Variant Details for FAM19A1
Basic Information Top
| Gene Symbol: | FAM19A1 ( TAFA-1,TAFA1 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 19 (chemokine (C-C motif)-like), member A1 |
| Band: | 3p14.1 |
| Quick Links | Entrez ID:407738; OMIM: NA; Uniprot ID:F19A1_HUMAN; ENSEMBL ID: ENSG00000183662; HGNC ID: 21587 |
| Relate to Another Database: | SFARIGene; denovo-db |
Variant Statistic TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default. Chromosome coordinates: hg19
| Genetic Category | CNVs/SVs | de novo Mutations | Mosaics SNVs | NGS Other Mutations | Low-Scale Gene Mutations | Linkage Regions | Total |
|---|---|---|---|---|---|---|---|
| Number | 6 | 0 | 0 | 2 | 0 | 0 | 8 |
CNVs/SVs Top| CNV ID | Chr | Band | Start | End | Size | Gain/Loss | UCSC Browser | Reference |
|---|---|---|---|---|---|---|---|---|
| AutCNV0000208 | 3 | 3p14.1 | 67656830 | 68957206 | 1300376 | loss | external link | Christian, 2008 |
| AutCNV0000138 | 3 | 3p14.1-13 | 65311260 | 70550510 | 5239250 | loss | external link | Marshall, 2008 |
| AutCNV0004225 | 3 | 3p13-p14.1 | 67140582 | 72273331 | 5132749 | loss | external link | Sanders, 2011 |
| AutCNV0004223 | 3 | 3p14.1 | 65311260 | 70550510 | 5239250 | loss | external link | Sanders, 2011 |
| AutCNV0003805 | 3 | 3p14.1-p13 | 67136778 | 72259085 | 5122307 | loss | external link | Levy, 2011 |
| AutCNV0003524 | 3 | 3p14.1 | 67619472 | 69022919 | 1403447 | loss | external link | Gai, 2011 |
NGS de novo Mutations TopiFish (integrated Functional inference of SNVs in human) is based on gene/gene family customized models to classify missense mutations.
| Chr | Pos | Ref | Alt | Coding | AA | Validated Method | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
NGS Mosaic Mutations Top| Chr | Position | Ref | Alt | Genotype | Validated Method | Reference |
|---|---|---|---|---|---|---|
| No related data! | ||||||
NGS Other Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| 3 | 68193136 | T | - | Doan RN, 2016 | |||||
| 3 | 68193147 | - | T | Doan RN, 2016 |
Low-Scale Gene Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Linkage Regions Top| Linkage Name | Band | Chr | Marker | LOD | NPL | P Value | Reference |
|---|---|---|---|---|---|---|---|
| No related data! | |||||||