Evidence Details for NDN
Basic Information Top
| Gene Symbol: | NDN ( HsT16328,PWCR ) |
|---|---|
| Gene Full Name: | necdin homolog (mouse) |
| Band: | 15q11.2 |
| Quick Links | Entrez ID:4692; OMIM: 602117; Uniprot ID:NECD_HUMAN; ENSEMBL ID: ENSG00000182636; HGNC ID: 7675 |
| Relate to Another Database: | SFARIGene; denovo-db |
Sequences Top>NDN|4692|nucleotide
ATGTCAGAACAAAGTAAGGATCTGAGCGACCCTAACTTTGCAGCCGAGGCCCCCAACTCCGAGGTGCACAGCAGCCCTGGGGTTTCGGAGGGGGTTCCTCCGTCC
GCGACCCTGGCAGAGCCGCAGAGCCCTCCTCTAGGCCCGACGGCCGCTCCGCAGGCCGCGCCGCCTCCCCAGGCCCCGAACGACGAGGGCGACCCGAAGGCCCTG
CAGCAGGCTGCGGAGGAGGGCCGCGCCCACCAGGCCCCGAGCGCGGCCCAGCCGGGCCCGGCACCGCCAGCCCCGGCGCAGCTGGTGCAGAAGGCGCACGAGCTC
ATGTGGTACGTGCTGGTCAAGGACCAGAAGAAGATGATCATCTGGTTTCCAGACATGGTGAAAGATGTCATCGGCAGCTACAAGAAGTGGTGCAGGAGCATCCTC
CGGCGCACCAGCCTCATCCTCGCCCGGGTGTTCGGGCTGCACCTGAGGCTAACCAGCCTGCACACCATGGAGTTTGCGCTGGTCAAAGCGCTGGAGCCCGAGGAG
CTGGACAGGGTGGCGCTGAGCAACCGCATGCCCATGACAGGCCTCCTGCTCATGATCCTGAGCCTCATCTACGTGAAGGGCCGCGGCGCCAGAGAGAGCGCCGTC
TGGAACGTGCTGCGCATCCTGGGGCTGCGGCCCTGGAAGAAGCACTCCACCTTCGGGGACGTGCGGAAGCTCATCACTGAGGAGTTCGTCCAAATGAATTACCTG
AAGTACCAGCGCGTCCCATACGTGGAGCCGCCCGAATACGAGTTCTTTTGGGGCTCCCGGGCCAGCCGCGAAATCACCAAGATGCAAATCATGGAGTTCCTGGCC
AGGGTCTTTAAGAAAGACCCCCAGGCCTGGCCCTCCCGATACAGAGAAGCTCTGGAGGAGGCCAGAGCTCTGCGGGAGGCTAATCCCACTGCCCACTACCCTCGC
AGCAGTGTCTCTGAGGACTAG
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ATGTCAGAACAAAGTAAGGATCTGAGCGACCCTAACTTTGCAGCCGAGGCCCCCAACTCCGAGGTGCACAGCAGCCCTGGGGTTTCGGAGGGGGTTCCTCCGTCC
GCGACCCTGGCAGAGCCGCAGAGCCCTCCTCTAGGCCCGACGGCCGCTCCGCAGGCCGCGCCGCCTCCCCAGGCCCCGAACGACGAGGGCGACCCGAAGGCCCTG
CAGCAGGCTGCGGAGGAGGGCCGCGCCCACCAGGCCCCGAGCGCGGCCCAGCCGGGCCCGGCACCGCCAGCCCCGGCGCAGCTGGTGCAGAAGGCGCACGAGCTC
ATGTGGTACGTGCTGGTCAAGGACCAGAAGAAGATGATCATCTGGTTTCCAGACATGGTGAAAGATGTCATCGGCAGCTACAAGAAGTGGTGCAGGAGCATCCTC
CGGCGCACCAGCCTCATCCTCGCCCGGGTGTTCGGGCTGCACCTGAGGCTAACCAGCCTGCACACCATGGAGTTTGCGCTGGTCAAAGCGCTGGAGCCCGAGGAG
CTGGACAGGGTGGCGCTGAGCAACCGCATGCCCATGACAGGCCTCCTGCTCATGATCCTGAGCCTCATCTACGTGAAGGGCCGCGGCGCCAGAGAGAGCGCCGTC
TGGAACGTGCTGCGCATCCTGGGGCTGCGGCCCTGGAAGAAGCACTCCACCTTCGGGGACGTGCGGAAGCTCATCACTGAGGAGTTCGTCCAAATGAATTACCTG
AAGTACCAGCGCGTCCCATACGTGGAGCCGCCCGAATACGAGTTCTTTTGGGGCTCCCGGGCCAGCCGCGAAATCACCAAGATGCAAATCATGGAGTTCCTGGCC
AGGGTCTTTAAGAAAGACCCCCAGGCCTGGCCCTCCCGATACAGAGAAGCTCTGGAGGAGGCCAGAGCTCTGCGGGAGGCTAATCCCACTGCCCACTACCCTCGC
AGCAGTGTCTCTGAGGACTAG
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>NDN|4692|protein
MSEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHEL
MWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILSLIYVKGRGARESAV
WNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEEARALREANPTAHYPR
SSVSED
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MSEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHEL
MWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILSLIYVKGRGARESAV
WNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEEARALREANPTAHYPR
SSVSED
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Evidence summary TopClick the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
| Evidences | Syndromic Gene | GWAS | CNV | Linkage | Association | Expression | NGS de novo | NGS Mosaic | NGS Other | Low-Scale Gene Studies | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Score (No. of Studies) | No | 0 (0) | 2 (16) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 4 (16) |
Syndromic Autism Gene TopGenome-Wide Association Studies(By Ethnic Group) TopCNV Studies Top| Reference | Source | Method | ADI-R | ADOS | Diagnosis | Family | Individual | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Total | Simplex | Multiplex | Control | Affected | Control | Total | ||||||
| Wolpert, 2000 | - | STS mapping |  |  | autism | 3 | - | 3 | - | 3 | - | 3 |
| Wassink, 2001 | USA | Chromosomal analysis of G-band | | | autism | - | - | - | - | 278 | - | 278 |
| Silva, 2002 | - | FISH | | | autism | - | - | - | - | 1 | - | 1 |
| Keller, 2003 | USA | FISH | | | ASD | - | - | - | - | 2 | - | 2 |
| Sahoo, 2005 | USA | aCGH | | | autism | - | - | - | - | 9 | - | 9 |
| Wassink, 2007 | USA | FISH | | | PDD | - | - | - | - | 104 | - | 104 |
| Sebat, 2007 | USA | aCGH | | | autism | 165 | 118 | 47 | 99 | 195 | 196 | 391 |
| Weiss, 2008 | USA, Ireland | aCGH, SNP microarray | | | ASD | 751 | - | - | - | 2252 | 23502 | 25754 |
| Marshall, 2008 | - | SNP microarray | | | ASD | 427 | 238 | 189 | - | 427 | 500 | 927 |
| Christian, 2008 | USA | aCGH | | | ASD | 397 | 35 | 362 | - | 397 | 372 | 769 |
| Bucan, 2009 | USA | SNP microarray | | | autism, ASD | 912 | - | 912 | - | - | 1488 | 1488 |
| Gregory, 2009 | USA | aCGH | | | ASD | - | - | - | - | 119 | 54 | 173 |
| Bremer, 2009 | - | aCGH | | | ASD | - | - | - | - | 148 | - | 148 |
| Pinto, 2010 | - | SNP microarray, qPCR | | | ASD | - | - | - | - | 996 | 1287 | 2283 |
| Levy, 2011 | Simons Simplex Collection | aCGH | - | - | ASD | 915 | 915 | - | - | - | - | - |
| Sanders, 2011 | Simons Simplex Collection | SNP microarray | - | - | ASD | 1127 | 1127 | - | - | - | - | - |
Linkage Studies TopLow Scale Association Studies (by Ethnic Group) TopLarge Scale Expression Studies TopNGS de novo Mutation Studies TopNGS Mosaic SNV Studies TopNGS Other Studies Top Low Scale Gene Studies TopContact Us if you are an author of a study regarding this gene and do not find your study in this table or find errors in the representation of your study details.