AutismKB 2.0

Evidence Details for NLRP4


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Basic Information Top
Gene Symbol:NLRP4 ( CLR19.5,CT58,FLJ32126,NALP4,PAN2,PYPAF4,RNH2 )
Gene Full Name: NLR family, pyrin domain containing 4
Band: 19q13.43
Quick LinksEntrez ID:147945; OMIM: 609645; Uniprot ID:NALP4_HUMAN; ENSEMBL ID: ENSG00000160505; HGNC ID: 22943
Relate to Another Database: SFARIGene; denovo-db
Sequences Top
>NLRP4|147945|nucleotide
ATGGCAGCCTCTTTCTTCTCTGATTTTGGTCTTATGTGGTATCTGGAGGAGCTCAAAAAGGAGGAGTTCAGGAAATTTAAAGAACATCTCAAGCAAATGACTTTG
CAGCTTGAACTCAAGCAGATTCCCTGGACTGAGGTCAAAAAAGCATCCCGGGAAGAACTTGCAAACCTCTTGATCAAGCACTATGAAGAACAACAAGCTTGGAAC
ATAACCTTAAGAATCTTTCAAAAGATGGATAGAAAGGATCTCTGCATGAAGGTCATGAGGGAGAGAACAGGATACACAAAGACCTATCAAGCTCACGCAAAGCAG
AAATTCAGCCGCTTATGGTCCAGCAAGTCTGTCACTGAGATTCACCTATACTTTGAGGAGGAAGTCAAGCAAGAAGAATGTGACCATTTGGACCGCCTTTTTGCT
CCCAAGGAAGCTGGGAAACAGCCACGTACAGTGATCATTCAAGGACCACAAGGAATTGGAAAAACGACACTCCTGATGAAGCTGATGATGGCCTGGTCGGACAAC
AAGATCTTTCGGGATAGGTTCCTGTACACGTTCTATTTCTGCTGCAGAGAACTGAGGGAGTTGCCGCCAACGAGTTTGGCTGACTTGATTTCCAGAGAGTGGCCT
GACCCCGCTGCTCCTATAACAGAGATCGTGTCTCAACCGGAGAGACTCTTGTTCGTCATCGACAGCTTCGAAGAGCTGCAGGGCGGCTTGAACGAACCCGATTCG
GATCTGTGTGGTGACTTGATGGAGAAACGGCCGGTGCAGGTGCTTCTGAGCAGTTTGCTGAGGAAGAAGATGCTCCCGGAGGCCTCCCTGCTCATCGCTATCAAA
CCCGTGTGCCCGAAGGAGCTCCGGGATCAGGTGACGATCTCAGAAATCTACCAGCCCCGGGGATTCAACGAGAGTGATAGGTTAGTGTATTTCTGCTGTTTCTTC
AAAGACCCGAAAAGAGCCATGGAAGCCTTCAATCTTGTAAGAGAAAGTGAACAGCTGTTTTCCATATGCCAAATCCCGCTCCTCTGCTGGATCCTGTGTACCAGT
CTGAAGCAAGAGATGCAGAAAGGAAAAGACCTGGCCCTGACCTGCCAGAGCACTACCTCTGTGTACTCCTCTTTCGTCTTTAACCTGTTCACACCTGAGGGTGCC
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>NLRP4|147945|protein
MAASFFSDFGLMWYLEELKKEEFRKFKEHLKQMTLQLELKQIPWTEVKKASREELANLLIKHYEEQQAWNITLRIFQKMDRKDLCMKVMRERTGYTKTYQAHAKQ
KFSRLWSSKSVTEIHLYFEEEVKQEECDHLDRLFAPKEAGKQPRTVIIQGPQGIGKTTLLMKLMMAWSDNKIFRDRFLYTFYFCCRELRELPPTSLADLISREWP
DPAAPITEIVSQPERLLFVIDSFEELQGGLNEPDSDLCGDLMEKRPVQVLLSSLLRKKMLPEASLLIAIKPVCPKELRDQVTISEIYQPRGFNESDRLVYFCCFF
KDPKRAMEAFNLVRESEQLFSICQIPLLCWILCTSLKQEMQKGKDLALTCQSTTSVYSSFVFNLFTPEGAEGPTPQTQHQLKALCSLAAEGMWTDTFEFCEDDLR
RNGVVDADIPALLGTKILLKYGERESSYVFLHVCIQEFCAALFYLLKSHLDHPHPAVRCVQELLVANFEKARRAHWIFLGCFLTGLLNKKEQEKLDAFFGFQLSQ
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Evidence summary Top

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Evidences Syndromic Gene GWAS CNV Linkage Association Expression NGS de novo NGS Mosaic NGS Other Low-Scale Gene Studies Total
Score (No. of Studies) No 0 (0) 1 (3) 1 (1) 0 (0) 0 (0) 0 (1) 0 (0) 0 (0) 0 (0) 4 (5)
Syndromic Autism Gene Top
Genome-Wide Association Studies(By Ethnic Group) Top
CNV Studies Top
Reference Source Method ADI-R ADOS Diagnosis Family Individual
Total Simplex Multiplex Control Affected Control Total
Zwaag, 2009 - SNP microarrayautism - - - - 105 267 372
Pinto, 2010 - SNP microarray, qPCRASD - - - - 996 1287 2283
Levy, 2011 Simons Simplex Collection aCGH--ASD 915 915 - - - - -
Linkage Studies Top