Variant Details for OPCML
Basic Information Top
| Gene Symbol: | OPCML ( IGLON1,OBCAM,OPCM ) |
|---|---|
| Gene Full Name: | opioid binding protein/cell adhesion molecule-like |
| Band: | 11q25 |
| Quick Links | Entrez ID:4978; OMIM: 600632; Uniprot ID:OPCM_HUMAN; ENSEMBL ID: ENSG00000183715; HGNC ID: 8143 |
| Relate to Another Database: | SFARIGene; denovo-db |
Variant Statistic TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default. Chromosome coordinates: hg19
| Genetic Category | CNVs/SVs | de novo Mutations | Mosaics SNVs | NGS Other Mutations | Low-Scale Gene Mutations | Linkage Regions | Total |
|---|---|---|---|---|---|---|---|
| Number | 7 | 1 | 0 | 0 | 0 | 0 | 8 |
CNVs/SVs Top| CNV ID | Chr | Band | Start | End | Size | Gain/Loss | UCSC Browser | Reference |
|---|---|---|---|---|---|---|---|---|
| AutCNV0000093 | 11 | 11q23.2-25 | 113996790 | 134897790 | 20901000 | gain | external link | Szatmari, 2007 |
| AutCNV0000362 | 11 | 11q25 | 130794790 | 134946516 | 4151726 | external link | Zwaag, 2009 | |
| AutCNV0002015 | 11 | 11q25 | 132882164 | 132932983 | 50819 | gain | external link | Pinto, 2010 |
| AutCNV0003337 | 11 | 11q25 | 133110021 | 133336402 | 226381 | gain | external link | Gai, 2011 |
| AutCNV0003336 | 11 | 11q25 | 133093579 | 133336562 | 242983 | gain | external link | Gai, 2011 |
| AutCNV0004297 | 11 | 11q24.2-q25 | 127128729 | 132555164 | 5426435 | loss | external link | Sanders, 2011 |
| AutCNV0005098 | 8 | 8q22.2q22.3 | 100142380 | 103492901 | 3350521 | loss | external link | Sinajon P, 2015 |
NGS de novo Mutations TopiFish (integrated Functional inference of SNVs in human) is based on gene/gene family customized models to classify missense mutations.
| Chr | Pos | Ref | Alt | Coding | AA | Validated Method | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| 11 | 133255038 | C | T | Sanger and Sequenom | Michaelson JJ, 2012 |
NGS Mosaic Mutations Top| Chr | Position | Ref | Alt | Genotype | Validated Method | Reference |
|---|---|---|---|---|---|---|
| No related data! | ||||||
NGS Other Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Low-Scale Gene Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Linkage Regions Top| Linkage Name | Band | Chr | Marker | LOD | NPL | P Value | Reference |
|---|---|---|---|---|---|---|---|
| No related data! | |||||||