Variant Details for HCG26
Basic Information Top
| Gene Symbol: | HCG26 ( 3.8-1,NCRNA00191,bCX205D4.4,bPG181B23.4 ) |
|---|---|
| Gene Full Name: | HLA complex group 26 (non-protein coding) |
| Band: | 6p21.3 |
| Quick Links | Entrez ID:352961; OMIM: NA; Uniprot ID:; ENSEMBL ID: ; HGNC ID: 29671 |
| Relate to Another Database: | SFARIGene; denovo-db |
Variant Statistic TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default. Chromosome coordinates: hg19
| Genetic Category | CNVs/SVs | de novo Mutations | Mosaics SNVs | NGS Other Mutations | Low-Scale Gene Mutations | Linkage Regions | Total |
|---|---|---|---|---|---|---|---|
| Number | 6 | 0 | 0 | 0 | 0 | 0 | 6 |
CNVs/SVs Top| CNV ID | Chr | Band | Start | End | Size | Gain/Loss | UCSC Browser | Reference |
|---|---|---|---|---|---|---|---|---|
| AutCNV0000488 | 6 | 6p21.32-21.33 | 31405443 | 32199000 | 793557 | gain | external link | Gregory, 2009 |
| AutCNV0002586 | 6 | 6p21.33 | 31360255 | 31453640 | 93385 | gain | external link | Pinto, 2010 |
| AutCNV0001802 | 6 | 6p21.33 | 31360255 | 31454365 | 94110 | gain | external link | Pinto, 2010 |
| AutCNV0001801 | 6 | 6p21.33 | 31356842 | 31454887 | 98045 | loss | external link | Pinto, 2010 |
| AutCNV0001800 | 6 | 6p21.33 | 31356842 | 31454365 | 97523 | gain | external link | Pinto, 2010 |
| AutCNV0000699 | 6 | 6p21 | 29792021 | 45092022 | 15300001 | gain | external link | Berkel, 2010 |
NGS de novo Mutations TopiFish (integrated Functional inference of SNVs in human) is based on gene/gene family customized models to classify missense mutations.
| Chr | Pos | Ref | Alt | Coding | AA | Validated Method | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
NGS Mosaic Mutations Top| Chr | Position | Ref | Alt | Genotype | Validated Method | Reference |
|---|---|---|---|---|---|---|
| No related data! | ||||||
NGS Other Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Low-Scale Gene Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Linkage Regions Top| Linkage Name | Band | Chr | Marker | LOD | NPL | P Value | Reference |
|---|---|---|---|---|---|---|---|
| No related data! | |||||||