8927 deleterious SPRR2A 1 153029019 A G 29346770 0.0001 neutral PBX1 1 164769051 G C 29346770 0.9404 deleterious RCSD1 1 167654679 C A 29346770 SELP 1 169576253 C G 29346770 0.2831 neutral TRMT1L 1 185109103 AC A 29346770 RAB3GAP2 1 220363844 A C 29346770 WDR26 1 224599157 G C 29346770 0.3756 neutral AHCTF1 1 247014152 T C 29346770 0.0326 neutral C2orf48 2 10350638 A C 29346770 0.0168 neutral NRXN1 2 51255348 C G 29346770 0.5385 deleterious USP34 2 61415298 A G 29346770 0.7163 deleterious SNRNP200 2 96944354 C T 29346770 0.9195 deleterious MCM6 2 136626351 G A 29346770 0.9985 deleterious THSD7B 2 138375981 G A 29346770 KCNH7 2 163241305 A C 29346770 0.1627 neutral PLEKHA3 2 179358628 G A 29346770 0.9107 deleterious TTN 2 179428473 C T 29346770 WDR75 2 190313139 G A 29346770 0.2043 neutral DNAH7 2 196891487 T C 29346770 0.0419 neutral NBEAL1 2 203949293 G T 29346770 FN1 2 216239958 C T 29346770 0.4875 neutral TRIP12 2 230663998 C G 29346770 TRIP12 2 230667043 G A 29346770 0.0748 neutral TRIP12 2 230668934 GA G 29346770 SH3BP4 2 235951884 T TTG 29346770 GPR35 2 241569791 G T 29346770 0.9323 deleterious GAL3ST2 2 242743557 G A 29346770 ARPC4-TTLL3 3 9870992 C T 29346770 ATP2B2 3 10381972 C T 29346770 ATP2B2 3 10392130 G T 29346770 DCLK3 3 36759633 C T 29346770 0.9181 deleterious XIRP1 3 39226658 T TG 29346770 COL7A1 3 48611123 C T 29346770 TMEM115 3 50396002 G C 29346770 0.9763 deleterious CHDH 3 53857760 C T 29346770 EPHA3 3 89480428 C A 29346770 0.0609 neutral OR5H2 3 98002470 G A 29346770 0.0861 neutral NFKBIZ 3 101574022 T G 29346770 0.0032 neutral SEMA5B 3 122646805 G A 29346770 0.8801 deleterious KBTBD12 3 127703015 A G 29346770 0.2359 neutral IFT122 3 129185800 A G 29346770 0.0052 neutral PLXND1 3 129289671 G A 29346770 STAG1 3 136139953 C A 29346770 0.2555 neutral MME 3 154834771 T C 29346770 0.9997 deleterious PIK3CA 3 178947865 G A 29346770 0.9073 deleterious PIK3CA 3 178952088 A G 29346770 0.9073 deleterious MAGEF1 3 184429025 C A 29346770 MFSD7 4 675887 C G 29346770 0.005 neutral CCDC149 4 24810027 C T 29346770 0.0102 neutral UCHL1 4 41259002 C G 29346770 GABRA2 4 46307662 G A 29346770 0.8666 deleterious GABRB1 4 47405626 T C 29346770 0.8666 deleterious SRP72 4 57337973 G A 29346770 HPGDS 4 95220705 T A 29346770 0.0369 neutral GSTCD 4 106640339 T C 29346770 ELOVL6 4 110980766 G A 29346770 PDE5A 4 120428769 G A 29346770 PCDH10 4 134073761 G C 29346770 0.828 deleterious NAA15 4 140262083 CT C 29346770 ARFIP1 4 153750873 AAT A 29346770 WWC2 4 184182236 ACTTC A 29346770 PRIMPOL 4 185587102 G A 29346770 0.0377 neutral C5orf55 5 442755 G T 29346770 TRIO 5 14143965 C T 29346770 0.1329 neutral C5orf42 5 37169237 C CT 29346770 MROH2B 5 41064614 C T 29346770 SKIV2L2 5 54649092 C T 29346770 COL4A3BP 5 74801861 A C 29346770 0.0206 neutral LHFPL2 5 77805897 G C 29346770 0.0104 neutral YTHDC2 5 112878139 A G 29346770 TMED7-TICAM2 5 114916409 C T 29346770 0.0637 neutral PCDHGB7 5 140799782 A C 29346770 0.0156 neutral GM2A 5 150646399 G A 29346770 0.0687 neutral G3BP1 5 151180332 G A 29346770 0.0742 neutral SLU7 5 159831501 T C 29346770 GABRG2 5 161522557 G A 29346770 0.7671 deleterious ZNF354B 5 178310216 T C 29346770 0.1524 neutral GMDS 6 1961168 G A 29346770 RANBP9 6 13625977 G A 29346770 0.9959 deleterious SYNGAP1 6 33409439 C T 29346770 UHRF1BP1 6 34826068 T C 29346770 MOCS1 6 39902097 G C 29346770 0.4875 neutral C6orf132 6 42072671 G T 29346770 0.7684 deleterious C6orf132 6 42072672 C T 29346770 0.3952 neutral PPP2R5D 6 42975003 G A 29346770 0.4696 neutral RUNX2 6 45459840 G A 29346770 0.0865 neutral KLHL31 6 53519591 A G 29346770 SNX14 6 86303351 G C 29346770 0.5207 deleterious SLC35A1 6 88210320 G T 29346770 0.992 deleterious BEND3 6 107419781 C T 29346770 0.8119 deleterious ARHGAP18 6 129963090 G A 29346770 CNKSR3 6 154727786 CCT C 29346770 MLLT4 6 168298969 G A 29346770 0.8756 deleterious HEATR2 7 801482 C T 29346770 TNRC18 7 5348876 T C 29346770 0.4172 neutral GRID2IP 7 6550619 T TG 29346770 NXPH1 7 8790890 A G 29346770 0.9909 deleterious RALA 7 39726339 G A 29346770 0.9998 deleterious CAMK2B 7 44259671 G A 29346770 0.289 neutral PCLO 7 82544191 T C 29346770 0.6522 deleterious COL1A2 7 94039077 C T 29346770 0.9375 deleterious LAMB1 7 107569954 G A 29346770 MET 7 116398602 G A 29346770 0.5103 deleterious FLNC 7 128478444 G T 29346770 0.7819 deleterious KLHDC10 7 129736794 G A 29346770 0.7239 deleterious ERI1 8 8873831 G A 29346770 CHD7 8 61774804 G A 29346770 0.9801 deleterious LRRCC1 8 86048065 G A 29346770 RBM12B 8 94746964 G A 29346770 MATN2 8 98991194 C T 29346770 0.1068 neutral CSMD3 8 113649210 T A 29346770 0.9865 deleterious EIF3H 8 117669454 G A 29346770 0.785 deleterious COL14A1 8 121211702 A C 29346770 DENND3 8 142170768 G A 29346770 0.018 neutral BAI1 8 143592361 A G 29346770 PLEC 8 144995036 C G 29346770 0.0855 neutral KIFC2 8 145693250 G A 29346770 SLC24A2 9 19619608 A T 29346770 0.9997 deleterious FAM219A 9 34401083 T A 29346770 0.9849 deleterious DCAF10 9 37860178 T G 29346770 0.0017 neutral PTCH1 9 98239927 C T 29346770 0.4747 deleterious GABBR2 9 101133817 C T 29346770 0.8621 deleterious IKBKAP 9 111681091 T C 29346770 0.3369 neutral DAB2IP 9 124530734 T C 29346770 0.723 deleterious PTGS1 9 125154742 C A 29346770 PBX3 9 128509871 G A 29346770 0.4332 neutral MVB12B 9 129184210 A T 29346770 0.9405 deleterious TTC16 9 130487112 G A 29346770 0.0204 neutral CDK9 9 130549061 G C 29346770 ENG 9 130578257 A G 29346770 0.9386 deleterious GOLGA2 9 131020733 C T 29346770 ZER1 9 131503896 C T 29346770 ENDOG 9 131584651 G A 29346770 0.9451 deleterious NTNG2 9 135073659 G T 29346770 0.9502 deleterious SURF6 9 136201373 CTT C 29346770 QSOX2 9 139108459 T C 29346770 0.685 deleterious PMPCA 9 139313507 G C 29346770 0.6124 deleterious FBXW5 9 139836869 TG T 29346770 MKX 10 28030357 G A 29346770 0.8964 deleterious WDFY4 10 50155005 C T 29346770 COL13A1 10 71648062 TC T 29346770 RPS24 10 79814442 T A 29346770 0.0052 neutral STAMBPL1 10 90668462 A T 29346770 0.3455 neutral SLC16A12 10 91198564 G A 29346770 TRIM8 10 104416554 T TG 29346770 GPAM 10 113941493 G A 29346770 0.3733 neutral FAM160B1 10 116620601 G A 29346770 0.0709 neutral CPXM2 10 125521594 G A 29346770 0.0953 neutral TCERG1L 10 133109867 C T 29346770 0.0236 neutral HBG1 11 5269621 C T 29346770 0.0178 neutral OR52N5 11 5799207 T C 29346770 0.0057 neutral CCKBR 11 6281224 C T 29346770 ABCC8 11 17436882 C CT 29346770 SLC5A12 11 26732893 C T 29346770 0.9995 deleterious WT1 11 32410678 C G 29346770 0.9963 deleterious LMO2 11 33890952 C T 29346770 0.4973 deleterious OR4C46 11 51515545 G C 29346770 0.01 neutral EHD1 11 64622239 C T 29346770 0.8576 deleterious DPF2 11 65111483 C T 29346770 0.6562 deleterious SF3B2 11 65826778 A G 29346770 0.5989 deleterious ADRBK1 11 67051346 C T 29346770 0.7064 deleterious ANKRD13D 11 67056954 T C 29346770 0.0351 neutral RPS6KB2 11 67198951 G A 29346770 0.4501 neutral ARRB1 11 74994486 C A 29346770 0.9898 deleterious VWF 12 6121251 A G 29346770 TPI1 12 6976676 G A 29346770 A2M 12 9230450 G A 29346770 SSPN 12 26377307 A G 29346770 0.6884 deleterious ERGIC2 12 29496095 C CA 29346770 ANP32D 12 48866524 ACAGT A 29346770 SMARCD1 12 50480605 C T 29346770 KRT85 12 52754716 G A 29346770 0.0687 neutral KRT18 12 53343125 C T 29346770 AVPR1A 12 63544381 G A 29346770 0.3727 neutral PTPN11 12 112926270 C T 29346770 0.9864 deleterious MED13L 12 116403994 G A 29346770 0.9469 deleterious SPPL3 12 121206844 C CAGAG 29346770 ZNF268 12 133779856 T G 29346770 0.0155 neutral SACS 13 23905698 A G 29346770 0.8908 deleterious SPG20 13 36909888 A G 29346770 0.7416 deleterious KIAA0226L 13 46933633 T G 29346770 0.8344 deleterious ZIC5 13 100623117 G T 29346770 NALCN 13 101795438 T G 29346770 0.5666 deleterious NALCN 13 101944423 A G 29346770 0.7969 deleterious ARHGEF7 13 111927885 T C 29346770 0.8751 deleterious LRP10 14 23346233 C T 29346770 0.7903 deleterious REM2 14 23355292 C T 29346770 IL25 14 23845075 C T 29346770 0.5378 deleterious NAA30 14 57857680 C T 29346770 0.8505 deleterious TOMM20L 14 58869468 G T 29346770 0.4849 deleterious KIAA0586 14 58965637 G A 29346770 0.0196 neutral SPTB 14 65220412 T C 29346770 0.4051 neutral PLEKHD1 14 69988999 G T 29346770 FLRT2 14 86089107 GT G 29346770 KCNK10 14 88652413 C T 29346770 CCDC88C 14 91766302 C T 29346770 0.7641 deleterious NUTM1 15 34649615 C T 29346770 PAK6 15 40566347 A G 29346770 0.9871 deleterious MGA 15 42058538 G A 29346770 0.1557 neutral SPTBN5 15 42142103 C T 29346770 0.0629 neutral DUOX2 15 45403691 C T 29346770 CGNL1 15 57810657 G C 29346770 0.8076 deleterious HERC1 15 64039940 G A 29346770 HERC1 15 64047525 C T 29346770 HCN4 15 73614963 G C 29346770 SCAPER 15 76726486 T C 29346770 0.0225 neutral CHRNA3 15 78909435 T C 29346770 0.9234 deleterious ZNF710 15 90611437 C G 29346770 0.9981 deleterious CHD2 15 93485051 G T 29346770 CHD2 15 93510727 C T 29346770 MSLNL 16 820594 C T 29346770 MSLNL 16 820596 A G 29346770 CACNA1H 16 1259233 C T 29346770 0.6523 deleterious HAGH 16 1866933 G A 29346770 0.0124 neutral RNF151 16 2018652 G A 29346770 0.0476 neutral SRRM2 16 2814953 G A 29346770 0.6385 deleterious OR1F1 16 3255016 C T 29346770 0.3053 neutral DNAJA3 16 4493080 C G 29346770 ERCC4 16 14041797 A C 29346770 0.3946 neutral COX6A2 16 31439149 A G 29346770 DNAJA2 16 47007418 G A 29346770 CPNE2 16 57157358 C G 29346770 0.9408 deleterious PLEKHG4 16 67315085 C T 29346770 EDC4 16 67915593 G A 29346770 DUS2 16 68100248 G A 29346770 0.0081 neutral MLKL 16 74709283 C G 29346770 0.0597 neutral ADAMTS18 16 77325261 G GTTTC 29346770 ADAD2 16 84229845 C T 29346770 FAM92B 16 85133773 G A 29346770 0.1362 neutral ANKRD11 16 89341340 T G 29346770 0.9304 deleterious PRPF8 17 1561966 G A 29346770 0.9927 deleterious OR1E1 17 3301128 G A 29346770 NTN1 17 9143210 G A 29346770 MAP2K4 17 11924221 G A 29346770 MAP2K4 17 11924226 G A 29346770 0.0683 neutral MAP2K4 17 11924235 G A 29346770 0.0256 neutral TRIM16L 17 18638245 G A 29346770 CCDC144NL 17 20799169 C T 29346770 NOS2 17 26096003 CT C 29346770 NEK8 17 27064851 C T 29346770 0.0092 neutral SLFN13 17 33768288 G A 29346770 0.2182 neutral GGNBP2 17 34934444 C T 29346770 ACACA 17 35487135 G A 29346770 0.3605 neutral ATP6V0A1 17 40666450 G A 29346770 0.9242 deleterious RUNDC1 17 41141433 C T 29346770 0.7575 deleterious PLEKHM1 17 43535724 T C 29346770 0.0013 neutral CDC27 17 45219311 T C 29346770 0.0257 neutral SGCA 17 48247675 C T 29346770 ACSF2 17 48539642 C T 29346770 0.1823 neutral TOM1L1 17 52978235 TG T 29346770 TLK2 17 60655885 A C 29346770 0.1607 neutral UBE2O 17 74392872 C G 29346770 0.8323 deleterious TSPAN10 17 79612099 G T 29346770 ANKRD12 18 9221974 CTGA C 29346770 MIB1 18 19444568 C T 29346770 0.8913 deleterious CDH2 18 25589713 G A 29346770 0.2473 neutral FHOD3 18 33877804 C T 29346770 CXXC1 18 47810914 G A 29346770 0.5118 deleterious AP3D1 19 2137725 C A 29346770 HMG20B 19 3573739 G A 29346770 0.1028 neutral MUC16 19 8976388 G GTGC 29346770 ZNF426 19 9640036 A G 29346770 0.0433 neutral ZNF440 19 11941128 A T 29346770 0.5384 deleterious PTGER1 19 14584644 C A 29346770 NOTCH3 19 15290891 T C 29346770 0.0098 neutral CYP4F11 19 16045146 C G 29346770 0.0367 neutral CHERP 19 16630447 T C 29346770 0.9175 deleterious CHERP 19 16643425 C G 29346770 0.9896 deleterious KIAA1683 19 18377276 C T 29346770 ELL 19 18557559 G C 29346770 0.1647 neutral MAG 19 35791072 G A 29346770 0.0279 neutral EGLN2 19 41306763 G A 29346770 0.1523 neutral ATP1A3 19 42474692 G A 29346770 1 deleterious CLPTM1 19 45490617 C G 29346770 0.1256 neutral GIPR 19 46180216 G A 29346770 0.0252 neutral LMTK3 19 48997119 T A 29346770 LMTK3 19 48997134 G A 29346770 SLC17A7 19 49937906 C T 29346770 ZNF841 19 52569251 G A 29346770 TMC4 19 54666461 G T 29346770 0.1176 neutral LILRA2 19 55098764 T C 29346770 0.0079 neutral USP29 19 57641305 T C 29346770 0.3085 neutral NCOA6 20 33345644 G A 29346770 SEMG1 20 43837010 C T 29346770 0.1097 neutral TFAP2C 20 55209316 T G 29346770 GID8 20 61572950 C T 29346770 CHRNA4 20 61981908 G A 29346770 ZGPAT 20 62366534 C T 29346770 0.5363 deleterious SLC2A4RG 20 62373543 G A 29346770 0.3243 neutral KRTAP25-1 21 31661638 ACC A 29346770 SON 21 34945653 G A 29346770 1 deleterious PIGP 21 38441914 G A 29346770 GAB4 22 17469020 G A 29346770 ZDHHC8 22 20130777 G A 29346770 0.9562 deleterious LZTR1 22 21345975 C T 29346770 0.8702 deleterious GAS2L1 22 29706675 G A 29346770 TOB2 22 41832929 C T 29346770 0.3149 neutral KLHDC7B 22 50987405 C T 29346770 ACE2 X 15607569 G A 29346770 PDHA1 X 19373601 C T 29346770 DDX3X X 41203604 G A 29346770 0.4004 neutral IQSEC2 X 53268427 C T 29346770 0.6895 deleterious COX7B X 77158235 G A 29346770 0.0515 neutral COX7B X 77158244 T C 29346770 0.6116 deleterious HNRNPH2 X 100667398 T A 29346770 0.0608 neutral SSR4 X 153062005 C T 29346770 FLNA X 153580387 C T 29346770 0.4562 neutral ASXL3 18 31323955 C 28990276 BCL11A 2 60689403 G C 28891213 MECP2 X 153296824 28785396 MECP2 X 153296399 28785396 PTEN 10 89692790 28250423 0.4072 neutral PTEN 10 89692908 28250423 0.9811 deleterious PTEN 10 89711882 28250423 TSC2 16 2136269 28250423 GDAP2 1 118426130 G A 28344757 ING3 7 120614925 A G 28344757 KDM2A 11 67007740 C CT 28344757 SLC16A1 1 113460234 A G 28344757 0.9995 deleterious EMILIN3 20 39991214 A G 28344757 0.942 deleterious PTPRZ1 7 121684623 G T 28344757 SETD1A 16 30975596 C T 28344757 0.1021 neutral LCE1A 1 152800137 G A 28344757 BTN2A1 6 26463682 T C 28344757 0.0431 neutral ANKRD40 17 48776796 A G 28344757 0.0999 neutral NKX2-8 14 37050458 G A 28344757 LRP2 2 170030556 G C 28344757 0.8903 deleterious PCNXL3 11 65403905 G A 28344757 TLCD2 17 1611428 C A 28344757 0.6577 deleterious ANK3 10 62023648 G A 28344757 0.0285 neutral CD163 12 7647881 C G 28344757 0.282 neutral EPHB3 3 184297701 C T 28344757 TALDO1 11 758966 A G 28344757 0.087 neutral SOX7 8 10583812 C T 28344757 SEMA4B 15 90771256 C T 28344757 0.0299 neutral MYH7B 20 33567509 C G 28344757 0.3484 neutral C6orf136 6 30615559 C G 28344757 0.0023 neutral KLHL26 19 18778486 C T 28344757 TBL3 16 2025006 C G 28344757 TAS1R2 1 19166809 G T 28344757 0.364 neutral OR8K3 11 56086068 T C 28344757 0.2183 neutral LRRC27 10 134158126 C T 28344757 GAB2 11 77938015 C G 28344757 0.1352 neutral CEP295 11 93458987 T C 28344757 RAPGEF3 12 48152505 A C 28344757 ZNF578 19 53015256 G GT 28344757 HPS5 11 18313160 T C 28344757 0.0034 neutral PRR14 16 30666220 G A 28344757 0.1116 neutral CCDC77 12 551033 AAG A 28344757 CDX2 13 28543127 A C 28344757 0.9977 deleterious FAM160B1 10 116621094 G A 28344757 MATN1 1 31194365 G A 28344757 0.7368 deleterious APMAP 20 24964537 A G 28344757 KRTAP2-3 17 39216220 G A 28344757 0.8137 deleterious ZZEF1 17 3978572 C T 28344757 0.9968 deleterious OLFM4 13 53624124 G A 28344757 0.3377 neutral WDR1 4 10117822 C T 28344757 0.4777 deleterious PDXDC1 16 15112743 G A 28344757 0.604 deleterious SPG7 16 89613072 C T 28344757 0.1251 neutral GRIK2 6 102483286 A G 28344757 0.3423 neutral PAPLN 14 73729315 G A 28344757 0.0581 neutral MAP3K13 3 185198194 G A 28344757 DLX6 7 96635679 C T 28344757 PRKD2 19 47181869 G A 28344757 0.0145 neutral EEF1D 8 144671359 G A 28344757 0.0189 neutral EEF1D 8 144671357 G A 28344757 0.0108 neutral CHD8 14 21873391 C T 28344757 0.999 deleterious CCDC37 3 126114864 T C 28344757 ZNF410 14 74353493 G C 28344757 RBP1 3 139257724 T C 28344757 0.0376 neutral WNT2B 1 113010107 C A 28344757 XRN1 3 142083987 C T 28344757 0.3149 neutral SMEK2 2 55825640 G C 28344757 DYNC1H1 14 102508760 G A 28344757 ATG2A 11 64667998 G A 28344757 0.076 neutral KIDINS220 2 8871599 C T 28344757 0.9695 deleterious RAC3 17 79990682 G A 28344757 0.9562 deleterious SMCHD1 18 2667020 A G 28344757 LSG1 3 194386345 C T 28344757 TIFA 4 113199374 G A 28344757 ZBTB2 6 151687957 T C 28344757 0.9705 deleterious PKP3 11 396860 C T 28344757 0.3794 deleterious UBR4 1 19403354 G C 28344757 0.5125 deleterious CACNA1E 1 181686288 C T 28344757 0.9758 deleterious DENND4A 15 66048521 A G 28344757 0.9726 deleterious ANKRD27 19 33135343 A G 28344757 0.9771 deleterious MAP6 11 75319204 G A 28344757 0.8272 deleterious NUP214 9 134000981 C G 28344757 RC3H1 1 173947674 G A 28344757 FGFR4 5 176520523 C T 28344757 HLA-DPB1 6 33053592 C T 28344757 0.2993 neutral ACOX3 4 8401309 C T 28344757 0.2768 neutral PSCA 8 143762748 C G 28344757 0.0103 neutral MRPS2 9 138392846 G T 28344757 0.0118 neutral ANKRD50 4 125591221 G T 28344757 0.8869 deleterious ASB17 1 76387833 C T 28344757 0.0083 neutral KRT37 17 39577674 G A 28344757 0.2328 neutral MUC2 11 1075819 C T 28344757 0.0078 neutral APOB 2 21229188 T G 28344757 0.5468 deleterious FOXP1 3 71027145 G GGACTT 28344757 PWP1 12 108090356 C T 28344757 0.6024 deleterious USP15 12 62778084 G A 28344757 PTPRN2 7 157959743 C T 28344757 0.0074 neutral C2 6 31896646 C T 28344757 0.0853 neutral WWC1 5 167887718 C A 28344757 0.0028 neutral ARHGEF33 2 39184185 A G 28344757 0.2792 neutral NR2F1 5 92920811 C T 28344757 ASH2L 8 37993231 G C 28344757 0.0171 neutral PLEKHA6 1 204237413 C T 28344757 0.0364 neutral AFMID 17 76183461 G T 28344757 0.2181 neutral VCAN 5 82833531 T G 28344757 0.0131 neutral OBSCN 1 228447223 A G 28344757 0.0862 neutral TYK2 19 10464269 C T 28344757 0.8918 deleterious IRF2 4 185320175 C T 28344757 NHLRC4 16 617668 G A 28344757 RNF43 17 56435546 G A 28344757 0.0016 neutral MYO1E 15 59487682 G A 28344757 0.5 deleterious WDR59 16 74927685 C T 28344757 0.5995 deleterious CEMIP 15 81224214 G C 28344757 0.7605 deleterious LIPH 3 185229388 T C 28344757 0.8186 deleterious FXYD5 19 35655068 CT C 28344757 KDM4A 1 44132164 C T 28344757 0.1292 neutral GNE 9 36246115 G A 28344757 0.8697 deleterious SSBP2 5 80714132 A G 28344757 CDCP2 1 54610291 T C 28344757 0.8203 deleterious CA10 17 50235121 A G 28344757 0.5125 deleterious LRFN1 19 39805743 G A 28344757 CYFIP2 5 156819928 G A 28344757 0.988 deleterious VWA8 13 42265576 C A 28344757 0.0896 neutral MYOCD 17 12656157 G T 28344757 0.9984 deleterious RBBP6 16 24580513 T C 28344757 TBXAS1 7 139652364 C T 28344757 KPTN 19 47986791 G T 28344757 SORD 15 45353297 C T 28344757 BCL9L 11 118779312 G A 28344757 0.135 neutral MAP3K6 1 27685327 A G 28344757 0.0195 neutral KDM5B 1 202719900 G A 28344757 AMIGO1 1 110050709 G A 28344757 0.0671 neutral ERCC6L X 71428206 G A 28344757 EPB41L1 20 34765932 A G 28344757 0.9995 deleterious PLEC 8 144998708 G A 28344757 0.7985 deleterious ITGA10 1 145534964 G A 28344757 0.0731 neutral ACAP2 3 195063205 G A 28344757 0.3257 neutral JAKMIP3 10 133950737 T 27848077 TRIM23 5 64892348 T 27848077 IFNA4 9 21187406 C 27848077 0.012 neutral PPP1R15A 19 49376940 C 27848077 POU3F4 X 82764134 G 27848077 NOC2L 1 881802 C T 24463507 0.7788 deleterious ADPRHL2 1 36557256 T C 24463507 0.995 deleterious SGIP1 1 67154953 G A 24463507 0.2047 neutral HMCN1 1 185985113 T C 24463507 KCNT2 1 196395019 C G 24463507 0.9714 deleterious MARK1 1 220835211 G A 24463507 KCNS3 2 18113537 TG T 24463507 SRBD1 2 45778322 T A 24463507 0.5763 deleterious ZNF638 2 71577361 AT A 24463507 CYP26B1 2 72362470 G A 24463507 0.8497 deleterious ALMS1 2 73800198 A C 24463507 0.1971 neutral SCN2A 2 166183403 T TA 24463507 ZNF804A 2 185798420 C T 24463507 0.9886 deleterious MYRIP 3 40085652 C T 24463507 0.0342 neutral SETD2 3 47164140 T C 24463507 QRICH1 3 49114314 TG T 24463507 WHSC1 4 1920309 GC G 24463507 N4BP2 4 40104472 C G 24463507 0.0428 neutral ANK2 4 114264189 C G 24463507 0.5164 deleterious SEMA6A 5 115840614 A T 24463507 REEP2 5 137781275 G A 24463507 PCDHGB1 5 140731183 C T 24463507 FAT2 5 150930211 C G 24463507 SLC34A1 5 176824788 C T 24463507 0.9993 deleterious MDC1 6 30681921 A G 24463507 0.4896 deleterious MSH5 6 31726346 G A 24463507 0.1408 neutral UBR2 6 42627568 C G 24463507 0.5125 deleterious RUNX2 6 45390457 G A 24463507 BEND3 6 107391881 T C 24463507 0.0941 neutral SYNE1 6 152728223 C T 24463507 0.021 neutral ARID1B 6 157527390 C CG 24463507 ZNF804B 7 88963885 A T 24463507 0.3791 neutral ZSCAN21 7 99661772 A G 24463507 MUC17 7 100696348 G C 24463507 ST7 7 116593742 A C 24463507 0.3325 neutral IQUB 7 123109383 G A 24463507 0.7333 deleterious ABCF2 7 150915221 C A 24463507 LMBR1 7 156619374 T C 24463507 0.8201 deleterious RP1L1 8 10468390 C T 24463507 0.2433 neutral MCM4 8 48874628 T C 24463507 0.8672 deleterious MCM4 8 48883927 G A 24463507 NOL6 9 33468867 G A 24463507 ANXA1 9 75777757 G A 24463507 0.4809 deleterious PRUNE2 9 79325023 G A 24463507 0.026 neutral RPL35 9 127620304 G A 24463507 0.8988 deleterious CDH23 10 73491982 C T 24463507 RRP12 10 99160118 C T 24463507 0.0217 neutral CYP17A1 10 104595121 C T 24463507 0.2283 neutral NLRP6 11 284614 C A 24463507 0.0048 neutral KCNQ1 11 2683228 C T 24463507 OR51A2 11 4976751 G GA 24463507 ZNF215 11 6977626 G A 24463507 0.0664 neutral LGR4 11 27390002 A G 24463507 LRP5 11 68174018 G A 24463507 0.8809 deleterious PPP2R1B 11 111631749 C A 24463507 MANSC1 12 12483027 T C 24463507 GAS2L3 12 101011562 T A 24463507 CCDC53 12 102437956 A G 24463507 0.4467 neutral TCTN2 12 124191337 C T 24463507 0.1115 neutral TMEM132B 12 126139127 C T 24463507 ULK1 12 132400965 C T 24463507 0.2474 neutral GPC5 13 92560202 G A 24463507 0.1592 neutral TGM1 14 24724606 G A 24463507 0.955 deleterious PRKD1 14 30102082 T C 24463507 0.8391 deleterious TCL1B 14 96152831 A G 24463507 TNFAIP2 14 103598072 G A 24463507 AHNAK2 14 105423814 C T 24463507 0.3307 neutral COPS2 15 49429353 C T 24463507 MAP2K1 15 66729163 C T 24463507 0.9638 deleterious ZNF774 15 90904162 A G 24463507 0.9342 deleterious SCNN1G 16 23224460 G A 24463507 0.2753 deleterious TNRC6A 16 24835108 G T 24463507 0.998 deleterious MAPK3 16 30128162 G A 24463507 0.0055 neutral ZNF423 16 49670329 G A 24463507 0.2223 neutral ZNF423 16 49671585 T C 24463507 0.6674 deleterious METTL16 17 2371131 A G 24463507 0.9988 deleterious MYO15A 17 18047280 A G 24463507 0.8078 deleterious TBC1D28 17 18541660 T A 24463507 0.3298 neutral LLGL2 17 73539565 C T 24463507 SOGA2 18 8783786 G A 24463507 NMRK2 19 3938710 G A 24463507 ETHE1 19 44015690 T C 24463507 0.9987 deleterious CHMP2A 19 59063080 G C 24463507 0.1403 neutral SLC4A11 20 3218211 T C 24463507 0.0068 neutral TM9SF4 20 30738473 T A 24463507 0.9985 deleterious KRTAP13-4 21 31802727 C T 24463507 0.6051 deleterious DYRK1A 21 38877655 C T 24463507 CCDC116 22 21989210 C T 24463507 ZNF280B 22 22842831 T C 24463507 0.157 neutral BAIAP2L2 22 38483172 G T 24463507 PKDREJ 22 46652879 T C 24463507 0.6196 deleterious TLR7 X 12905843 C T 24463507 0.8122 deleterious ZMYM3 X 70470552 T C 24463507 0.8472 deleterious PRRG3 X 150868627 C T 24463507 0.4438 neutral MED13L 12 116446528 G A 25533962 ARID1B 6 157527679 C T 25533962 MLL 11 118373178 C T 25533962 DYRK1A 21 38850535 AC A 25533962 CASK X 41519760 G A 25533962 0.9635 deleterious PTPN11 12 112926887 G A 25533962 0.9864 deleterious SCN2A 2 166172031 TG T 25533962 SCN2A 2 166179687 TC T 25533962 WDR45 X 48935752 C G 25533962 0.2242 neutral BCL11A 2 60773348 C A 25533962 0.9732 deleterious ADNP 20 49508751 CTTTATTTA CTTTA 25533962 ARID1B 6 157222647 C A 25533962 STXBP1 9 130435529 C T 25533962 SCN2A 2 166165305 G A 25533962 ANKRD11 16 89349242 CTGTTT CT 25533962 SYNGAP1 6 33400477 C T 27334371 SCN2A 2 166166923 C T 27334371 0.9996 deleterious EFTUD2 17 42931953 T G 27334371 0.8816 deleterious MED12 X 70349234 G A 27334371 0.5537 deleterious ZMYND11 10 298399 C T 27334371 0.5138 neutral BAZ1A 14 35231162 A C 27334371 0.0465 neutral SLCO2A1 3 133653644 C T 27334371 CLCNKB 1 16376358 23849776 0.2456 neutral MOV10 1 113235478 23849776 0.105 neutral CCDC19 1 159846398 23849776 NAV1 1 201687561 23849776 0.8286 deleterious KIAA1217 10 24802273 23849776 0.5963 deleterious SFTPD 10 81702258 23849776 0.6319 deleterious SLK 10 105768025 23849776 0.935 deleterious CAPRIN1 11 34107924 23849776 ZFPL1 11 64852255 23849776 0.3114 neutral FAT3 11 92600180 23849776 0.5186 deleterious TBC1D30 12 65269243 23849776 0.002 neutral HCAR1 12 123213933 23849776 KIAA0284 14 105354151 23849776 COPS2 15 49426143 23849776 0.998 deleterious INPP5K 17 1411432 23849776 0.0123 neutral DCAKD 17 43111636 23849776 DNMT3A 2 25466800 23849776 0.3113 neutral ARID5A 2 97215971 23849776 0.79 deleterious ARL6IP6 2 153575211 23849776 0.0134 neutral SNX5 20 17923824 23849776 0.5007 deleterious MICAL3 22 18387403 23849776 0.9836 deleterious MAP4 3 47957453 23849776 0.0103 neutral COL7A1 3 48621941 23849776 0.329 neutral IMPDH2 3 49064457 23849776 0.1613 neutral STXBP5L 3 120628487 23849776 0.0015 neutral AHRR 5 422895 23849776 0.3953 deleterious ITK 5 156679654 23849776 0.4986 deleterious SLIT3 5 168175351 23849776 SYNE1 6 152771947 23849776 0.3053 neutral VIP 6 153075412 23849776 LRRC4 7 127670456 23849776 0.9764 deleterious LRGUK 7 133842813 23849776 SOX7 8 10583692 23849776 DCAF13 8 104439424 23849776 0.005 neutral LAMC3 9 133942350 23849776 0.672 deleterious MXRA5 X 3248358 23849776 0.8912 deleterious KAL1 X 8522080 23849776 WWC3 X 10104728 23849776 0.9939 deleterious NR0B1 X 30327222 23849776 0.2428 neutral USP9X X 41025124 24690944 ADP 20 49509094 G GT 25418537 CHD8 14 21859175 A AT 25418537 CHD8 14 21899618 G C 25418537 CHD8 14 21871373 T C 25418537 CHD8 14 21854022 GGGT G 25418537 CHD8 14 21878133 G GT 25418537 CHD8 14 21861643 TCTTC T 25418537 CTB1 3 41275346 G A 25418537 GPRASP1 X 101912545 C T 25418537 0.9882 deleterious GRI2B 12 13768560 C T 25418537 0.9011 deleterious GRI2B 12 13764762 C T 25418537 GRI2B 12 14019043 T TG 25418537 PAX5 9 37033983 C G 25418537 0.9922 deleterious PTE 10 89692908 C T 25418537 0.9892 deleterious PTE 10 89692920 T TA 25418537 TBL1XR1 3 176767858 A T 25418537 0.9488 deleterious TBR1 2 162273603 A G 25418537 0.9691 deleterious VCP 9 35061615 T G 25418537 0.9991 deleterious AK2 4 114280060 A T 25621899 CACB2 10 18429670 T A 25621899 DAH10 12 124383277 C A 25621899 DAH10 12 124413069 C T 25621899 KIF11 10 94373234 G 25621899 KIF2A 5 61681329 G A 25621899 KMT2D 12 49440421 G A 25621899 LRRC7 1 70291464 GTAA 25621899 LG1 3 173996749 G A 25621899 PER2 2 239164427 C T 25621899 RAD21 8 117874114 A G 25621899 RELN 7 103194122 G T 25621899 SC2A 2 166222808 25621899 SHAK3 22 51121807 AG 25621899 STXBP1 9 130444717 C 25621899 THRA 17 38245626 C T 25621899 BAG6 6 31609641 T TG 26076356 DCBLD1 6 117866761 GTAA G 26076356 EFCAB11 14 90420964 TCCCACG T 26076356 ITGAV 2 187541639 GTTTT G 26076356 T 5 43613187 GTGCCCAAATCCAA G 26076356 PRSS3 9 33797928 G GCT 26076356 TPTE 21 10910400 CTA C 26076356 ZF595 4 85969 G GA 26076356 ABCA6 17 67136812 T G 26325558 0.9731 deleterious ABLIM1 10 116233698 C T 26325558 ACE 17 61559007 CTGGGAAGGGTCGATG 26325558 ACSL5 10 114170349 G A 26325558 0.147 neutral ADSS 1 244587309 C T 26325558 0.9973 deleterious AQPEP 5 115323514 G C 26325558 0.8066 deleterious AREL1 14 75151253 G 26325558 ARHGAP31 3 119109669 C T 26325558 ARMC4 10 28149756 T A 26325558 0.0053 neutral ASH1L 1 155324288 G A 26325558 ATG4B 2 242611640 C T 26325558 CDK8 13 26967554 A G 26325558 0.9469 deleterious CEP192 18 13019104 A G 26325558 0.0024 neutral COL28A1 7 7514248 G C 26325558 CUL7 6 43018958 G A 26325558 DCHS1 11 6644563 G A 26325558 0.0118 neutral DPY19L4 8 95774047 G A 26325558 EFTUD2 17 42932002 C T 26325558 ELMOD1 11 107501449 A C 26325558 0.1079 neutral EPCAM 2 47612316 A G 26325558 ESPL 2 239040083 G A 26325558 0.2441 neutral FAM120B 6 170632250 C G 26325558 FAXC 6 99771430 G A 26325558 0.3535 neutral FBP2 9 97333814 G A 26325558 0.9876 deleterious G3BP1 5 151166277 G A 26325558 GBF1 10 104129511 G A 26325558 0.9381 deleterious GDF2 10 48414275 T C 26325558 0.0017 neutral GMPS 3 155615774 G T 26325558 0.5125 deleterious GOLPH3L 1 150636154 T C 26325558 0.1122 neutral GPR171 3 150916649 A G 26325558 HIST1H2AD 6 26199346 C T 26325558 HIST1H2BJ 6 27100214 C A 26325558 HTR5A 7 154876164 C A 26325558 0.592 deleterious IGLL5 22 23230296 G C 26325558 0.2259 neutral IPP5F 10 121579002 C G 26325558 0.0567 neutral KIAA1024 15 79750388 A T 26325558 0.191 neutral KIF27 9 86518307 C T 26325558 0.01 neutral KLHL18 3 47376220 G A 26325558 0.9864 deleterious KRT31 17 39551867 A G 26325558 LDLR 19 11213417 G A 26325558 0.9435 deleterious LEG9 19 54973833 G A 26325558 0.0608 neutral LMX1B 9 129458577 C T 26325558 LRP6 12 12288208 C T 26325558 0.9767 deleterious MARCO 2 119739065 G A 26325558 0.9857 deleterious MARK1 1 220835359 G A 26325558 0.1084 neutral MAST4 5 66400357 G C 26325558 0.9795 deleterious MCM8 20 5933079 C T 26325558 0.1678 neutral MTHFSD 16 86585881 G C 26325558 MUC15 11 26587227 T C 26325558 0.0048 neutral AB1 2 191524448 G A 26325558 AGA 22 42463262 G A 26325558 BAS 2 15417138 G A 26325558 BAS 2 15417139 T A 26325558 0.7424 deleterious CK2 2 106471675 G A 26325558 OR2M5 1 248309147 G C 26325558 0.1768 neutral OR4E2 14 22133323 G T 26325558 OR5F1 11 55761926 A G 26325558 0.8681 deleterious PCLO 7 82584377 C T 26325558 PDIA5 3 122864390 T C 26325558 0.753 deleterious PEX11G 19 7553881 C A 26325558 0.8743 deleterious PHKB 16 47614206 C G 26325558 0.0695 neutral POTEA 8 43157164 T C 26325558 PRMT7 16 68389650 A G 26325558 0.4875 neutral PRR14L 22 32112105 T C 26325558 0.1271 neutral PRR19 19 42813829 G C 26325558 0.4428 neutral PSMD6 3 63996422 C T 26325558 PTP13 4 87705691 C A 26325558 0.0077 neutral PZP 12 9317793 C G 26325558 0.7415 deleterious RFX6 6 117248533 C A 26325558 0.058 neutral RGS12 4 3317988 G A 26325558 0.9625 deleterious RORA 15 60806943 CTC 26325558 RYR1 19 39025386 C T 26325558 SCAF1 19 50156162 T C 26325558 0.4643 deleterious SC2A 2 166237202 G C 26325558 0.9058 deleterious SCUBE2 11 9111335 C T 26325558 0.0656 neutral SERIC5 5 79465157 C T 26325558 SLC20A2 8 42287662 T C 26325558 SPARCL1 4 88412805 G A 26325558 0.0081 neutral SPEF2 5 35740319 G A 26325558 0.8532 deleterious STOML2 9 35101724 G A 26325558 TALDO1 11 760129 T C 26325558 0.9863 deleterious TAGO2 22 20050958 G A 26325558 TDRD1 10 115973247 G A 26325558 TRC6B 22 40660882 C G 26325558 TOP2B 3 25671897 G A 26325558 0.9882 deleterious TPM3 1 154143940 C T 26325558 TRIM23 5 64892877 C T 26325558 TRIOBP 22 38131444 C G 26325558 0.4763 deleterious TRIOBP 22 38131445 T G 26325558 0.6833 deleterious USP3 15 63824890 A G 26325558 0.3406 neutral USP51 X 55513637 G A 26325558 0.9718 deleterious WAC 10 28879727 GCAAGCAACA 26325558 WAC 10 28879727 GCAAGCAACA 26325558 XIRP2 2 168103257 T C 26325558 ZDHHC14 6 158094104 T C 26325558 0.183 neutral AK3 10 61835934 T G 22865819 ADCY5 3 121567092 C 23160955 ADP 20 50075687 23160955 ARID1B 6 157469113 23160955 CHD8 14 22829778 G 23160955 CHD8 14 22808293 23160955 CHD8 14 22801533 T 23160955 CHD8 14 22800329 G 23160955 CHD8 14 22791803 23160955 CHD8 14 22789335 23160955 CHD8 14 22784182 23160955 CTB1 3 41300342 G 23160955 DYRK1A 21 39923246 23160955 DYRK1A 21 39955963 23160955 GRI2B 12 14127776 23160955 GRI2B 12 13877293 C 23160955 GRI2B 12 13873495 C 23160955 LAMC3 9 134962869 A 23160955 PTE 10 89702928 C 23160955 PTE 10 89702940 23160955 SBF1 22 0 G 23160955 SC1A 2 167139760 T 23160955 SETD2 3 47191001 T 23160955 SGSM3 22 42475019 A 23160955 TBL1XR1 3 175269353 23160955 TBR1 2 162565357 A 23160955 TBR1 2 162567235 23160955 UBE3C 7 157356883 T 23160955 ADCY5 3 121563915 G 23160955 ADP 20 50076620 23160955 ARID1B 6 157485972 23160955 CHD8 14 22801338 G 23160955 CHD8 14 22791536 23160955 CTB1 3 41300753 C 23160955 DYRK1A 21 39943596 G 23160955 GRI2B 12 13831686 T 23160955 LAMC3 9 134924469 A 23160955 TG1 1 107889760 A 23160955 TG1 1 108065538 C 23160955 PTE 10 89721902 C 23160955 SBF1 22 0 T 23160955 SC1A 2 167139825 G 23160955 SETD2 3 47123928 23160955 SGSM3 22 42472643 C 23160955 TBL1XR1 3 175282413 A 23160955 TBR1 2 162565076 23160955 UBE3C 7 157348353 C 23160955 TSC2 16 2105504 A G 29271092 0.9802 deleterious TSC2 16 2105504 A G 29271092 0.9802 deleterious AKRD20A4 9 69409974 G A 28965761 TBC1D3G 17 34797651 A AG 28965761 TCEB3C 18 44549025 T TGC 28965761 PIPB5 16 22545935 C G 28965761 GLIPR1L2 12 75796795 A C 28965761 SMIM22 16 4846043 CTGGAAGGTGAGCCCT C 28965761 PHIP 6 79735235 CTTTAT C 28965761 VARS 6 31746848 G A 28965761 PCM1 8 17782220 A G 28965761 FBP4 11 47788778 AC A 28965761 PAK1IP1 6 10695304 T G 28965761 CTAP3 9 39078705 G A 28965761 DM1 9 131013111 T TG 28965761 MPLKIP 7 40173984 G T 28965761 ARID1B 6 157100567 AG A 28965761 GGT1 22 25024161 G A 28965761 LOC400891 22 21407765 G C 28965761 DUSP15 20 30457849 A G 28965761 PIWIL3 22 25157845 C T 28965761 BCAR3 1 94049574 C A 28965761 MUST1 3 52867631 A T 28965761 LYPD2 8 143831747 TGGAG T 28965761 CAMSAP1 9 138713880 G GATGCCAGGAGGCTGGCGGGATCC 28965761 MUC5B 11 1255489 CT C 28965761 EFCAB6 22 43933284 CCT C 28965761 PCT 21 47831556 C T 28965761 IGDCC4 15 65678205 GCCACC G 28965761 TEX33 22 37398027 G A 28965761 LILRA6 19 54746568 A T 28965761 PXDL 8 52321720 TC T 28965761 SH3GL1 19 4362618 T TG 28965761 ZF774 15 90903409 GA G 28965761 AGO1 1 36367566 C G 28965761 C16orf11 16 614182 T TC 28965761