Variant Details for ANKRD11
Basic Information Top
Gene Symbol: | ANKRD11 ( ANCO-1,ANCO1,LZ16,T13 ) |
---|---|
Gene Full Name: | ankyrin repeat domain 11 |
Band: | 16q24.3 |
Quick Links | Entrez ID:29123; OMIM: 611192; Uniprot ID:ANR11_HUMAN; ENSEMBL ID: ENSG00000167522; HGNC ID: 21316 |
Relate to Another Database: | SFARIGene; denovo-db |
Variant Statistic Top
Click the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default. Chromosome coordinates: hg19
Genetic Category | CNVs/SVs | de novo Mutations | Mosaics SNVs | NGS Other Mutations | Low-Scale Gene Mutations | Linkage Regions | Total |
---|---|---|---|---|---|---|---|
Number | 9 | 4 | 0 | 3 | 11 | 0 | 27 |
CNVs/SVs Top
CNV ID | Chr | Band | Start | End | Size | Gain/Loss | UCSC Browser | Reference |
---|---|---|---|---|---|---|---|---|
AutCNV0000153 | 16 | 16q24.3 | 89273092 | 89538759 | 265667 | loss | external link | Marshall, 2008 |
AutCNV0000684 | 16 | 16q24.2-24.3 | 87502499 | 89602499 | 2100000 | loss | external link | Willemsen, 2010 |
AutCNV0000683 | 16 | 16q24.3 | 89272499 | 89532499 | 260000 | loss | external link | Willemsen, 2010 |
AutCNV0000695 | 16 | 16q24.3 | 88672499 | 90294753 | 1622254 | gain | external link | Berkel, 2010 |
AutCNV0000685 | 16 | 16q24.2-24.3 | 88232499 | 89362499 | 1130000 | loss | external link | Willemsen, 2010 |
AutCNV0004358 | 16 | 16q24.3 | 89273092 | 89538759 | 265667 | loss | external link | Sanders, 2011 |
AutCNV0005767 | 16 | gain | C Yuen RK, 2017 | |||||
AutCNV0005766 | 16 | gain | C Yuen RK, 2017 | |||||
AutCNV0005765 | 16 | gain | C Yuen RK, 2017 |
NGS de novo Mutations Top
iFish (integrated Functional inference of SNVs in human) is based on gene/gene family customized models to classify missense mutations.
Chr | Pos | Ref | Alt | Coding | AA | Validated Method | iFish Prediction | iFish Probability | Reference |
---|---|---|---|---|---|---|---|---|---|
16 | 89350771 | CTTTG | C | PCR amplification and Sanger s | Dong S, 2014 | ||||
16 | 89341340 | T | G | c.7595A>C | p.Gln2532Pro | Sanger sequencing | deleterious | 0.9304 | Takata A, 2018 |
0 | c.6472G>T | p.Glu2158Ter | Bowling KM, 2017 | ||||||
16 | 89349242 | CTGTTT | CT | Deciphering Developmental , 2015 |
NGS Mosaic Mutations Top
Chr | Position | Ref | Alt | Genotype | Validated Method | Reference |
---|---|---|---|---|---|---|
No related data! |
NGS Other Mutations Top
Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
---|---|---|---|---|---|---|---|---|---|
16 | 89346082 | C | T | p.P2290S | Y | Brett M, 2014 | |||
16 | 89351565 | p.T461R | Y | Butler MG, 2015 | |||||
16 | 89459723 | T | - | Doan RN, 2016 |
Low-Scale Gene Mutations Top
Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
---|---|---|---|---|---|---|---|---|---|
16 | c.7481dup | p.Pro2495fs | Y | Ockeloen CW, 2015 | |||||
16 | c.4391_4392del | p.Lys1464fs | Y | Ockeloen CW, 2015 | |||||
16 | c.6184del | p.Leu2062fs | Y | Ockeloen CW, 2015 | |||||
16 | c.3123_3126del | p.Ile1042fs | Y | Ockeloen CW, 2015 | |||||
16 | c.1460_1463del | p.Glu487fs | Y | Ockeloen CW, 2015 | |||||
16 | c.1903_1907del | p.Lys635fs | Y | Ockeloen CW, 2015 | |||||
16 | c.3832A>T | p.Lys1278a | Y | Ockeloen CW, 2015 | |||||
16 | c.2751dup | p.Glu918a | Y | Ockeloen CW, 2015 | |||||
16 | c.3382_3383del | p.Asp1128fs | Y | Ockeloen CW, 2015 | |||||
16 | c.6513dup | p.Gly2172fs | Y | Ockeloen CW, 2015 | |||||
16 | c.1318C>T | p.Arg440a | Y | Ockeloen CW, 2015 |
Linkage Regions Top
Linkage Name | Band | Chr | Marker | LOD | NPL | P Value | Reference |
---|---|---|---|---|---|---|---|
No related data! |