AutismKB 2.0

Evidence Details for GLIS1


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Basic Information Top
Gene Symbol:GLIS1 ( FLJ36155 )
Gene Full Name: GLIS family zinc finger 1
Band: 1p32.3
Quick LinksEntrez ID:148979; OMIM: 610378; Uniprot ID:GLIS1_HUMAN; ENSEMBL ID: ENSG00000174332; HGNC ID: 29525
Relate to Another Database: SFARIGene; denovo-db
Sequences Top
>GLIS1|148979|nucleotide
ATGGCAGAGGCCCGCACATCCCTGTCTGCCCACTGTCGGGGCCCGCTGGCCACTGGCCTGCACCCAGACCTGGACCTCCCGGGCCGAAGCCTCGCCACCCCTGCG
CCTTCCTGCTACCTTCTGGGCAGCGAACCCAGCTCTGGCCTGGGCCTCCAGCCCGAGACCCACCTCCCCGAGGGCAGCCTGAAGCGGTGCTGCGTCTTGGGCCTA
CCCCCCACCTCCCCAGCCTCCTCCTCACCCTGTGCCTCCTCCGACGTCACCTCCATCATCCGCTCCTCCCAGACGTCTCTGGTCACCTGTGTAAATGGACTCCGG
AGCCCCCCTCTGACGGGAGATCTGGGGGGCCCTTCCAAGCGGGCCCGGCCTGGCCCTGCATCGACGGACAGCCATGAGGGCAGCTTGCAACTTGAAGCCTGCCGG
AAGGCGAGCTTCCTGAAGCAGGAACCCGCGGATGAGTTTTCAGAGCTCTTTGGGCCTCACCAGCAGGGCCTGCCGCCCCCCTATCCCCTGTCTCAGTTGCCGCCT
GGCCCAAGCCTTGGAGGCCTGGGGCTGGGCCTGGCAGGCAGGGTGGTGGCCGGGCGGCAGGCGTGCCGCTGGGTGGACTGCTGTGCAGCCTATGAGCAGCAGGAG
GAGCTGGTGCGGCACATCGAGAAGAGCCACATCGACCAGCGCAAGGGCGAGGACTTCACCTGCTTCTGGGCTGGCTGCGTGCGCCGCTACAAGCCCTTCAACGCC
CGCTACAAGCTGCTCATCCACATGCGAGTGCACTCGGGCGAGAAGCCCAACAAGTGCATGTTTGAAGGCTGCAGCAAGGCCTTCTCACGGCTGGAGAACCTCAAG
ATCCACCTGAGGAGCCACACGGGCGAGAAGCCGTACCTGTGCCAGCACCCGGGTTGCCAGAAGGCCTTCAGCAACTCCAGCGACCGCGCCAAGCACCAGCGCACC
CACCTAGACACGAAGCCGTACGCCTGTCAGATCCCTGGCTGCTCCAAGCGCTACACAGACCCCAGCTCCCTCCGCAAGCACGTCAAGGCCCATTCAGCCAAAGAG
CAGCAGGTGCGTAAGAAGCTGCATGCGGGCCCTGACACCGAGGCCGACGTCCTGACCGAGTGTCTGGTCCTGCAGCAGCTCCACACGTCCACACAGCTGGCTGCC
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>GLIS1|148979|protein
MAEARTSLSAHCRGPLATGLHPDLDLPGRSLATPAPSCYLLGSEPSSGLGLQPETHLPEGSLKRCCVLGLPPTSPASSSPCASSDVTSIIRSSQTSLVTCVNGLR
SPPLTGDLGGPSKRARPGPASTDSHEGSLQLEACRKASFLKQEPADEFSELFGPHQQGLPPPYPLSQLPPGPSLGGLGLGLAGRVVAGRQACRWVDCCAAYEQQE
ELVRHIEKSHIDQRKGEDFTCFWAGCVRRYKPFNARYKLLIHMRVHSGEKPNKCMFEGCSKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRT
HLDTKPYACQIPGCSKRYTDPSSLRKHVKAHSAKEQQVRKKLHAGPDTEADVLTECLVLQQLHTSTQLAASDGKGGCGLGQELLPGVYPGSITPHNGLASGLLPP
AHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGLGPPPLPPSSQSHSPGGQPFPTLPSKPSYPPFQSPPPPPLPSPQGYQGSFHSIQSCF
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Evidence summary Top

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Evidences Syndromic Gene GWAS CNV Linkage Association Expression NGS de novo NGS Mosaic NGS Other Low-Scale Gene Studies Total
Score (No. of Studies) No 1 (1) 1 (1) 0 (0) 0 (0) 0 (0) 0 (1) 0 (0) 0 (0) 0 (0) 6 (3)
Syndromic Autism Gene Top
Genome-Wide Association Studies (By Ethnic Group) Top
Family Based Association Studies: 0
Reference Stage Platform #Families Affecteds Result
#Subjects
(% Women)
ADI-R ADOS Diagnosis Age
(range)
IQ
(range)
No Evidence.
Case Control Based Association Studies: 1
Reference Stage Platform ASD Cases Normal Controls Result
#Subjects
(% Women)
ADI-R ADOS Diagnosis Age
(range)
IQ #Subjects
(% Women)
Age
(range)
MIXED/OTHERS
Kuo PH, 2015_1 Discovery Affymetrix SNP array 6.0 597
(-)
ASD -
-
- 1595
(-)
-
-
CNV Studies Top
Reference Source Method ADI-R ADOS Diagnosis Family Individual
Total Simplex Multiplex Control Affected Control Total
Zwaag, 2009 - SNP microarrayautism - - - - 105 267 372
Linkage Studies Top