Variant Details for TOP3B
Basic Information Top
| Gene Symbol: | TOP3B ( FLJ39376 ) |
|---|---|
| Gene Full Name: | topoisomerase (DNA) III beta |
| Band: | 22q11.22 |
| Quick Links | Entrez ID:8940; OMIM: 603582; Uniprot ID:TOP3B_HUMAN; ENSEMBL ID: ENSG00000100038; HGNC ID: 11993 |
| Relate to Another Database: | SFARIGene; denovo-db |
Variant Statistic TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default. Chromosome coordinates: hg19
| Genetic Category | CNVs/SVs | de novo Mutations | Mosaics SNVs | NGS Other Mutations | Low-Scale Gene Mutations | Linkage Regions | Total |
|---|---|---|---|---|---|---|---|
| Number | 9 | 2 | 0 | 0 | 0 | 0 | 11 |
CNVs/SVs Top| CNV ID | Chr | Band | Start | End | Size | Gain/Loss | UCSC Browser | Reference |
|---|---|---|---|---|---|---|---|---|
| AutCNV0000269 | 22 | 22q11 | loss | Roubertie, 2001 | ||||
| AutCNV0000270 | 22 | 22q11 | loss | Niklasson, 2002 | ||||
| AutCNV0000392 | 22 | 22q11.2 | 17920000 | 25970000 | 8050000 | gain | external link | Ramelli, 2008 |
| AutCNV0000189 | 22 | 22q11.2 | 18890946 | 23222208 | 4331262 | gain | external link | Marshall, 2008 |
| AutCNV0000158 | 22 | 22q11.21 | 18890946 | 23222208 | 4331262 | gain | external link | Marshall, 2008 |
| AutCNV0004392 | 22 | 22q11.21-q11.22 | 18885500 | 23216762 | 4331262 | gain | external link | Sanders, 2011 |
| AutCNV0003441 | 22 | 22q11.22 | 22315312 | 22573637 | 258325 | loss | external link | Gai, 2011 |
| AutCNV0000723 | 22 | 22q11.21-q11.22 | 21470000 | 23070000 | 1600000 | loss | external link | Bremer, 2011 |
| AutCNV0005163 | 22 | 22q13.33 | 51123497 | 51220923 | 97426 | loss | external link | Breckpot J, 2016 |
NGS de novo Mutations TopiFish (integrated Functional inference of SNVs in human) is based on gene/gene family customized models to classify missense mutations.
| Chr | Pos | Ref | Alt | Coding | AA | Validated Method | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| 22 | 22312975 | A | G | PCR and MiSeq | deleterious | 0.8773 | Iossifov I, 2012 | ||
| 22 | 22328718 | GA | G | strong | Iossifov I, 2014 |
NGS Mosaic Mutations Top| Chr | Position | Ref | Alt | Genotype | Validated Method | Reference |
|---|---|---|---|---|---|---|
| No related data! | ||||||
NGS Other Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Low-Scale Gene Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Linkage Regions Top| Linkage Name | Band | Chr | Marker | LOD | NPL | P Value | Reference |
|---|---|---|---|---|---|---|---|
| No related data! | |||||||