AutismKB 2.0

Evidence Details for SEPT1


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Basic Information Top
Gene Symbol:SEPT1 ( DIFF6,LARP,MGC20394,PNUTL3,SEP1 )
Gene Full Name: septin 1
Band: 16p11.2
Quick LinksEntrez ID:1731; OMIM: 612897; Uniprot ID:SEPT1_HUMAN; ENSEMBL ID: ENSG00000180096; HGNC ID: 2879
Relate to Another Database: SFARIGene; denovo-db
Sequences Top
>SEPT1|1731|nucleotide
ATGGACAAGGAGTACGTGGGTTTTGCTGCCCTCCCCAACCAGCTGCACCGCAAGTCTGTCAAGAAGGGGTTTGACTTCACGCTAATGGTGGCAGGGGAGTCAGGC
CTAGGGAAATCCACCCTCATCAACAGCCTCTTCCTCACCAACCTCTATGAGGATCGCCAGGTGCCAGAGGCCAGTGCTCGCTTGACACAGACCCTGGCCATTGAG
CGCCGGGGCGTAGAGATTGAGGAAGGGGGTGTGAAAGTGAAGCTGACCCTTGTGGACACACCTGGCTTTGGGGACTCAGTGGACTGCTCTGACTGCTGGCTTCCG
GTGGTGAAATTCATCGAGGAGCAATTTGAGCAGTACCTTAGGGATGAGAGTGGCCTGAACCGGAAGAACATCCAGGACTCCCGAGTCCACTGCTGCCTCTACTTC
ATCTCACCCTTCGGCCGGGGGCTCCGGCCCCTAGATGTGGCCTTCCTCCGGGCAGTACACGAGAAAGTCAACATCATCCCAGTCATTGGCAAAGCGGATGCTCTG
ATGCCCCAGGAAACCCAGGCCCTCAAGCAGAAGATCCGGGATCAGTTGAAGGAAGAGGAGATCCACATCTACCAGTTCCCCGAATGTGACTCTGATGAAGATGAA
GACTTCAAGAGGCAGGATGCAGAGATGAAGGAAAGCATCCCTTTTGCAGTCGTGGGATCATGCGAGGTGGTGAGGGATGGCGGGAACCGGCCGGTGAGGGGACGC
CGCTACTCCTGGGGGACCGTGGAGGTGGAGAACCCACATCACTGCGATTTCCTGAACCTGCGACGGATGCTGGTGCAGACACACCTGCAGGACCTGAAAGAGGTG
ACGCACGATCTGCTCTACGAGGGCTACCGGGCCCGCTGCCTACAGAGCCTGGCCCGGCCTGGGGCTCGCGATCGAGCCAGCCGCAGTAAGCTTTCCCGCCAGAGC
GCCACAGAGATCCCGCTGCCCATGCTGCCTCTGGCGGACACCGAGAAGCTGATCCGCGAGAAAGACGAAGAGCTGCGCCGCATGCAAGAGATGCTGGAGAAGATG
CAGGCCCAAATGCAGCAGAGCCAGGCCCAGGGCGAGCAGTCAGACGCCCTCTGA
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>SEPT1|1731|protein
MDKEYVGFAALPNQLHRKSVKKGFDFTLMVAGESGLGKSTLINSLFLTNLYEDRQVPEASARLTQTLAIERRGVEIEEGGVKVKLTLVDTPGFGDSVDCSDCWLP
VVKFIEEQFEQYLRDESGLNRKNIQDSRVHCCLYFISPFGRGLRPLDVAFLRAVHEKVNIIPVIGKADALMPQETQALKQKIRDQLKEEEIHIYQFPECDSDEDE
DFKRQDAEMKESIPFAVVGSCEVVRDGGNRPVRGRRYSWGTVEVENPHHCDFLNLRRMLVQTHLQDLKEVTHDLLYEGYRARCLQSLARPGARDRASRSKLSRQS
ATEIPLPMLPLADTEKLIREKDEELRRMQEMLEKMQAQMQQSQAQGEQSDAL

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Evidence summary Top

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Evidences Syndromic Gene GWAS CNV Linkage Association Expression NGS de novo NGS Mosaic NGS Other Low-Scale Gene Studies Total
Score (No. of Studies) No 0 (0) 2 (5) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 4 (5)
Syndromic Autism Gene Top
Genome-Wide Association Studies(By Ethnic Group) Top
CNV Studies Top
Reference Source Method ADI-R ADOS Diagnosis Family Individual
Total Simplex Multiplex Control Affected Control Total
Finelli, 2004 - FISHautistic feature - - - - 2 - 2
Marshall, 2008 - SNP microarrayASD 427 238 189 - 427 500 927
Weiss, 2008 USA, Ireland aCGH, SNP microarrayASD 751 - - - 2252 23502 25754
Zwaag, 2009 - SNP microarrayautism - - - - 105 267 372
Gai, 2011 AGRE SNP microarray--autism - - - - 1224 3801 5025
Linkage Studies Top