Variant Details for SLC24A1
Basic Information Top
| Gene Symbol: | SLC24A1 ( HsT17412,KIAA0702,NCKX,NCKX1,RODX ) |
|---|---|
| Gene Full Name: | solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 |
| Band: | 15q22.31 |
| Quick Links | Entrez ID:9187; OMIM: 603617; Uniprot ID:NCKX1_HUMAN; ENSEMBL ID: ENSG00000074621; HGNC ID: 10975 |
| Relate to Another Database: | SFARIGene; denovo-db |
Variant Statistic TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default. Chromosome coordinates: hg19
| Genetic Category | CNVs/SVs | de novo Mutations | Mosaics SNVs | NGS Other Mutations | Low-Scale Gene Mutations | Linkage Regions | Total |
|---|---|---|---|---|---|---|---|
| Number | 4 | 2 | 0 | 0 | 0 | 0 | 6 |
CNVs/SVs Top| CNV ID | Chr | Band | Start | End | Size | Gain/Loss | UCSC Browser | Reference |
|---|---|---|---|---|---|---|---|---|
| AutCNV0000291 | 15 | 15q22-23 | 58012708 | 72612946 | 14600238 | loss | external link | Smith, 2000 |
| AutCNV0000274 | 15 | 15q22 | 58012708 | 67512946 | 9500238 | loss | external link | Wassink, 2001 |
| AutCNV0000110 | 15 | 15q21.2-26.3 | 51558408 | 102352477 | 50794069 | gain | external link | Szatmari, 2007 |
| AutCNV0000028 | 15 | 15q21.2-26.3 | 51558408 | 102352477 | 50794069 | gain | external link | Szatmari, 2007 |
NGS de novo Mutations TopiFish (integrated Functional inference of SNVs in human) is based on gene/gene family customized models to classify missense mutations.
| Chr | Pos | Ref | Alt | Coding | AA | Validated Method | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| 15 | 65918236 | C | G | Sanger sequencing | neutral | 0.4126 | De Rubeis S, 2014 | ||
| 15 | 65945118 | G | A | PCR or Sanger sequencing | deleterious | 0.9995 | Iossifov I, 2014 |
NGS Mosaic Mutations Top| Chr | Position | Ref | Alt | Genotype | Validated Method | Reference |
|---|---|---|---|---|---|---|
| No related data! | ||||||
NGS Other Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Low-Scale Gene Mutations Top| Chr | Pos | Ref | Alt | Coding | AA | Validated | iFish Prediction | iFish Probability | Reference |
|---|---|---|---|---|---|---|---|---|---|
| No related data! | |||||||||
Linkage Regions Top| Linkage Name | Band | Chr | Marker | LOD | NPL | P Value | Reference |
|---|---|---|---|---|---|---|---|
| No related data! | |||||||