Evidence Details for COL22A1

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Basic Information Top

Gene Symbol:	COL22A1 ( - )
Gene Full Name:	collagen, type XXII, alpha 1
Band:	8q24.23-q24.3
Quick Links	Entrez ID:169044; OMIM: 610026; Uniprot ID:COMA1_HUMAN; ENSEMBL ID: ENSG00000169436; HGNC ID: 22989
Relate to Another Database:	SFARIGene; denovo-db

Sequences Top

Nucleotide Sequence
Protein Sequence

>COL22A1|169044|nucleotide
ATGGCCGGCCTCCGAGGGAACGCTGTGGCTGGCCTCCTCTGGATGCTGCTGCTGTGGAGTGGGGGCGGCGGCTGCCAGGCTCAGCGGGCAGGTTGCAAAAGTGTC
CACTACGATCTGGTCTTCCTCCTGGACACCTCCTCCAGCGTGGGCAAGGAGGACTTTGAGAAGGTCCGGCAGTGGGTGGCCAACCTGGTGGACACCTTCGAGGTG
GGCCCCGACCGCACCCGTGTGGGGGTCGTGCGCTACAGCGACCGGCCCACCACGGCCTTCGAGTTGGGACTCTTTGGCTCGCAGGAGGAGGTCAAGGCGGCTGCC
CGGCGTCTCGCCTACCACGGGGGCAACACCAACACGGGAGACGCGCTCCGCTACATCACGGCCCGCAGCTTCTCCCCACACGCCGGCGGCCGCCCCAGGGACCGC
GCCTACAAGCAGGTGGCCATCCTGCTCACCGACGGCCGCAGCCAGGACCTGGTGCTGGACGCCGCGGCGGCAGCCCACCGCGCTGGCATCCGCATCTTTGCCGTG
GGCGTGGGCGAGGCACTCAAGGAGGAGCTGGAGGAGATCGCCTCAGAGCCCAAGTCCGCCCACGTCTTCCACGTGTCCGACTTCAATGCCATCGACAAGATCCGG
GGCAAGCTGCGGCGCCGTCTTTGTGAAAATGTGCTCTGTCCTAGCGTTCGTGTAGAAGGAGATCGCTTTAAGCACACCAATGGAGGAACCAAGGAAATCACAGGT
TTTGACCTGATGGATTTGTTCAGTGTGAAGGAAATCTTGGGGAAGAGAGAGAATGGAGCTCAGAGTTCCTATGTACGGATGGGATCCTTCCCTGTGGTGCAAAGT
ACTGAGGATGTGTTCCCCCAAGGTTTACCTGATGAGTACGCCTTTGTCACAACCTTCCGGTTCAGGAAAACCTCTCGGAAGGAAGACTGGTATATCTGGCAGGTC
ATCGACCAGTACAGCATCCCACAGGTCTCCATCCGGCTGGATGGTGAAAACAAGGCAGTCGAGTACAACGCTGTGGGTGCCATGAAAGATGCTGTCAGGGTGGTC
TTCCGAGGTTCTCGGGTCAATGACCTCTTTGACCGGGACTGGCACAAGATGGCCCTGAGCATCCAGGCCCAGAACGTCTCCCTGCACATTGACTGTGCGCTGGTG
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>COL22A1|169044|protein
MAGLRGNAVAGLLWMLLLWSGGGGCQAQRAGCKSVHYDLVFLLDTSSSVGKEDFEKVRQWVANLVDTFEVGPDRTRVGVVRYSDRPTTAFELGLFGSQEEVKAAA
RRLAYHGGNTNTGDALRYITARSFSPHAGGRPRDRAYKQVAILLTDGRSQDLVLDAAAAAHRAGIRIFAVGVGEALKEELEEIASEPKSAHVFHVSDFNAIDKIR
GKLRRRLCENVLCPSVRVEGDRFKHTNGGTKEITGFDLMDLFSVKEILGKRENGAQSSYVRMGSFPVVQSTEDVFPQGLPDEYAFVTTFRFRKTSRKEDWYIWQV
IDQYSIPQVSIRLDGENKAVEYNAVGAMKDAVRVVFRGSRVNDLFDRDWHKMALSIQAQNVSLHIDCALVQTLPIEERENIDIQGKTVIGKRLYDSVPIDFDLQR
IVIYCDSRHAELETCCDIPSGPCQVTVVTEPPPPPPPQRPPTPGSEQIGFLKTINCSCPAGEKGEMGVAGPMGLPGPKGDIGAIGPVGAPGPKGEKGDVGIGPFG
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Evidence summary Top

Click the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.

Evidences	Syndromic Gene	GWAS	CNV	Linkage	Association	Expression	NGS de novo	NGS Mosaic	NGS Other	Low-Scale Gene Studies	Total
Score (No. of Studies)	No	0 (1)	1 (2)	0 (0)	0 (0)	0 (0)	0 (0)	0 (1)	0 (1)	0 (0)	2 (5)

Syndromic Autism Gene Top

Genome-Wide Association Studies (By Ethnic Group) Top

Family Based Association Studies: 1

Reference	Stage	Platform	#Families	Affecteds						Result
Reference	Stage	Platform	#Families	#Subjects (% Women)	ADI-R	ADOS	Diagnosis	Age (range)	IQ (range)	Result
CAUCASIAN
Hussman, 2011_1	Discovery	Illumina Infinium Human 1 M beadship	597	- (-)			ASD	- -	- -

Case Control Based Association Studies: 0

Reference	Stage	Platform	ASD Cases						Normal Controls		Result
Reference	Stage	Platform	#Subjects (% Women)	ADI-R	ADOS	Diagnosis	Age (range)	IQ	#Subjects (% Women)	Age (range)	Result
No Evidence.

CNV Studies Top

Reference	Source	Method	ADI-R	ADOS	Diagnosis	Family				Individual
Reference	Source	Method	ADI-R	ADOS	Diagnosis	Total	Simplex	Multiplex	Control	Affected	Control	Total
Yu, 2002	USA	STS mapping			PDD	105	-	105	-	-	668	668
Szatmari, 2007	Europe, North America	SNP microarray			ASD	1491	-	-	-	-	-	0

Linkage Studies Top

AutismKB 2.0

Evidence Details for COL22A1