Variant Details for GRID2
Basic Information Top
| Gene Symbol: | GRID2 ( MGC117022,MGC117023,MGC117024 ) |
|---|---|
| Gene Full Name: | glutamate receptor, ionotropic, delta 2 |
| Band: | 4q22.1-q22.2 |
| Quick Links | Entrez ID:2895; OMIM: 602368; Uniprot ID:GRID2_HUMAN; ENSEMBL ID: ENSG00000152208; HGNC ID: 4576 |
| Relate to Another Database: | SFARIGene; denovo-db |
Variant Statistic TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default. Chromosome coordinates: hg19
| Genetic Category | CNVs/SVs | de novo Mutations | Mosaics SNVs | NGS Other Mutations | Low-Scale Gene Mutations | Linkage Regions | Total |
|---|---|---|---|---|---|---|---|
| Number | 4 | 2 | 0 | 0 | 0 | 1 | 7 |
CNVs/SVs Top| CNV ID | Chr | Band | Start | End | Size | Gain/Loss | UCSC Browser | Reference |
|---|---|---|---|---|---|---|---|---|
| AutCNV0000130 | 4 | 4q21-23 | 86426849 | 103726763 | 17299914 | loss | external link | Jacquemont, 2006 |
| AutCNV0004237 | 4 | 4q22.1-q22.2 | 93285927 | 94417245 | 1131318 | gain | external link | Sanders, 2011 |
| AutCNV0004685 | 4 | 4q22.2 | 94144621 | 94172410 | 27789 | loss | external link | Gazzellone MJ, 2014 |
| AutCNV0005623 | 4 | 4 | gain | Mercati O, 2017 |
NGS de novo Mutations TopiFish (integrated Functional inference of SNVs in human) is based on gene/gene family customized models to classify missense mutations.
| Chr | Pos | Ref | Alt | Coding | AA | Validated Method | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| 4 | 94377044 | C | G | Sanger sequencing | neutral | 0.2351 | De Rubeis S, 2014 | ||
| 4 | 93564738 | C | T | Sequenom | Michaelson JJ, 2012 |
NGS Mosaic Mutations Top| Chr | Position | Ref | Alt | Genotype | Validated Method | Reference |
|---|---|---|---|---|---|---|
| No related data! | ||||||
NGS Other Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Low-Scale Gene Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Linkage Regions Top| Linkage Name | Band | Chr | Marker | LOD | NPL | P Value | Reference |
|---|---|---|---|---|---|---|---|
| AutLD0000012 | 4q21.23-22.3 | 4 | D4S2361/D4S2909 | 1.72 | - | - | Yonan, 2003 |