AutismKB 2.0

Evidence Details for ODF3L2


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Basic Information Top
Gene Symbol:ODF3L2 ( C19orf19,FLJ40059,MGC129962,MGC129963 )
Gene Full Name: outer dense fiber of sperm tails 3-like 2
Band: 19p13.3
Quick LinksEntrez ID:284451; OMIM: NA; Uniprot ID:OD3L2_HUMAN; ENSEMBL ID: ENSG00000181781; HGNC ID: 26841
Relate to Another Database: SFARIGene; denovo-db
Sequences Top
>ODF3L2|284451|nucleotide
ATGGGGACCCTCAGCTGCGACTCCACCCCACGGCTGGCCACAGCCCCCCTTGGCCGGCGAGTGACGGAGGGCCAGATTCCGGAGACCGGCCTGAGGAAGTCCTGT
GGGACGGCCACCCTGGAGAACGGCTCGGGGCCAGGCTTGTATGTCCTGCCGTCCACCGTGGGCTTCATCAACCACGACTGCACCAGGGTGGCCAGTCCCGCCTAC
TCGCTCGTCCGGAGGCCCAGTGAGGCACCACCTCAGGACACCAGCCCGGGCCCCATCTACTTCTTGGACCCCAAAGTCACACGCTTTGGCCGCAGCTGCACCCCT
GCCTACTCCATGCAGGGCCGGGCCAAGTCTCGGGGTCCGGAGGTGACGCCAGGCCCTGGGGCCTACAGCCCAGAGAAGGTGCCCCCTGTGCGCCATCGGACACCG
CCGGCTTTCACCCTGGGCTGCCGCCTCCCCCTGAAGCCCCTGGACACCTCAGCCCCTGCCCCTAATGCCTACACCATGCCCCCTCTGTGGGGCTCACAGATCTTC
ACCAAGCCCAGCAGCCCCAGCTACACGGTGGTGGGCCGCACCCCCCCCGCCCGCCCCCCGCAGGATCCTGCTGAGATACCAGGCCCGGGCCAGTACGACAGCCCG
GACGCAAACACCTACCGCCAGCGCCTGCCTGCCTTCACCATGCTGGGGCGGCCCCGGGCCCCGCGACCCCTGGAGGAGACCCCCGGCCCTGGCGCCCACTGCCCA
GAGCAGGTCACCGTGAACAAAGCCAGGGCTCCAGCGTTCTCTATGGGCATCCGCCACTCGAAACGGGCCAGCACCATGGCCGCCACCACGCCCTCCCGGCCTGCG
GGGCACAGGCTGCCCGGCCGCTGCTGCTAG


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>ODF3L2|284451|protein
MGTLSCDSTPRLATAPLGRRVTEGQIPETGLRKSCGTATLENGSGPGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTP
AYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSP
DANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSMGIRHSKRASTMAATTPSRPAGHRLPGRCC


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Evidence summary Top

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Evidences Syndromic Gene GWAS CNV Linkage Association Expression NGS de novo NGS Mosaic NGS Other Low-Scale Gene Studies Total
Score (No. of Studies) No 0 (2) 1 (2) 1 (1) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 4 (5)
Syndromic Autism Gene Top
Genome-Wide Association Studies (By Ethnic Group) Top
Family Based Association Studies: 2
Reference Stage Platform #Families Affecteds Result
#Subjects
(% Women)
ADI-R ADOS Diagnosis Age
(range)
IQ
(range)
CAUCASIAN
Salyakina, 2010_2 Replication Illumina HumanHap 550K BeadChip 110 -
(-)
AS -
(3-21)
-
>70
Salyakina, 2010_1 Discovery Illumina HumanHap 550K BeadChip 124 -
(-)
AS -
(3-21)
-
>70
Case Control Based Association Studies: 0
Reference Stage Platform ASD Cases Normal Controls Result
#Subjects
(% Women)
ADI-R ADOS Diagnosis Age
(range)
IQ #Subjects
(% Women)
Age
(range)
No Evidence.
CNV Studies Top
Reference Source Method ADI-R ADOS Diagnosis Family Individual
Total Simplex Multiplex Control Affected Control Total
Bucan, 2009 USA SNP microarrayautism, ASD 912 - 912 - - 1488 1488
Pinto, 2010 - SNP microarray, qPCRASD - - - - 996 1287 2283
Linkage Studies Top