AutismKB 2.0

Evidence Details for LDLRAD3


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Basic Information Top
Gene Symbol:LDLRAD3 ( - )
Gene Full Name: low density lipoprotein receptor class A domain containing 3
Band: 11p13
Quick LinksEntrez ID:143458; OMIM: NA; Uniprot ID:LRAD3_HUMAN; ENSEMBL ID: ENSG00000179241; HGNC ID: 27046
Relate to Another Database: SFARIGene; denovo-db
Sequences Top
>LDLRAD3|143458|nucleotide
ATGTGGCTGCTGGGGCCGCTGTGCCTGCTGCTGAGCAGCGCCGCGGAGAGCCAGCTGCTCCCCGGGAACAACTTCACCAATGAGTGCAACATACCAGGCAACTTC
ATGTGCAGCAATGGACGGTGCATCCCGGGCGCCTGGCAGTGTGACGGGCTGCCTGACTGCTTCGACAAGAGTGATGAGAAGGAGTGCCCCAAGGCTAAGTCGAAA
TGTGGCCCAACCTTCTTCCCCTGTGCCAGCGGCATCCATTGCATCATTGGTCGCTTCCGGTGCAATGGGTTTGAGGACTGTCCCGATGGCAGCGATGAAGAGAAC
TGCACAGCAAACCCTCTGCTTTGCTCCACCGCCCGCTACCACTGCAAGAACGGCCTCTGTATTGACAAGAGCTTCATCTGCGATGGACAGAATAACTGTCAAGAC
AACAGTGATGAGGAAAGCTGTGAAAGTTCTCAAGAACCCGGCAGTGGGCAGGTGTTTGTGACTTCAGAGAACCAACTTGTGTATTACCCCAGCATCACCTATGCC
ATCATCGGCAGCTCCGTCATTTTTGTGCTGGTGGTGGCCCTGCTGGCACTGGTCTTGCACCACCAGCGGAAGCGGAACAACCTCATGACGCTGCCCGTGCACCGG
CTGCAGCACCCTGTGCTGCTGTCCCGCCTGGTGGTCCTGGACCACCCCCACCACTGCAACGTCACCTACAACGTCAATAATGGCATCCAGTATGTGGCCAGCCAG
GCGGAGCAGAATGCGTCGGAAGTAGGCTCCCCACCCTCCTACTCCGAGGCCTTGCTGGACCAGAGGCCTGCGTGGTATGACCTTCCTCCACCGCCCTACTCTTCT
GACACGGAATCTCTGAACCAAGCCGACCTGCCCCCCTACCGCTCCCGGTCCGGGAGTGCCAACAGTGCCAGCTCCCAGGCAGCCAGCAGCCTCCTGAGCGTGGAA
GACACCAGCCACAGCCCGGGGCAGCCTGGCCCCCAGGAGGGCACTGCTGAGCCCAGGGACTCTGAGCCCAGCCAGGGCACTGAAGAAGTATAA

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>LDLRAD3|143458|protein
MWLLGPLCLLLSSAAESQLLPGNNFTNECNIPGNFMCSNGRCIPGAWQCDGLPDCFDKSDEKECPKAKSKCGPTFFPCASGIHCIIGRFRCNGFEDCPDGSDEEN
CTANPLLCSTARYHCKNGLCIDKSFICDGQNNCQDNSDEESCESSQEPGSGQVFVTSENQLVYYPSITYAIIGSSVIFVLVVALLALVLHHQRKRNNLMTLPVHR
LQHPVLLSRLVVLDHPHHCNVTYNVNNGIQYVASQAEQNASEVGSPPSYSEALLDQRPAWYDLPPPPYSSDTESLNQADLPPYRSRSGSANSASSQAASSLLSVE
DTSHSPGQPGPQEGTAEPRDSEPSQGTEEV

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Evidence summary Top

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Evidences Syndromic Gene GWAS CNV Linkage Association Expression NGS de novo NGS Mosaic NGS Other Low-Scale Gene Studies Total
Score (No. of Studies) No 0 (0) 0 (0) 1 (1) 0 (1) 0 (0) 0 (0) 0 (0) 0 (1) 0 (0) 2 (3)
Syndromic Autism Gene Top
Genome-Wide Association Studies(By Ethnic Group) Top
CNV Studies Top
Linkage Studies Top
Reference Source Method ADI-R ADOS Diagnosis Family Individual
Total Simplex Multiplex Control Affected Control Total
Yonan, 2003 USA microsatellite-based genomic screenPDD 345 - 345 - - - -
Low Scale Association Studies (by Ethnic Group) Top
Family Based Association Studies: 0
Case Control Based Association Studies: 1
Reference Source Platfrom ASD Cases Normal Controls Result
ADI-R ADOS Diagnosis Age
(range)
IQ #Subjects
(% Women)
Age
(range)
CAUCASIAN
Kantojarvi, 2010_1 Finland -ASD -
-
- 216
(50.00%)
50
-
Large Scale Expression Studies Top
NGS de novo Mutation Studies Top
NGS Mosaic SNV Studies Top
NGS Other Studies Top
Reference Source Platform ADI-R ADOS Diagnosis Family Affected Validation Method
Total Simplex Multiplex
Cukier HN, 2014 - Illumina HiSeq 2000ASD 40 - - 100 HumanExome BeadChip or Sanger sequencing
Low Scale Gene Studies Top

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Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018