AutismKB 2.0

Evidence Details for LST-3TM12


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Basic Information Top
Gene Symbol:LST-3TM12 ( LST3 )
Gene Full Name: -
Band: 12p12.2
Quick LinksEntrez ID:338821; OMIM: NA; Uniprot ID:Q71QF0_HUMAN; ENSEMBL ID: ENSG00000205754; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Sequences Top
>LST-3TM12|338821|nucleotide
ATGAAAATATCAACCACTCAAATAGAAAGGAGATTTGAGATATCCTCTTCTCTTGTTGGTTTAATTGATGGAAGCTTCGAAATAGGAAATTTGTTTGTGATTGTA
TTTGTAAGTTACTTTGGATCTAAACTACACAGACCGAAGTTAATTGGAATTGGTTGTTTTCTTATGGGAACTGGAAGTATTTTGATGGCTTTACCACATTTCTTC
ATGGGATATTACAGGTATTCTAAAGAAACCAATATTGATCCATCAGAAAATTCAACATCAAACTTACCAAACTGTTTAATTAATCAAATGTTATCACTCAATAGA
ACACCGTCTGAGATAATAGAAAGAGGTTGTGTGAAGGAATCTGGGTCACACATGTGGATCTATGTCTTCATGGGTAATATGCTTCGTGGCATAGGGGAAACCCCC
ATAGTACCATTGGGGATTTCTTACATTGATGATTTTGCAAAAGAAGGACATTCTTCCTTGTATTTAGGTACTGTGAATGTAATGGGAATGACTGGTCTAGTTTTT
GCCTTTATGCTGGGATCTCTGTTTGCTAAAATGTATGTGGATATCGGATATGTGGATCTGAGCACTATCAGGATAACTCCTAAGGACTCTCGTTGGGTTGGAGCT
TGGTGGCTTGGTTTCCTTGTGTCTGGAATAGTATCCATTATTTCTTCTATACCATTCTTTTTCTTGCCTCTAAATCCAAATAAACCACAGAAAGAAAGGAAAGTT
TCACTATTTTTGCATGTGCTAAAAACTAATGATAAAAGGAATCAAATAGCTAATTTGACCAACCGAAGAAAATATATTACCAAAAATGTGACTGGCTTTTTCCAG
TCTTTGAAAAGCATCCTTACCAATCCCCTGTATGTTATATTTGTAATTTTTACATTGTTACACATGAGCAGCTACATTGCTTCTCTTACTTATATCATTAAAATG
GTGGAGCAACAGTATGGTTGGTCTGCATCTAAGACTAACTTTTTGTTGGGAGTCCTCGCCCTACCTGCTGTTGCAATTGGCATGTTTTCAGGAGGATATATCATT
AAAAAATTCAAATTGTCTTTAGTTGGACTTGCCAAATTGGCATTTTGTTCTGCAACAGTGCATCTCTTATCTCAAGTTTTATATTTCTTTCTAATCTGTGAAAGC
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>LST-3TM12|338821|protein
MKISTTQIERRFEISSSLVGLIDGSFEIGNLFVIVFVSYFGSKLHRPKLIGIGCFLMGTGSILMALPHFFMGYYRYSKETNIDPSENSTSNLPNCLINQMLSLNR
TPSEIIERGCVKESGSHMWIYVFMGNMLRGIGETPIVPLGISYIDDFAKEGHSSLYLGTVNVMGMTGLVFAFMLGSLFAKMYVDIGYVDLSTIRITPKDSRWVGA
WWLGFLVSGIVSIISSIPFFFLPLNPNKPQKERKVSLFLHVLKTNDKRNQIANLTNRRKYITKNVTGFFQSLKSILTNPLYVIFVIFTLLHMSSYIASLTYIIKM
VEQQYGWSASKTNFLLGVLALPAVAIGMFSGGYIIKKFKLSLVGLAKLAFCSATVHLLSQVLYFFLICESKSVAGLTLTYDGNSPVRSHVDVPLSYCNSECNCDE
SQWEPVCGNNGITYLSPCLAGCKSSSGNKEPIVFYNCSCVEVIGLQNKNYSAHLGECPRDDACTRKSYVYFVIQVLDAFLCAVGLTSYSVLVIRIVQPELKALAI
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Evidence summary Top

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Evidences Syndromic Gene GWAS CNV Linkage Association Expression NGS de novo NGS Mosaic NGS Other Low-Scale Gene Studies Total
Score (No. of Studies) No 0 (0) 1 (4) 0 (0) 0 (0) 0 (0) 0 (0) 0 (1) 0 (0) 0 (0) 2 (5)
Syndromic Autism Gene Top
Genome-Wide Association Studies(By Ethnic Group) Top
CNV Studies Top
Reference Source Method ADI-R ADOS Diagnosis Family Individual
Total Simplex Multiplex Control Affected Control Total
Bucan, 2009 USA SNP microarrayautism, ASD 912 - 912 - - 1488 1488
Pinto, 2010 - SNP microarray, qPCRASD - - - - 996 1287 2283
Levy, 2011 Simons Simplex Collection aCGH--ASD 915 915 - - - - -
Sanders, 2011 Simons Simplex Collection SNP microarray--ASD 1127 1127 - - - - -
Linkage Studies Top