Variant Details for LRRN3
Basic Information Top
| Gene Symbol: | LRRN3 ( FIGLER5,FLJ11129,NLRR-3,NLRR3 ) |
|---|---|
| Gene Full Name: | leucine rich repeat neuronal 3 |
| Band: | 7q31.1 |
| Quick Links | Entrez ID:54674; OMIM: NA; Uniprot ID:LRRN3_HUMAN; ENSEMBL ID: ENSG00000173114; HGNC ID: 17200 |
| Relate to Another Database: | SFARIGene; denovo-db |
Variant Statistic TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default. Chromosome coordinates: hg19
| Genetic Category | CNVs/SVs | de novo Mutations | Mosaics SNVs | NGS Other Mutations | Low-Scale Gene Mutations | Linkage Regions | Total |
|---|---|---|---|---|---|---|---|
| Number | 4 | 0 | 0 | 0 | 1 | 1 | 6 |
CNVs/SVs Top| CNV ID | Chr | Band | Start | End | Size | Gain/Loss | UCSC Browser | Reference |
|---|---|---|---|---|---|---|---|---|
| AutCNV0000142 | 7 | 7q31.1-31.31 | 108606430 | 119629936 | 11023506 | loss | external link | Marshall, 2008 |
| AutCNV0000668 | 7 | 7q31.1 | 110459927 | 111479124 | 1019197 | loss | external link | Pagnamenta, 2010 |
| AutCNV0000667 | 7 | 7q31.1 | 110467221 | 111479124 | 1011903 | loss | external link | Pagnamenta, 2010 |
| AutCNV0004266 | 7 | 7q31.1-q31.31 | 108413145 | 119436651 | 11023506 | loss | external link | Sanders, 2011 |
NGS de novo Mutations TopiFish (integrated Functional inference of SNVs in human) is based on gene/gene family customized models to classify missense mutations.
| Chr | Pos | Ref | Alt | Coding | AA | Validated Method | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
NGS Mosaic Mutations Top| Chr | Position | Ref | Alt | Genotype | Validated Method | Reference |
|---|---|---|---|---|---|---|
| No related data! | ||||||
NGS Other Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Low-Scale Gene Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| Sousa, 2010 |
Linkage Regions Top| Linkage Name | Band | Chr | Marker | LOD | NPL | P Value | Reference |
|---|---|---|---|---|---|---|---|
| AutLD0000058 | 7q31.1 | 7 | D7S523 | 1.02 | - | - | Liu, 2001 |