Variant Details for LAPTM5
Basic Information Top
| Gene Symbol: | LAPTM5 ( CLAST6,FLJ61683,FLJ97251,MGC125860,MGC125861 ) |
|---|---|
| Gene Full Name: | lysosomal protein transmembrane 5 |
| Band: | 1p35.2 |
| Quick Links | Entrez ID:7805; OMIM: 601476; Uniprot ID:LAPM5_HUMAN; ENSEMBL ID: ENSG00000162511; HGNC ID: 29612 |
| Relate to Another Database: | SFARIGene; denovo-db |
Variant Statistic TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default. Chromosome coordinates: hg19
| Genetic Category | CNVs/SVs | de novo Mutations | Mosaics SNVs | NGS Other Mutations | Low-Scale Gene Mutations | Linkage Regions | Total |
|---|---|---|---|---|---|---|---|
| Number | 3 | 0 | 0 | 0 | 0 | 0 | 3 |
CNVs/SVs Top| CNV ID | Chr | Band | Start | End | Size | Gain/Loss | UCSC Browser | Reference |
|---|---|---|---|---|---|---|---|---|
| AutCNV0004187 | 1 | 1p34.3-p35.2 | 31125281 | 36307897 | 5182616 | gain | external link | Sanders, 2011 |
| AutCNV0003796 | 1 | 1p35.2-p34.3 | 31125532 | 36307613 | 5182081 | gain | external link | Levy, 2011 |
| AutCNV0003454 | 1 | 1p35.2 | 31151500 | 31252206 | 100706 | gain | external link | Gai, 2011 |
NGS de novo Mutations TopiFish (integrated Functional inference of SNVs in human) is based on gene/gene family customized models to classify missense mutations.
| Chr | Pos | Ref | Alt | Coding | AA | Validated Method | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
NGS Mosaic Mutations Top| Chr | Position | Ref | Alt | Genotype | Validated Method | Reference |
|---|---|---|---|---|---|---|
| No related data! | ||||||
NGS Other Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Low-Scale Gene Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Linkage Regions Top| Linkage Name | Band | Chr | Marker | LOD | NPL | P Value | Reference |
|---|---|---|---|---|---|---|---|
| No related data! | |||||||