Evidence Details for C9orf163
Basic Information Top
| Gene Symbol: | C9orf163 ( FLJ36779,RP11-413M3.11 ) |
|---|---|
| Gene Full Name: | chromosome 9 open reading frame 163 |
| Band: | 9q34.3 |
| Quick Links | Entrez ID:158055; OMIM: NA; Uniprot ID:CI163_HUMAN; ENSEMBL ID: ENSG00000196366; HGNC ID: 26718 |
| Relate to Another Database: | SFARIGene; denovo-db |
Sequences Top>C9orf163|158055|nucleotide
ATGCCGGGCCCACTCACCTGCACACCTGCCTGGCAAGGGCAGGGAAGAGCCGCGGCCTTCCTCTGCTGCTCCTTCCAGAGGGCAGGCGCCGTGGTGGGGGTGCCC
GCCCGATGGCATCGCGGGAGGCTGAGCTCCCAGCAGCGGCTGAGGTCCTCCCTGGGTGGGAGCCACCCTTGTCCCCAGCTGGGCCGGCGGCTGGTGAGGGAGGGG
GTGATATCCGTGCCACGCCAGCAGGGCCGCAGGCGGTGCAGGGAGAGCTTCAGTCCGGCTGACGTGGCACCAGGGCCAATCTGCTCAGCTAACATTTGCCTTTCA
GGAGTCAGATTCCTGACCTGTTTGAACAGAGTTAGGGAGCACGTGGTAGGGCCCAGCCCCAGCCCCGCTGCCCCCATCTGCTTCTTCCCAGTGGTCGAGGCGCTC
TGCACCCTCCGCGGAAGGAGGTGTCATTGTTTGCCCTTTCCAAAGAGGGGGATGCAGAGGTGGATGCTGCCTCTCAGGCGTGGGGCTCGCCTTTTGCCGCTCGCG
AGTTCAAAGAACCCAAGAGCCAGGAGCCCAGGGCTCGACCCTCTAGGGTCCTCCGAAACCCTGTGGTCCCACCGGGGTGGGCACTAA
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ATGCCGGGCCCACTCACCTGCACACCTGCCTGGCAAGGGCAGGGAAGAGCCGCGGCCTTCCTCTGCTGCTCCTTCCAGAGGGCAGGCGCCGTGGTGGGGGTGCCC
GCCCGATGGCATCGCGGGAGGCTGAGCTCCCAGCAGCGGCTGAGGTCCTCCCTGGGTGGGAGCCACCCTTGTCCCCAGCTGGGCCGGCGGCTGGTGAGGGAGGGG
GTGATATCCGTGCCACGCCAGCAGGGCCGCAGGCGGTGCAGGGAGAGCTTCAGTCCGGCTGACGTGGCACCAGGGCCAATCTGCTCAGCTAACATTTGCCTTTCA
GGAGTCAGATTCCTGACCTGTTTGAACAGAGTTAGGGAGCACGTGGTAGGGCCCAGCCCCAGCCCCGCTGCCCCCATCTGCTTCTTCCCAGTGGTCGAGGCGCTC
TGCACCCTCCGCGGAAGGAGGTGTCATTGTTTGCCCTTTCCAAAGAGGGGGATGCAGAGGTGGATGCTGCCTCTCAGGCGTGGGGCTCGCCTTTTGCCGCTCGCG
AGTTCAAAGAACCCAAGAGCCAGGAGCCCAGGGCTCGACCCTCTAGGGTCCTCCGAAACCCTGTGGTCCCACCGGGGTGGGCACTAA
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>C9orf163|158055|protein
MPGPLTCTPAWQGQGRAAAFLCCSFQRAGAVVGVPARWHRGRLSSQQRLRSSLGGSHPCPQLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPICSANICLS
GVRFLTCLNRVREHVVGPSPSPAAPICFFPVVEALCTLRGRRCHCLPFPKRGMQRWMLPLRRGARLLPLASSKNPRARSPGLDPLGSSETLWSHRGGH
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MPGPLTCTPAWQGQGRAAAFLCCSFQRAGAVVGVPARWHRGRLSSQQRLRSSLGGSHPCPQLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPICSANICLS
GVRFLTCLNRVREHVVGPSPSPAAPICFFPVVEALCTLRGRRCHCLPFPKRGMQRWMLPLRRGARLLPLASSKNPRARSPGLDPLGSSETLWSHRGGH
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Evidence summary TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
| Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Score (No. of Studies) | No | 0 (0) | 0 (2) | 1 (3) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 2 (5) |
Syndromic Autism Gene TopGenome-Wide Association Studies(By Ethnic Group) TopCNV Studies Top| Reference | Source | Method | ADI-R | ADOS | Diagnosis | Family | Individual | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | Simplex | Multiplex | Control | Affected | Control | Total | ||||||
| Gregory, 2009 | USA | aCGH |  |  | ASD | - | - | - | - | 119 | 54 | 173 |
| Pinto, 2010 | - | SNP microarray, qPCR | | | ASD | - | - | - | - | 996 | 1287 | 2283 |
Linkage Studies Top| Reference | Source | Method | ADI-R | ADOS | Diagnosis | Family | Individual | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | Simplex | Multiplex | Control | Affected | Control | Total | ||||||
| Monaco, 2001 | - | microsatellite-based genomic screen | | | PDD | 152 | - | 152 | - | - | - | - |
| Buxbaum, 2001 | USA | microsatellite-based genomic screen | | | autism, PDD, Asperger syndrome | 35 | - | 35 | - | - | - | - |
| Lamb, 2005 | - | microsatellite-based genomic screen | | | autism | 207 | - | 207 | - | 420 | - | - |
Low Scale Association Studies (by Ethnic Group) TopLarge Scale Expression Studies TopNGS de novo Mutation Studies TopNGS Mosaic SNV Studies TopNGS Other Studies Top Low Scale Gene Studies TopContact Us if you are an author of a study regarding this gene and do not find your study in this table or find errors in the representation of your study details.