Evidence Details for TNRC6A


Gene Symbol: | TNRC6A ( CAGH26,DKFZp666E117,FLJ22043,GW1,GW182,KIAA1460,MGC75384,TNRC6 ) |
---|---|
Gene Full Name: | trinucleotide repeat containing 6A |
Band: | 16p12.1 |
Quick Links | Entrez ID:27327; OMIM: 610739; Uniprot ID:TNR6A_HUMAN; ENSEMBL ID: ENSG00000090905; HGNC ID: 11969 |
Relate to Another Database: | SFARIGene; denovo-db |


>TNRC6A|27327|nucleotide
ATGAGAGAATTGGAAGCTAAAGCTACCAAAGACGTAGAAAGAAATCTTAGCAGGGATTTAGTGCAAGAAGAAGAACAGTTGATGGAAGAAAAGAAAAAGAAAAAA
GACGACAAGAAAAAGAAGGAAGCTGCTCAAAAGAAGGCCACTGAACAAAAAATCAAAGTGCCAGAACAGATAAAGCCCAGTGTAAGCCAGCCTCAGCCTGCCAAC
TCTAATAACGGCACTTCCACAGCAACCAGCACTAATAATAATGCCAAGCGAGCTACAGCCAACAATCAGCAGCCACAGCAGCAGCAGCAACAGCAGCAGCCGCAG
CAGCAGCAGCCACAGCAGCAGCCACAGCCGCAGCCGCAGCAGCAGCAGCCACAGCAGCAGCCACAGGCCTTGCCTCGGTATCCTCGTGAAGTACCTCCACGATTT
CGCCACCAGGAACACAAACAGCTTCTAAAGAGGGGTCAGCATTTTCCTGTTATAGCAGCAAACCTTGGATCTGCTGTTAAGGTGTTAAACAGCCAGTCAGAAAGC
AGTGCTTTAACAAATCAACAGCCACAAAATAACGGAGAGGTGCAGAACAGCAAAAACCAGTCAGATATAAACCACAGTACTTCAGGATCCCATTATGAAAATTCC
CAGCGGGGACCTGTGTCTTCTACAAGTGATTCTAGCACAAACTGTAAGAATGCTGTTGTAAGTGACTTGTCGGAAAAAGAAGCATGGCCCTCAGCCCCTGGCAGT
GATCCGGAGTTGGCTTCAGAATGTATGGATGCTGATTCTGCCTCCAGTTCTGAATCAGAGAGAAACATCACTATCATGGCTTCAGGGAACACAGGTGGTGAAAAA
GATGGCCTTCGGAATAGCACTGGACTTGGTTCCCAAAACAAGTTTGTAGTTGGTAGCAGCAGCAATAATGTGGGCCATGGAAGTAGTACTGGGCCATGGGGTTTT
TCCCATGGAGCCATAATAAGCACATGTCAGGTCTCTGTGGATGCTCCTGAAAGCAAATCTGAAAGTAGCAACAATAGAATGAATGCTTGGGGCACTGTAAGTTCT
TCATCAAATGGAGGGTTAAATCCAAGCACTTTGAATTCAGCTAGCAACCATGGTGCCTGGCCAGTATTAGAGAACAATGGACTTGCCCTAAAAGGGCCTGTAGGG
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ATGAGAGAATTGGAAGCTAAAGCTACCAAAGACGTAGAAAGAAATCTTAGCAGGGATTTAGTGCAAGAAGAAGAACAGTTGATGGAAGAAAAGAAAAAGAAAAAA
GACGACAAGAAAAAGAAGGAAGCTGCTCAAAAGAAGGCCACTGAACAAAAAATCAAAGTGCCAGAACAGATAAAGCCCAGTGTAAGCCAGCCTCAGCCTGCCAAC
TCTAATAACGGCACTTCCACAGCAACCAGCACTAATAATAATGCCAAGCGAGCTACAGCCAACAATCAGCAGCCACAGCAGCAGCAGCAACAGCAGCAGCCGCAG
CAGCAGCAGCCACAGCAGCAGCCACAGCCGCAGCCGCAGCAGCAGCAGCCACAGCAGCAGCCACAGGCCTTGCCTCGGTATCCTCGTGAAGTACCTCCACGATTT
CGCCACCAGGAACACAAACAGCTTCTAAAGAGGGGTCAGCATTTTCCTGTTATAGCAGCAAACCTTGGATCTGCTGTTAAGGTGTTAAACAGCCAGTCAGAAAGC
AGTGCTTTAACAAATCAACAGCCACAAAATAACGGAGAGGTGCAGAACAGCAAAAACCAGTCAGATATAAACCACAGTACTTCAGGATCCCATTATGAAAATTCC
CAGCGGGGACCTGTGTCTTCTACAAGTGATTCTAGCACAAACTGTAAGAATGCTGTTGTAAGTGACTTGTCGGAAAAAGAAGCATGGCCCTCAGCCCCTGGCAGT
GATCCGGAGTTGGCTTCAGAATGTATGGATGCTGATTCTGCCTCCAGTTCTGAATCAGAGAGAAACATCACTATCATGGCTTCAGGGAACACAGGTGGTGAAAAA
GATGGCCTTCGGAATAGCACTGGACTTGGTTCCCAAAACAAGTTTGTAGTTGGTAGCAGCAGCAATAATGTGGGCCATGGAAGTAGTACTGGGCCATGGGGTTTT
TCCCATGGAGCCATAATAAGCACATGTCAGGTCTCTGTGGATGCTCCTGAAAGCAAATCTGAAAGTAGCAACAATAGAATGAATGCTTGGGGCACTGTAAGTTCT
TCATCAAATGGAGGGTTAAATCCAAGCACTTTGAATTCAGCTAGCAACCATGGTGCCTGGCCAGTATTAGAGAACAATGGACTTGCCCTAAAAGGGCCTGTAGGG
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>TNRC6A|27327|protein
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIKPSVSQPQPANSNNGTSTATSTNNNAKRATANNQQPQQQQQQQQPQ
QQQPQQQPQPQPQQQQPQQQPQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLNSQSESSALTNQQPQNNGEVQNSKNQSDINHSTSGSHYENS
QRGPVSSTSDSSTNCKNAVVSDLSEKEAWPSAPGSDPELASECMDADSASSSESERNITIMASGNTGGEKDGLRNSTGLGSQNKFVVGSSSNNVGHGSSTGPWGF
SHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGAWPVLENNGLALKGPVGSGSSGINIQCSTIGQMPNNQSINSKVSGGSTHGTW
GSLQETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPSSNTGAWRVSTMNHPQMQAPSGMNGTSLSHLSNGESKSGGSYGTTWGAY
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MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIKPSVSQPQPANSNNGTSTATSTNNNAKRATANNQQPQQQQQQQQPQ
QQQPQQQPQPQPQQQQPQQQPQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLNSQSESSALTNQQPQNNGEVQNSKNQSDINHSTSGSHYENS
QRGPVSSTSDSSTNCKNAVVSDLSEKEAWPSAPGSDPELASECMDADSASSSESERNITIMASGNTGGEKDGLRNSTGLGSQNKFVVGSSSNNVGHGSSTGPWGF
SHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGAWPVLENNGLALKGPVGSGSSGINIQCSTIGQMPNNQSINSKVSGGSTHGTW
GSLQETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPSSNTGAWRVSTMNHPQMQAPSGMNGTSLSHLSNGESKSGGSYGTTWGAY
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Click the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
---|---|---|---|---|---|---|---|---|---|---|---|
Score (No. of Studies) | No | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 1 (1) | 2 (2) | 0 (0) | 0 (1) | 0 (0) | 21 (4) |












Microarray Studies: 1
Reference | Source | Tissue | #Subjects (% Women) |
ADI-R | ADOS | Endo- pheno | Diagnosis | Normal Controls (% Women) |
Fold Change | Up/ Down | P/Q value | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Voineagu, 2011_1 | Unknown | 16 frontal cortex(BA9) and 13 temporal cortex(BA41 | 16 (25.00%) | ![]() | ![]() | - | autism | 16 (6.25%) |
0.967301 | Down | 54.9681 | |
|
Proteomics Studies:0
Reference | Source | Tissue | Platform | #Subjects (% Women) |
ADI-R | ADOS | Diagnosis | Normal Controls(% Women) | |
---|---|---|---|---|---|---|---|---|---|
No Evidence. |


Reference | Case Number | Family Number | de novo Number | Title |
---|---|---|---|---|
De Rubeis S, 2014 | 2270 | - | 1702 | Synaptic, transcriptional and chromatin genes disrupted in autism |
Fromer M, 2014 | - | - | 94 | De novo mutations in schizophrenia implicate synaptic networks. |




Reference | Source | Platform | ADI-R | ADOS | Diagnosis | Family | Affected | Validation Method | ||
---|---|---|---|---|---|---|---|---|---|---|
Total | Simplex | Multiplex | ||||||||
Cukier HN, 2014 | - | Illumina HiSeq 2000 | ![]() | ![]() | ASD | 40 | - | - | 100 | HumanExome BeadChip or Sanger sequencing |


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