Evidence Details for NUP35
Basic Information Top
| Gene Symbol: | NUP35 ( MP44,NP44,NUP53 ) |
|---|---|
| Gene Full Name: | nucleoporin 35kDa |
| Band: | 2q32.1 |
| Quick Links | Entrez ID:129401; OMIM: 608140; Uniprot ID:NUP53_HUMAN; ENSEMBL ID: ENSG00000163002; HGNC ID: 29797 |
| Relate to Another Database: | SFARIGene; denovo-db |
Sequences Top>NUP35|129401|nucleotide
ATGGCAGCCTTTGCAGTGGAACCTCAGGGGCCCGCGTTAGGATCTGAACCAATGATGCTGGGTTCACCCACATCTCCAAAGCCAGGAGTTAATGCCCAGTTCTTA
CCTGGATTTTTAATGGGGGATTTGCCAGCTCCGGTGACTCCACAACCTCGATCAATTAGTGGCCCTTCAGTAGGAGTAATGGAAATGAGATCACCTTTACTTGCA
GGTGGGTCACCACCACAACCAGTTGTACCAGCTCATAAAGATAAAAGTGGCGCTCCACCAGTTAGAAGTATATATGATGACATTTCTAGCCCAGGACTTGGATCA
ACACCTTTAACTTCAAGAAGACAGCCAAACATTTCAGTAATGCAGAGTCCTCTTGTTGGAGTTACATCTACTCCTGGAACAGGGCAAAGTATGTTTAGTCCAGCA
AGTATCGGTCAGCCACGAAAGACGACATTATCTCCTGCCCAGTTGGATCCTTTTTATACTCAAGGAGATTCTTTGACTTCAGAAGATCACCTCGATGACTCTTGG
GTGACTGTATTTGGGTTTCCTCAAGCATCTGCTTCCTACATATTACTACAATTTGCACAGTATGGGAATATCTTAAAACATGTGATGTCTAATACAGGAAATTGG
ATGCATATTCGTTATCAATCTAAACTGCAGGCTCGGAAAGCCTTAAGCAAAGATGGGAGGATTTTTGGAGAATCCATCATGATTGGTGTAAAACCATGTATTGAC
AAAAGTGTTATGGAAAGCAGTGACAGATGTGCTTTATCATCTCCATCTTTAGCCTTTACACCACCAATCAAAACTCTAGGTACACCAACACAACCTGGAAGTACT
CCTAGGATTTCTACCATGAGACCTCTTGCTACAGCATACAAAGCCTCTACTAGTGATTATCAGGTTATTTCTGACAGACAAACGCCAAAAAAAGATGAAAGTCTT
GTATCCAAAGCAATGGAGTACATGTTTGGCTGGTAG
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ATGGCAGCCTTTGCAGTGGAACCTCAGGGGCCCGCGTTAGGATCTGAACCAATGATGCTGGGTTCACCCACATCTCCAAAGCCAGGAGTTAATGCCCAGTTCTTA
CCTGGATTTTTAATGGGGGATTTGCCAGCTCCGGTGACTCCACAACCTCGATCAATTAGTGGCCCTTCAGTAGGAGTAATGGAAATGAGATCACCTTTACTTGCA
GGTGGGTCACCACCACAACCAGTTGTACCAGCTCATAAAGATAAAAGTGGCGCTCCACCAGTTAGAAGTATATATGATGACATTTCTAGCCCAGGACTTGGATCA
ACACCTTTAACTTCAAGAAGACAGCCAAACATTTCAGTAATGCAGAGTCCTCTTGTTGGAGTTACATCTACTCCTGGAACAGGGCAAAGTATGTTTAGTCCAGCA
AGTATCGGTCAGCCACGAAAGACGACATTATCTCCTGCCCAGTTGGATCCTTTTTATACTCAAGGAGATTCTTTGACTTCAGAAGATCACCTCGATGACTCTTGG
GTGACTGTATTTGGGTTTCCTCAAGCATCTGCTTCCTACATATTACTACAATTTGCACAGTATGGGAATATCTTAAAACATGTGATGTCTAATACAGGAAATTGG
ATGCATATTCGTTATCAATCTAAACTGCAGGCTCGGAAAGCCTTAAGCAAAGATGGGAGGATTTTTGGAGAATCCATCATGATTGGTGTAAAACCATGTATTGAC
AAAAGTGTTATGGAAAGCAGTGACAGATGTGCTTTATCATCTCCATCTTTAGCCTTTACACCACCAATCAAAACTCTAGGTACACCAACACAACCTGGAAGTACT
CCTAGGATTTCTACCATGAGACCTCTTGCTACAGCATACAAAGCCTCTACTAGTGATTATCAGGTTATTTCTGACAGACAAACGCCAAAAAAAGATGAAAGTCTT
GTATCCAAAGCAATGGAGTACATGTTTGGCTGGTAG
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>NUP35|129401|protein
MAAFAVEPQGPALGSEPMMLGSPTSPKPGVNAQFLPGFLMGDLPAPVTPQPRSISGPSVGVMEMRSPLLAGGSPPQPVVPAHKDKSGAPPVRSIYDDISSPGLGS
TPLTSRRQPNISVMQSPLVGVTSTPGTGQSMFSPASIGQPRKTTLSPAQLDPFYTQGDSLTSEDHLDDSWVTVFGFPQASASYILLQFAQYGNILKHVMSNTGNW
MHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKSVMESSDRCALSSPSLAFTPPIKTLGTPTQPGSTPRISTMRPLATAYKASTSDYQVISDRQTPKKDESL
VSKAMEYMFGW
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MAAFAVEPQGPALGSEPMMLGSPTSPKPGVNAQFLPGFLMGDLPAPVTPQPRSISGPSVGVMEMRSPLLAGGSPPQPVVPAHKDKSGAPPVRSIYDDISSPGLGS
TPLTSRRQPNISVMQSPLVGVTSTPGTGQSMFSPASIGQPRKTTLSPAQLDPFYTQGDSLTSEDHLDDSWVTVFGFPQASASYILLQFAQYGNILKHVMSNTGNW
MHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKSVMESSDRCALSSPSLAFTPPIKTLGTPTQPGSTPRISTMRPLATAYKASTSDYQVISDRQTPKKDESL
VSKAMEYMFGW
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Evidence summary TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
| Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Score (No. of Studies) | No | 0 (1) | 1 (2) | 1 (1) | 0 (1) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 4 (5) |
Syndromic Autism Gene TopGenome-Wide Association Studies (By Ethnic Group) Top Family Based Association Studies: 1
| Reference | Stage | Platform | #Families | Affecteds | Result | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| #Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Age (range) |
IQ (range) |
||||||
| CAUCASIAN | |||||||||||
| Hussman, 2011_1 | Discovery | Illumina Infinium Human 1 M beadship | 597 | - (-) |  |  | ASD | - - |
- - | ||
Case Control Based Association Studies: 0
| Reference | Stage | Platform | ASD Cases | Normal Controls | Result | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| #Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Age (range) |
IQ | #Subjects (% Women) |
Age (range) |
|||||
| No Evidence. | ||||||||||||
CNV Studies Top| Reference | Source | Method | ADI-R | ADOS | Diagnosis | Family | Individual | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | Simplex | Multiplex | Control | Affected | Control | Total | ||||||
| Gallagher, 2003 | - | Chromosomal analysis of G-band | | | autism | - | - | - | - | 1 | - | 1 |
| Pinto, 2010 | - | SNP microarray, qPCR | | | ASD | - | - | - | - | 996 | 1287 | 2283 |
Linkage Studies Top| Reference | Source | Method | ADI-R | ADOS | Diagnosis | Family | Individual | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | Simplex | Multiplex | Control | Affected | Control | Total | ||||||
| Buxbaum, 2001 | USA | microsatellite-based genomic screen | | | autism, PDD, Asperger syndrome | 35 | - | 35 | - | - | - | - |
Low Scale Association Studies (by Ethnic Group) Top Family Based Association Studies: 1
| Reference | Source | Platform | #Families | Affecteds | Result | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| #Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Age (range) |
IQ (range) |
|||||
| CAUCASIAN | ||||||||||
| Ramoz, 2008_1 | USA, AGRE | - | 334 | 610 (21.64%) | | | AD | - - |
- - | |
Case Control Based Association Studies: 0
| Reference | Source | Platfrom | ASD Cases | Normal Controls | Result | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| ADI-R | ADOS | Diagnosis | Age (range) |
IQ | #Subjects (% Women) |
Age (range) |
|||||
| No Evidence. | |||||||||||
Large Scale Expression Studies TopNGS de novo Mutation Studies TopNGS Mosaic SNV Studies TopNGS Other Studies Top Low Scale Gene Studies TopContact Us if you are an author of a study regarding this gene and do not find your study in this table or find errors in the representation of your study details.